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{{CL
{{CL
|id=CL:0002262
|alt_id=CL:1000403
|name=endothelial cell of sinusoid
|namespace=cell
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|xref=FMA:63134
|is_a=CL:0000115
|synonym=
|comment=
|comment=
|alt_id=CL:1000403
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-14T10:57:26Z
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002262
|is_a=CL:0000115
|is_obsolete=
|located_in=
|located_in=
|name=endothelial cell of sinusoid
|namespace=FANTOM
|obo_creation_date=2010-09-14T10:57:26Z
|part_of=UBERON:0003909
|part_of=UBERON:0003909
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=FMA:63134
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:endothelial cell of sinusoid
Namespace:FANTOM
Definition:"An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:
FMA:63134
Alt_id: CL:1000403
Created by:tmeehan
Creation date:2010-09-14T10:57:26Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000115(endothelial cell)
part_of:UBERON:0003909(sinusoid)



Children


is a:CL:1000398 (endothelial cell of hepatic sinusoid)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002262 (endothelial cell of sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_f7085926695310bcdd36d5f7658fb7b6p4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_f7085926695310bcdd36d5f7658fb7b6p6@Adamts1
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_f7085926695310bcdd36d5f7658fb7b6p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_f7085926695310bcdd36d5f7658fb7b6p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_f7085926695310bcdd36d5f7658fb7b6p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_f7085926695310bcdd36d5f7658fb7b6p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_f7085926695310bcdd36d5f7658fb7b6p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_f7085926695310bcdd36d5f7658fb7b6p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_f7085926695310bcdd36d5f7658fb7b6p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_f7085926695310bcdd36d5f7658fb7b6p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_f7085926695310bcdd36d5f7658fb7b6p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_f7085926695310bcdd36d5f7658fb7b6p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:43407825..43407830, +
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_f7085926695310bcdd36d5f7658fb7b6p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_f7085926695310bcdd36d5f7658fb7b6p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106749..35106752, -

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