DOID:5409: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=lung small cell carcinoma | |name=lung small cell carcinoma | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:52, 12 September 2014
| Name: | lung small cell carcinoma | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: |
"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006] "SCLC" EXACT [CSP2005:2017-6589] "small cell carcinoma of lung" RELATED [] "small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001] "small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
| Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3905(lung carcinoma) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626442..97626445, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:23850233..23850248,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:23850233..23850248, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:46124855..46124858, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:60194459..60194462,-#_5be4114e7d0131f457d60e83d77a108d | p43@RTN1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:226208..226216,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:226208..226216, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:120379758..120379765,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120379758..120379765, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:154729003..154729006,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154729003..154729006, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:220695661..220695670,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:220695661..220695670, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:25326297..25326305,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:25326297..25326305, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:84664736..84664743,+#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000547882 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:29212181..29212188,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:29212181..29212188, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_5be4114e7d0131f457d60e83d77a108d | p@chr5:6961030..6961034, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:97626065..97626084,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626065..97626084, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:76549637..76549662,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76549637..76549662, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:72938203..72938230, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:86701902..86701920,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86701902..86701920, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:60194446..60194457,-#_5be4114e7d0131f457d60e83d77a108d | p16@RTN1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:125378772..125378777,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:125378772..125378777, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:169224860..169224875,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:169224860..169224875, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:33705218..33705225,-#_5be4114e7d0131f457d60e83d77a108d | p@chr1:33705218..33705225, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:39258990..39258996,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:39258990..39258996, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_5be4114e7d0131f457d60e83d77a108d | p1@ENST00000547882 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:76554315..76554319,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76554315..76554319, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:58158560..58158567,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:58158560..58158567, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:60194043..60194066,-#_5be4114e7d0131f457d60e83d77a108d | p18@RTN1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98066259..98066270,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98066259..98066270, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:72275738..72275747,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:72275738..72275747, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:86701885..86701893,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86701885..86701893, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:7834829..7834834,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:7834829..7834834, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:26482715..26482738,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26482715..26482738, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:33619040..33619056,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:33619040..33619056, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:79840127..79840130,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840127..79840130, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:115898365..115898379,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:115898365..115898379, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:16662950..16662957,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:16662950..16662957, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:181360250..181360259,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:181360250..181360259, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:70939741..70939790,-#_5be4114e7d0131f457d60e83d77a108d | p@chr17:70939741..70939790, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:79973593..79973633,-#_5be4114e7d0131f457d60e83d77a108d | p@chr17:79973593..79973633, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:66088105..66088108,-#_5be4114e7d0131f457d60e83d77a108d | p@chr16:66088105..66088108, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:115999570..115999575,+#_5be4114e7d0131f457d60e83d77a108d | p9@VWA2 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:9763035..9763040,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:9763035..9763040, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:78334430..78334433,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:78334430..78334433, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:202413051..202413061,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:202413051..202413061, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:23850222..23850227,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:23850222..23850227, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:20538015..20538023,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:20538015..20538023, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:57021818..57021822,+#_5be4114e7d0131f457d60e83d77a108d | p@chr14:57021818..57021822, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:65730100..65730104,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:65730100..65730104, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98108435..98108438,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98108435..98108438, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:45399278..45399287,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:45399278..45399287, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:154710410..154710428,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154710410..154710428, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:100549773..100549807,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:100549773..100549807, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:26657673..26657685,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26657673..26657685, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:41749788..41749795,-#_5be4114e7d0131f457d60e83d77a108d | p10@PHOX2B |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:234862409..234862414,+#_5be4114e7d0131f457d60e83d77a108d | p14@TRPM8 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:103235329..103235342,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235329..103235342, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:10085817..10085825, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129704512..129704515,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704512..129704515, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:135761770..135761786,-#_5be4114e7d0131f457d60e83d77a108d | p@chrX:135761770..135761786, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:21209872..21209910,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:21209872..21209910, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:241625540..241625541,+#_5be4114e7d0131f457d60e83d77a108d | p14@ENST00000407635 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:58979826..58979836, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:15722105..15722121,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:15722105..15722121, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:97961177..97961185,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97961177..97961185, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:39301903..39301910, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:1643561..1643566,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:1643561..1643566, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98065877..98065881,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98065877..98065881, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:140771120..140771128, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:51255348..51255351,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:51255348..51255351, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26482694..26482710, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:222160741..222160750,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222160741..222160750, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:13010455..13010466,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:13010455..13010466, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:89802926..89802934,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:89802926..89802934, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:58415850..58415853,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:58415850..58415853, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:97965705..97965721,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97965705..97965721, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:57526601..57526612,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57526601..57526612, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:998897..998898, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:129513919..129513922,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:129513919..129513922, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:65516484..65516493,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:65516484..65516493, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:10852011..10852021,-#_5be4114e7d0131f457d60e83d77a108d | p27@MID1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626588..97626595,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626588..97626595, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:45418126..45418131,-#_5be4114e7d0131f457d60e83d77a108d | p@chr20:45418126..45418131, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:50553120..50553126,-#_5be4114e7d0131f457d60e83d77a108d | p@chr16:50553120..50553126, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:41519057..41519065,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:41519057..41519065, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:154858754..154858762,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154858754..154858762, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:31681859..31681865,-#_5be4114e7d0131f457d60e83d77a108d | p3@LY6G6E |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:222127471..222127478,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222127471..222127478, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:37420947..37420953, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:36850273..36850276,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:36850273..36850276, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:39018314..39018323, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:1991867..1991875,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:1991867..1991875, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626442..97626445, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:38295313..38295326,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:38295313..38295326, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:7411388..7411391, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:76755731..76755739,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76755731..76755739, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129703430..129703445,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703430..129703445, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:51116443..51116452,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:51116443..51116452, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:69640133..69640140,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:69640133..69640140, + |
