DOID:5409: Difference between revisions

Latest revision as of 16:52, 12 September 2014

lung small cell carcinoma

Namespace:

FANTOM

Xrefs:

Synonyms:

"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]

Comments:

OMIM mapping confirmed by DO. [SN].

Ontology association Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies. link to ontology dataset data

Parents

is_a:	DOID:3905(lung carcinoma)

Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Show entries

Search:

P-value	FFCP	Short description
1.55e-98	FFCP PHASE2:Hg19::chr6:125378873..125378876,+	p@chr6:125378873..125378876, +
1.55e-98	FFCP PHASE1:Hg19::chr6:125378873..125378876,+	p@chr6:125378873..125378876, +
2.4e-66	FFCP PHASE2:Hg19::chr8:40525350..40525354,-	p@chr8:40525350..40525354, -
2.4e-66	FFCP PHASE1:Hg19::chr8:40525350..40525354,-	p@chr8:40525350..40525354, -
3.1e-50	FFCP PHASE1:Hg19::chr7:79840117..79840122,+	p@chr7:79840117..79840122, +
3.1e-50	FFCP PHASE1:Hg19::chr17:79973593..79973633,-	p@chr17:79973593..79973633, -
3.1e-50	FFCP PHASE1:Hg19::chr12:84664662..84664670,+	p3@ENST00000547882
3.1e-50	FFCP PHASE1:Hg19::chr10:29213612..29213644,+	p@chr10:29213612..29213644, +
3.1e-50	FFCP PHASE1:Hg19::chr5:146890999..146891017,-	p@chr5:146890999..146891017, -
3.1e-50	FFCP PHASE1:Hg19::chr2:238385078..238385087,-	p@chr2:238385078..238385087, -
3.1e-50	FFCP PHASE2:Hg19::chr9:226208..226216,-	p@chr9:226208..226216, -
3.1e-50	FFCP PHASE2:Hg19::chr7:120379758..120379765,+	p@chr7:120379758..120379765, +
3.1e-50	FFCP PHASE2:Hg19::chr2:220695661..220695670,+	p@chr2:220695661..220695670, +
3.1e-50	FFCP PHASE1:Hg19::chr8:98108427..98108430,-	p@chr8:98108427..98108430, -
3.1e-50	FFCP PHASE1:Hg19::chr8:39970826..39970832,+	p@chr8:39970826..39970832, +
3.1e-50	FFCP PHASE2:Hg19::chr2:97626065..97626084,-	p@chr2:97626065..97626084, -
3.1e-50	FFCP PHASE1:Hg19::chr10:82723188..82723191,-	p@chr10:82723188..82723191, -
3.1e-50	FFCP PHASE2:Hg19::chr12:84664687..84664694,+	p4@ENST00000547882
3.1e-50	FFCP PHASE1:Hg19::chr12:58158560..58158567,-	p@chr12:58158560..58158567, -
3.1e-50	FFCP PHASE1:Hg19::chr3:86289712..86289720,+	p@chr3:86289712..86289720, +
3.1e-50	FFCP PHASE2:Hg19::chr6:169224860..169224875,+	p@chr6:169224860..169224875, +
3.1e-50	FFCP PHASE2:Hg19::chr18:39258990..39258996,-	p@chr18:39258990..39258996, -
3.1e-50	FFCP PHASE1:Hg19::chr7:79840323..79840338,+	p@chr7:79840323..79840338, +
3.1e-50	FFCP PHASE1:Hg19::chr4:3838289..3838308,-	p@chr4:3838289..3838308, -
3.1e-50	FFCP PHASE2:Hg19::chr8:72275738..72275747,-	p@chr8:72275738..72275747, -
3.1e-50	FFCP PHASE1:Hg19::chr1:144618112..144618116,+	p4@NBPF8
3.1e-50	FFCP PHASE2:Hg19::chr3:86701885..86701893,-	p@chr3:86701885..86701893, -
3.1e-50	FFCP PHASE2:Hg19::chr19:7834829..7834834,+	p@chr19:7834829..7834834, +
3.1e-50	FFCP PHASE2:Hg19::chr14:59132994..59133018,+	p@chr14:59132994..59133018, +
3.1e-50	FFCP PHASE1:Hg19::chr8:98051049..98051058,-	p@chr8:98051049..98051058, -
3.1e-50	FFCP PHASE2:Hg19::chr7:79840127..79840130,+	p@chr7:79840127..79840130, +
3.1e-50	FFCP PHASE2:Hg19::chr21:16662950..16662957,-	p@chr21:16662950..16662957, -
3.1e-50	FFCP PHASE2:Hg19::chr17:79973593..79973633,-	p@chr17:79973593..79973633, -
3.1e-50	FFCP PHASE2:Hg19::chr12:79756349..79756364,-	p@chr12:79756349..79756364, -
3.1e-50	FFCP PHASE2:Hg19::chr9:9763035..9763040,-	p@chr9:9763035..9763040, -
3.1e-50	FFCP PHASE2:Hg19::chr2:23850222..23850227,+	p@chr2:23850222..23850227, +
3.1e-50	FFCP PHASE1:Hg19::chr8:57525935..57525942,+	p@chr8:57525935..57525942, +
3.1e-50	FFCP PHASE1:Hg19::chr4:160189282..160189289,+	p38@RAPGEF2
3.1e-50	FFCP PHASE2:Hg19::chr8:98108435..98108438,-	p@chr8:98108435..98108438, -
3.1e-50	FFCP PHASE1:Hg19::chr2:103235211..103235247,+	p@chr2:103235211..103235247, +
3.1e-50	FFCP PHASE2:Hg19::chr6:45399278..45399287,+	p@chr6:45399278..45399287, +
3.1e-50	FFCP PHASE2:Hg19::chr6:154710410..154710428,-	p@chr6:154710410..154710428, -
3.1e-50	FFCP PHASE1:Hg19::chr20:54101133..54101144,+	p@chr20:54101133..54101144, +
3.1e-50	FFCP PHASE2:Hg19::chr8:100549773..100549807,-	p@chr8:100549773..100549807, -
3.1e-50	FFCP PHASE2:Hg19::chr7:26657673..26657685,-	p@chr7:26657673..26657685, -
3.1e-50	FFCP PHASE1:Hg19::chr3:95401928..95401936,-	p3@ENST00000494840, p3@uc003dro.1
3.1e-50	FFCP PHASE1:Hg19::chr2:135170047..135170048,+	p@chr2:135170047..135170048, +
3.1e-50	FFCP PHASE2:Hg19::chr8:57526601..57526612,+	p@chr8:57526601..57526612, +
3.1e-50	FFCP PHASE2:Hg19::chr6:998897..998898,-	p@chr6:998897..998898, -
3.1e-50	FFCP PHASE1:Hg19::chr12:15722105..15722121,+	p@chr12:15722105..15722121, +
3.1e-50	FFCP PHASE2:Hg19::chr2:103235329..103235342,+	p@chr2:103235329..103235342, +
3.1e-50	FFCP PHASE1:Hg19::chr8:97962018..97962029,-	p@chr8:97962018..97962029, -
3.1e-50	FFCP PHASE1:Hg19::chr14:36966895..36966899,-	p@chr14:36966895..36966899, -
3.1e-50	FFCP PHASE2:Hg19::chr10:129704395..129704457,+	p@chr10:129704395..129704457, +
3.1e-50	FFCP PHASE2:Hg19::chr8:97961177..97961185,-	p@chr8:97961177..97961185, -
3.1e-50	FFCP PHASE1:Hg19::chr1:168756151..168756165,+	p2@ENST00000420691
3.1e-50	FFCP PHASE2:Hg19::chr4:39301903..39301910,-	p@chr4:39301903..39301910, -
3.1e-50	FFCP PHASE2:Hg19::chr12:133040060..133040064,+	p@chr12:133040060..133040064, +
3.1e-50	FFCP PHASE1:Hg19::chr6:64762702..64762707,+	p@chr6:64762702..64762707, +
3.1e-50	FFCP PHASE2:Hg19::chr8:98065877..98065881,-	p@chr8:98065877..98065881, -
3.1e-50	FFCP PHASE2:Hg19::chr6:140771120..140771128,+	p@chr6:140771120..140771128, +
3.1e-50	FFCP PHASE1:Hg19::chr15:71685918..71685922,-	p@chr15:71685918..71685922, -
3.1e-50	FFCP PHASE1:Hg19::chr1:219599419..219599426,-	p@chr1:219599419..219599426, -
3.1e-50	FFCP PHASE2:Hg19::chr7:26482694..26482710,-	p@chr7:26482694..26482710, -
3.1e-50	FFCP PHASE1:Hg19::chr7:120383546..120383560,+	p@chr7:120383546..120383560, +
3.1e-50	FFCP PHASE1:Hg19::chr2:91776712..91776739,+	p@chr2:91776712..91776739, +
3.1e-50	FFCP PHASE1:Hg19::chr17:39140411..39140419,-	p5@KRT40
3.1e-50	FFCP PHASE2:Hg19::chr20:45418126..45418131,-	p@chr20:45418126..45418131, -
3.1e-50	FFCP PHASE2:Hg19::chr13:76694533..76694542,+	p@chr13:76694533..76694542, +
3.1e-50	FFCP PHASE1:Hg19::chr2:97626550..97626562,-	p@chr2:97626550..97626562, -
3.1e-50	FFCP PHASE2:Hg19::chr6:31681859..31681865,-	p3@LY6G6E
3.1e-50	FFCP PHASE2:Hg19::chr2:222127471..222127478,-	p@chr2:222127471..222127478, -
3.1e-50	FFCP PHASE1:Hg19::chr12:51116443..51116452,+	p@chr12:51116443..51116452, +
3.1e-50	FFCP PHASE1:Hg19::chr11:69640133..69640140,+	p@chr11:69640133..69640140, +
3.1e-50	FFCP PHASE2:Hg19::chr3:1991867..1991875,-	p@chr3:1991867..1991875, -
3.1e-50	FFCP PHASE2:Hg19::chr2:97626442..97626445,-	p@chr2:97626442..97626445, -
3.1e-50	FFCP PHASE2:Hg19::chr21:38295313..38295326,-	p@chr21:38295313..38295326, -
3.1e-50	FFCP PHASE2:Hg19::chr4:81460545..81460547,-	p@chr4:81460545..81460547, -
3.1e-50	FFCP PHASE1:Hg19::chr13:76688920..76688924,+	p@chr13:76688920..76688924, +
3.1e-50	FFCP PHASE2:Hg19::chr2:241625475..241625482,+	p8@ENST00000407635
3.1e-50	FFCP PHASE1:Hg19::chr12:65516484..65516493,-	p@chr12:65516484..65516493, -
3.1e-50	FFCP PHASE1:Hg19::chr10:129703377..129703388,+	p@chr10:129703377..129703388, +
3.1e-50	FFCP PHASE2:Hg19::chr1:168756303..168756308,+	p1@MGC4473
3.1e-50	FFCP PHASE1:Hg19::chr9:17454052..17454060,+	p@chr9:17454052..17454060, +
3.1e-50	FFCP PHASE1:Hg19::chr6:23637711..23637717,-	p@chr6:23637711..23637717, -
3.1e-50	FFCP PHASE1:Hg19::chr3:86703154..86703166,-	p@chr3:86703154..86703166, -
3.1e-50	FFCP PHASE1:Hg19::chr2:220594710..220594720,+	p3@ENST00000442416
3.1e-50	FFCP PHASE2:Hg19::chr9:129234745..129234747,-	p@chr9:129234745..129234747, -
3.1e-50	FFCP PHASE1:Hg19::chr1:100110807..100110818,+	p@chr1:100110807..100110818, +
3.1e-50	FFCP PHASE1:Hg19::chr14:60958049..60958051,-	p@chr14:60958049..60958051, -
3.1e-50	FFCP PHASE2:Hg19::chr15:62007373..62007374,-	p2@ENST00000559590
3.1e-50	FFCP PHASE1:Hg19::chr17:79970753..79970763,+	p15@ASPSCR1
3.1e-50	FFCP PHASE2:Hg19::chr5:79097476..79097484,+	p@chr5:79097476..79097484, +
3.1e-50	FFCP PHASE1:Hg19::chr12:84126726..84126727,-	p@chr12:84126726..84126727, -
3.1e-50	FFCP PHASE2:Hg19::chr1:199134722..199134729,+	p@chr1:199134722..199134729, +
3.1e-50	FFCP PHASE1:Hg19::chr2:97626013..97626024,+	p@chr2:97626013..97626024, +
3.1e-50	FFCP PHASE2:Hg19::chr9:17454062..17454088,+	p@chr9:17454062..17454088, +
3.1e-50	FFCP PHASE2:Hg19::chr7:111234799..111234807,-	p@chr7:111234799..111234807, -
3.1e-50	FFCP PHASE2:Hg19::chr4:185426203..185426209,-	p@chr4:185426203..185426209, -
3.1e-50	FFCP PHASE2:Hg19::chr3:86703174..86703181,-	p@chr3:86703174..86703181, -

Showing 1 to 100 of 100 entries

@@ Line 1: / Line 1: @@
 {{DOID
-|id=DOID:5409
+|alt_id=
-|name=lung small cell carcinoma
-|namespace=disease_ontology
-|def=
-|xref=MSH:D055752;;NCI:C4917;;OMIM:182280;;SNOMEDCT_2010_1_31:254632001;;SNOMEDCT_2010_1_31:254633006;;UMLS_CUI:C0149925
-|is_a=DOID:3905
-|synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006];;"SCLC" EXACT [CSP2005:2017-6589];;"small cell carcinoma of lung" RELATED [];;"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001];;"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
 |comment=OMIM mapping confirmed by DO. [SN].
-|alt_id=
-|disjoint_from=
-|union_of=
 |created_by=
-|obo_creation_date=
+|def=
-|subset=
-|adjacent_to=
 |derives_from=
 |develops_from=
+|disjoint_from=
 |has_quality=
+|id=DOID:5409
+|is_a=DOID:3905
+|is_obsolete=
 |located_in=
+|name=lung small cell carcinoma
+|namespace=FANTOM
+|obo_creation_date=
 |part_of=
+|preceded_by=
 |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
-|is_obsolete=
+|subset=
-|preceded_by=
+|synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006];;"SCLC" EXACT [CSP2005:2017-6589];;"small cell carcinoma of lung" RELATED [];;"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001];;"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
+|union_of=
+|xref=MSH:D055752;;NCI:C4917;;OMIM:182280;;SNOMEDCT_2010_1_31:254632001;;SNOMEDCT_2010_1_31:254633006;;UMLS_CUI:C0149925
 }}

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DOID:5409: Difference between revisions

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Latest revision as of 16:52, 12 September 2014

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