FFCP PHASE1:Hg19::chr10:104533977..104533990,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:104533977..104533990,+
|short_description=p@chr10:104533977..104533990,+
|description=CAGE_peak_at_chr10:104533977..104533990,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:104533977..104533990,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr10:104533977..104533990,+ | |||
|id=chr10:104533977..104533990,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.45e-41!42;CL:0000860!2.65e-38!45;CL:0000766!4.54e-37!76;CL:0000738!1.60e-32!140;CL:0000557!2.68e-32!71;CL:0000839!2.02e-30!70;CL:0000037!2.93e-27!172;CL:0000566!2.93e-27!172;CL:0002194!5.87e-27!63;CL:0000576!5.87e-27!63;CL:0000040!5.87e-27!63;CL:0000559!5.87e-27!63;CL:0002009!6.48e-26!65;CL:0000988!4.12e-25!182;CL:0000763!5.64e-24!112;CL:0000049!5.64e-24!112;CL:0002031!1.18e-21!124;CL:0002087!2.61e-21!119;CL:0002393!2.41e-20!9;CL:0002397!2.41e-20!9;CL:0002032!3.45e-20!165;CL:0000837!3.45e-20!165;CL:0002320!7.01e-12!365;CL:0000134!1.18e-11!358;CL:0000767!7.43e-11!3;CL:0000219!1.50e-09!390;CL:0000623!2.43e-09!3;CL:0000825!2.43e-09!3;CL:0000048!3.67e-08!430;CL:0000723!7.07e-08!436;CL:0000034!1.64e-07!444;CL:0000094!8.57e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000767;2.56e-41;3!CL:0000097;2.02e-24;5!CL:0002393;1.79e-20;6!CL:0002397;1.79e-20;6!CL:0000226;1.77e-18;3!CL:0000842;1.77e-18;3!CL:0000094;6.02e-16;8!CL:0002032;1.72e-14;1!CL:0000557;1.72e-14;1!CL:0000163;7.19e-14;9!CL:0000081;9.19e-12;11!CL:0000766;5.02e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.57e-41,3;CL:0000097,1.20e-24,5;CL:0002028,1.20e-24,5;CL:0000766,8.14e-21,72;CL:0000226,1.14e-18,3;CL:0000842,1.14e-18,3;CL:0000763,3.41e-16,108;CL:0000049,3.41e-16,108;CL:0000094,6.02e-16,8;CL:0000738,5.69e-15,136;CL:0000557,9.03e-15,67;CL:0000163,5.40e-14,9;CL:0000037,6.61e-14,168;CL:0002393,8.39e-14,9;CL:0002397,8.39e-14,9;CL:0000988,4.00e-13,177;CL:0000839,7.00e-12,66;CL:0000081,9.19e-12,11;CL:0002032,1.96e-10,161;CL:0000837,1.96e-10,161;CL:0000860,8.37e-08,42;CL:0002057,8.37e-08,42;CL:0000473,8.13e-07,48;CL:0000234,8.13e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.60e-32!80;UBERON:0001474!4.43e-29!86;UBERON:0002390!1.04e-28!102;UBERON:0003061!1.04e-28!102;UBERON:0002193!2.64e-25!112;UBERON:0004765!4.33e-25!101;UBERON:0001434!4.33e-25!101;UBERON:0002405!4.72e-21!115;UBERON:0002204!9.18e-12!167;UBERON:0002384!3.21e-11!375;UBERON:0003081!5.09e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.97e-15,98;UBERON:0003061,6.97e-15,98;UBERON:0002193,2.11e-13,108;UBERON:0002371,6.18e-13,76;UBERON:0001474,6.24e-12,82;UBERON:0004765,8.49e-11,90;UBERON:0002405,2.02e-10,93;UBERON:0001434,1.25e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,4.22212337906934,8.05043841243595,0,0,0,0,0,0.293600439334847,1.10799081706375,0.401088894940283,1.30206522429511,0,0,0,0,0,0.485168122375632,0,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0,0.65156653411535,0,0,0,0.211255286311942,0.850417199860174,2.51590374610051,0.673971786878971,1.35159203557356,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0.267540828089713,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,2.30591925467138,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,4.22212337906934,8.05043841243595,0,0,0,0,0,0.293600439334847,1.10799081706375,0.401088894940283,1.30206522429511,0,0,0,0,0,0.485168122375632,0,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0,0.65156653411535,0,0,0,0.211255286311942,0.850417199860174,2.51590374610051,0.673971786878971,1.35159203557356,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0.267540828089713,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,2.30591925467138,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:104533977..104533990,+ | |||
}} | }} |
Latest revision as of 09:52, 23 July 2015
Short description: | p@chr10:104533977..104533990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104533977..104533990, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.57e-41 | 3 |
mast cell | 1.20e-24 | 5 |
basophil mast progenitor cell | 1.20e-24 | 5 |
myeloid leukocyte | 8.14e-21 | 72 |
single nucleate cell | 1.14e-18 | 3 |
mononuclear cell | 1.14e-18 | 3 |
myeloid cell | 3.41e-16 | 108 |
common myeloid progenitor | 3.41e-16 | 108 |
granulocyte | 6.02e-16 | 8 |
leukocyte | 5.69e-15 | 136 |
granulocyte monocyte progenitor cell | 9.03e-15 | 67 |
endocrine cell | 5.40e-14 | 9 |
hematopoietic stem cell | 6.61e-14 | 168 |
intermediate monocyte | 8.39e-14 | 9 |
CD14-positive, CD16-positive monocyte | 8.39e-14 | 9 |
hematopoietic cell | 4.00e-13 | 177 |
myeloid lineage restricted progenitor cell | 7.00e-12 | 66 |
blood cell | 9.19e-12 | 11 |
hematopoietic oligopotent progenitor cell | 1.96e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-10 | 161 |
classical monocyte | 8.37e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.37e-08 | 42 |
defensive cell | 8.13e-07 | 48 |
phagocyte | 8.13e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.97e-15 | 98 |
blood island | 6.97e-15 | 98 |
hemolymphoid system | 2.11e-13 | 108 |
bone marrow | 6.18e-13 | 76 |
bone element | 6.24e-12 | 82 |
skeletal element | 8.49e-11 | 90 |
immune system | 2.02e-10 | 93 |
skeletal system | 1.25e-09 | 100 |