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{{UBERON
{{UBERON
|id=UBERON:0001136
|alt_id=UBERON:FMA_14074-MA_0000565
|name=mesothelium
|namespace=
|def="Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri)." [Wikipedia:Mesothelium]
|xref=AEO:0000111;;BTO:0002422;;EHDAA2:0003111;;EHDAA:2331;;EHDAA:2339;;EHDAA:2349;;EHDAA:295;;EHDAA:6073;;EHDAA:640;;EHDAA:646;;FMA:14074;;http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg;;MA:0000565;;ncithesaurus:Mesothelium;;SCTID:361918002
|is_a=UBERON:0000487;;UBERON:0004120
|synonym="meso-epithelium" EXACT []
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_14074-MA_0000565
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri)." [Wikipedia:Mesothelium]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=UBERON:0000926
|develops_from=UBERON:0000926
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001136
|is_a=UBERON:0000487 ;;UBERON:0012275
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=mesothelium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000042
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="meso-epithelium" EXACT []
|union_of=
|xref=AEO:0000111;;BTO:0002422;;EHDAA2:0003111;;EHDAA:2331;;EHDAA:2339;;EHDAA:2349;;EHDAA:295;;EHDAA:6073;;EHDAA:640;;EHDAA:646;;FMA:14074;;http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg;;MA:0000565;;ncithesaurus:Mesothelium;;SCTID:361918002
}}
}}

Latest revision as of 17:16, 12 September 2014

Name:mesothelium
Namespace:FANTOM
Definition:"Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri)." [Wikipedia:Mesothelium]
Xrefs:
links:

AEO:0000111
BTO:0002422
EHDAA2:0003111
EHDAA:2331
EHDAA:2339
EHDAA:2349
EHDAA:295
EHDAA:6073
EHDAA:640
EHDAA:646
FMA:14074
[1]
MA:0000565
ncithesaurus:Mesothelium

SCTID:361918002
Synonyms: "meso-epithelium" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_14074-MA_0000565
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000487(simple squamous epithelium),UBERON:0012275(meso-epithelium)
develops_from:UBERON:0000926(mesoderm)
part_of:UBERON:0000042(serous membrane)



Children

is a:UBERON:0004813 (seminiferous tubule epithelium),FF:0011160 (mesothelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001136 (mesothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_a1e7ae798f4d3f68621c4ad5d6d05184p26@BDNF
5.42e-195FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_a1e7ae798f4d3f68621c4ad5d6d05184p26@BDNF
9.37e-99FFCP PHASE2:Hg19::chr3:158450428..158450431,-#_6ef1768d57f4b9e11eb86c1dd4d72a78p9@RARRES1
9.37e-99FFCP PHASE2:Hg19::chr1:227505905..227505906,-#_6ef1768d57f4b9e11eb86c1dd4d72a78p43@CDC42BPA
9.37e-99FFCP PHASE1:Hg19::chr1:227505905..227505906,-#_6ef1768d57f4b9e11eb86c1dd4d72a78p43@CDC42BPA
9.37e-99FFCP PHASE1:Hg19::chr3:158450428..158450431,-#_6ef1768d57f4b9e11eb86c1dd4d72a78p9@RARRES1
2.55e-98FFCP PHASE2:Hg19::chr3:193356854..193356864,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr3:193356854..193356864, +
2.55e-98FFCP PHASE2:Hg19::chr3:170430340..170430344,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr3:170430340..170430344, +
2.55e-98FFCP PHASE2:Hg19::chr19:54600897..54600899,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr19:54600897..54600899, +
2.55e-98FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_f4b69f5dadb5a8c612721a54183eba3ep7@C7orf63
2.55e-98FFCP PHASE1:Hg19::chr8:69832864..69832865,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr8:69832864..69832865, +
2.55e-98FFCP PHASE2:Hg19::chr19:40320572..40320586,-#_f4b69f5dadb5a8c612721a54183eba3ep@chr19:40320572..40320586, -
2.55e-98FFCP PHASE1:Hg19::chr19:54600897..54600899,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr19:54600897..54600899, +
2.55e-98FFCP PHASE1:Hg19::chr19:40320572..40320586,-#_f4b69f5dadb5a8c612721a54183eba3ep@chr19:40320572..40320586, -
2.55e-98FFCP PHASE1:Hg19::chr13:53030077..53030083,-#_f4b69f5dadb5a8c612721a54183eba3ep@chr13:53030077..53030083, -
2.55e-98FFCP PHASE2:Hg19::chr8:47529304..47529311,-#_f4b69f5dadb5a8c612721a54183eba3ep@chr8:47529304..47529311, -
2.55e-98FFCP PHASE1:Hg19::chr7:18206831..18206833,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr7:18206831..18206833, +
2.55e-98FFCP PHASE1:Hg19::chr3:193356854..193356864,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr3:193356854..193356864, +
2.55e-98FFCP PHASE1:Hg19::chr3:170430340..170430344,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr3:170430340..170430344, +
2.55e-98FFCP PHASE1:Hg19::chr2:9519086..9519101,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr2:9519086..9519101, +
2.55e-98FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_f4b69f5dadb5a8c612721a54183eba3ep7@C7orf63
2.55e-98FFCP PHASE2:Hg19::chr8:69832864..69832865,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr8:69832864..69832865, +
2.55e-98FFCP PHASE2:Hg19::chr13:53030077..53030083,-#_f4b69f5dadb5a8c612721a54183eba3ep@chr13:53030077..53030083, -
2.55e-98FFCP PHASE2:Hg19::chr7:18206831..18206833,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr7:18206831..18206833, +
2.55e-98FFCP PHASE1:Hg19::chr8:47529304..47529311,-#_f4b69f5dadb5a8c612721a54183eba3ep@chr8:47529304..47529311, -
2.55e-98FFCP PHASE2:Hg19::chr2:9519086..9519101,+#_f4b69f5dadb5a8c612721a54183eba3ep@chr2:9519086..9519101, +
1.23e-66FFCP PHASE2:Hg19::chr2:19551668..19551679,-#_09a294c935263175636368806d7a529fp@chr2:19551668..19551679, -
1.23e-66FFCP PHASE1:Hg19::chr2:19551668..19551679,-#_09a294c935263175636368806d7a529fp@chr2:19551668..19551679, -
2.39e-66FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_db9489b3800dcc10d5ef4761956aceb3p@chr2:72803155..72803204, -
2.39e-66FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_db9489b3800dcc10d5ef4761956aceb3p@chr3:112931461..112931474, -
2.39e-66FFCP PHASE1:Hg19::chr7:98445585..98445594,-#_db9489b3800dcc10d5ef4761956aceb3p22@TMEM130
2.39e-66FFCP PHASE2:Hg19::chr1:197889533..197889548,+#_db9489b3800dcc10d5ef4761956aceb3p@chr1:197889533..197889548, +
2.39e-66FFCP PHASE1:Hg19::chr1:197889533..197889548,+#_db9489b3800dcc10d5ef4761956aceb3p@chr1:197889533..197889548, +
2.39e-66FFCP PHASE1:Hg19::chr12:15815732..15815744,-#_db9489b3800dcc10d5ef4761956aceb3p21@EPS8
2.39e-66FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_db9489b3800dcc10d5ef4761956aceb3p@chr3:112931461..112931474, -
2.39e-66FFCP PHASE2:Hg19::chr12:15815732..15815744,-#_db9489b3800dcc10d5ef4761956aceb3p21@EPS8
2.39e-66FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_db9489b3800dcc10d5ef4761956aceb3p@chr2:72803155..72803204, -
2.39e-66FFCP PHASE2:Hg19::chr7:98445585..98445594,-#_db9489b3800dcc10d5ef4761956aceb3p22@TMEM130
4.66e-66FFCP PHASE2:Hg19::chr21:48080873..48080878,+#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr21:48080873..48080878, +
4.66e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr5:75912402..75912418, -
4.66e-66FFCP PHASE2:Hg19::chr3:99984127..99984138,+#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr3:99984127..99984138, +
4.66e-66FFCP PHASE1:Hg19::chr3:170916991..170916995,-#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr3:170916991..170916995, -
4.66e-66FFCP PHASE1:Hg19::chr21:48080873..48080878,+#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr21:48080873..48080878, +
4.66e-66FFCP PHASE1:Hg19::chr10:1034666..1034675,+#_8b948bdd7c803c5f0e2e749d526d7ef2p4@GTPBP4
4.66e-66FFCP PHASE2:Hg19::chr10:1034666..1034675,+#_8b948bdd7c803c5f0e2e749d526d7ef2p4@GTPBP4
4.66e-66FFCP PHASE2:Hg19::chr5:90830481..90830492,+#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr5:90830481..90830492, +
4.66e-66FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_8b948bdd7c803c5f0e2e749d526d7ef2p38@PTK2
4.66e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr5:75912402..75912418, -
4.66e-66FFCP PHASE1:Hg19::chr3:99984127..99984138,+#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr3:99984127..99984138, +
4.66e-66FFCP PHASE2:Hg19::chr3:170916991..170916995,-#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr3:170916991..170916995, -
4.66e-66FFCP PHASE1:Hg19::chr5:90830481..90830492,+#_8b948bdd7c803c5f0e2e749d526d7ef2p@chr5:90830481..90830492, +
4.66e-66FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_8b948bdd7c803c5f0e2e749d526d7ef2p38@PTK2
1.46e-50FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_7ac18b32ce871d6e5e3a2619e3b7b2f7p8@TCF21
1.46e-50FFCP PHASE1:Hg19::chr11:114173606..114173612,+#_7ac18b32ce871d6e5e3a2619e3b7b2f7p@chr11:114173606..114173612, +
1.46e-50FFCP PHASE2:Hg19::chr11:114173606..114173612,+#_7ac18b32ce871d6e5e3a2619e3b7b2f7p@chr11:114173606..114173612, +
1.46e-50FFCP PHASE1:Hg19::chr2:177009137..177009140,+#_7ac18b32ce871d6e5e3a2619e3b7b2f7p@chr2:177009137..177009140, +
1.46e-50FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_7ac18b32ce871d6e5e3a2619e3b7b2f7p8@TCF21
1.46e-50FFCP PHASE2:Hg19::chr2:177009137..177009140,+#_7ac18b32ce871d6e5e3a2619e3b7b2f7p@chr2:177009137..177009140, +
2.42e-50FFCP PHASE1:Hg19::chr2:55459485..55459491,-#_6044bd804c7c7082337f26c1b612a2e8p6@C2orf63
2.42e-50FFCP PHASE2:Hg19::chr5:144875561..144875565,+#_6044bd804c7c7082337f26c1b612a2e8p@chr5:144875561..144875565, +
2.42e-50FFCP PHASE2:Hg19::chr7:137564648..137564658,-#_6044bd804c7c7082337f26c1b612a2e8p32@CREB3L2
2.42e-50FFCP PHASE2:Hg19::chr15:39288691..39288698,+#_6044bd804c7c7082337f26c1b612a2e8p@chr15:39288691..39288698, +
2.42e-50FFCP PHASE2:Hg19::chr3:46477553..46477563,-#_6044bd804c7c7082337f26c1b612a2e8p@chr3:46477553..46477563, -
2.42e-50FFCP PHASE2:Hg19::chr2:55459485..55459491,-#_6044bd804c7c7082337f26c1b612a2e8p6@C2orf63
2.42e-50FFCP PHASE1:Hg19::chr15:39288691..39288698,+#_6044bd804c7c7082337f26c1b612a2e8p@chr15:39288691..39288698, +
2.42e-50FFCP PHASE2:Hg19::chr19:54024454..54024463,+#_6044bd804c7c7082337f26c1b612a2e8p31@ZNF331
2.42e-50FFCP PHASE1:Hg19::chr3:46477553..46477563,-#_6044bd804c7c7082337f26c1b612a2e8p@chr3:46477553..46477563, -
2.42e-50FFCP PHASE2:Hg19::chr21:17214724..17214740,+#_6044bd804c7c7082337f26c1b612a2e8p11@USP25
2.42e-50FFCP PHASE1:Hg19::chr5:144875561..144875565,+#_6044bd804c7c7082337f26c1b612a2e8p@chr5:144875561..144875565, +
2.42e-50FFCP PHASE1:Hg19::chr7:137564648..137564658,-#_6044bd804c7c7082337f26c1b612a2e8p32@CREB3L2
2.42e-50FFCP PHASE1:Hg19::chr19:54024454..54024463,+#_6044bd804c7c7082337f26c1b612a2e8p31@ZNF331
2.42e-50FFCP PHASE1:Hg19::chr21:17214724..17214740,+#_6044bd804c7c7082337f26c1b612a2e8p11@USP25
3.99e-50FFCP PHASE1:Hg19::chr15:39420650..39420666,+#_ec41b333af11603801817b8e25ed7c65p@chr15:39420650..39420666, +
3.99e-50FFCP PHASE1:Hg19::chr14:64804787..64804796,-#_ec41b333af11603801817b8e25ed7c65p10@ESR2
3.99e-50FFCP PHASE1:Hg19::chr12:5198350..5198359,+#_ec41b333af11603801817b8e25ed7c65p@chr12:5198350..5198359, +
3.99e-50FFCP PHASE1:Hg19::chr4:103969123..103969127,-#_ec41b333af11603801817b8e25ed7c65p@chr4:103969123..103969127, -
3.99e-50FFCP PHASE1:Hg19::chr11:829412..829430,+#_ec41b333af11603801817b8e25ed7c65p11@EFCAB4A
3.99e-50FFCP PHASE2:Hg19::chr12:5198350..5198359,+#_ec41b333af11603801817b8e25ed7c65p@chr12:5198350..5198359, +
3.99e-50FFCP PHASE2:Hg19::chr15:39420650..39420666,+#_ec41b333af11603801817b8e25ed7c65p@chr15:39420650..39420666, +
3.99e-50FFCP PHASE2:Hg19::chr14:64804787..64804796,-#_ec41b333af11603801817b8e25ed7c65p10@ESR2
3.99e-50FFCP PHASE2:Hg19::chr11:829412..829430,+#_ec41b333af11603801817b8e25ed7c65p11@EFCAB4A
3.99e-50FFCP PHASE2:Hg19::chr4:103969123..103969127,-#_ec41b333af11603801817b8e25ed7c65p@chr4:103969123..103969127, -
6.58e-50FFCP PHASE2:Hg19::chr17:58165788..58165794,-#_09c6e82b02836b46170104a7389e3c92p1@LOC645638
6.58e-50FFCP PHASE1:Hg19::chr7:92462738..92462749,-#_09c6e82b02836b46170104a7389e3c92p51@CDK6
6.58e-50FFCP PHASE2:Hg19::chr16:1203194..1203207,+#_09c6e82b02836b46170104a7389e3c92p3@CACNA1H
6.58e-50FFCP PHASE1:Hg19::chr14:50697797..50697820,-#_09c6e82b02836b46170104a7389e3c92p13@SOS2
6.58e-50FFCP PHASE2:Hg19::chr7:92462738..92462749,-#_09c6e82b02836b46170104a7389e3c92p51@CDK6
6.58e-50FFCP PHASE1:Hg19::chr17:58165788..58165794,-#_09c6e82b02836b46170104a7389e3c92p1@LOC645638
6.58e-50FFCP PHASE2:Hg19::chr14:50697797..50697820,-#_09c6e82b02836b46170104a7389e3c92p13@SOS2
6.58e-50FFCP PHASE1:Hg19::chr16:1203194..1203207,+#_09c6e82b02836b46170104a7389e3c92p3@CACNA1H
6.62e-41FFCP PHASE2:Hg19::chr3:194214959..194214968,-#_6eb9efe0356d54a51e504de9c22e4e78p@chr3:194214959..194214968, -
6.62e-41FFCP PHASE1:Hg19::chr3:194214959..194214968,-#_6eb9efe0356d54a51e504de9c22e4e78p@chr3:194214959..194214968, -
9.91e-41FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_254e2281d9fff376a63699eaa0aac5f5p@chr9:114135497..114135526, -
9.91e-41FFCP PHASE2:Hg19::chr11:77282391..77282402,+#_254e2281d9fff376a63699eaa0aac5f5p@chr11:77282391..77282402, +
9.91e-41FFCP PHASE1:Hg19::chr2:102604493..102604499,+#_254e2281d9fff376a63699eaa0aac5f5p@chr2:102604493..102604499, +
9.91e-41FFCP PHASE2:Hg19::chr11:94822746..94822757,+#_254e2281d9fff376a63699eaa0aac5f5p8@ENDOD1
9.91e-41FFCP PHASE2:Hg19::chr13:49549473..49549480,+#_254e2281d9fff376a63699eaa0aac5f5p@chr13:49549473..49549480, +
9.91e-41FFCP PHASE2:Hg19::chr15:34522001..34522013,+#_254e2281d9fff376a63699eaa0aac5f5p@chr15:34522001..34522013, +
9.91e-41FFCP PHASE1:Hg19::chr8:125193673..125193689,-#_254e2281d9fff376a63699eaa0aac5f5p@chr8:125193673..125193689, -
9.91e-41FFCP PHASE1:Hg19::chr3:49139102..49139119,-#_254e2281d9fff376a63699eaa0aac5f5p@chr3:49139102..49139119, -

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