FFCP PHASE1:Hg19::chr10:119001535..119001548,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-101bp_to_ENST00000425264_5end | |association_with_transcript=-101bp_to_ENST00000425264_5end | ||
|cluster_id=chr10:119001535..119001548,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_2_at_ENST00000425264_5end | |description=CAGE_peak_2_at_ENST00000425264_5end | ||
|id=chr10:119001535..119001548,- | |id=chr10:119001535..119001548,- | ||
|ontology_enrichment_celltype=CL:0002274!4.92e-25!5;CL:0000457!4.92e-25!5;CL:0002191!4.92e-25!5;CL:0000097!4.92e-25!5;CL:0000831!4.92e-25!5;CL:0002028!4.92e-25!5;CL:0000767!2.12e-14!3;CL:0000163!8.85e-14!9;CL:0000764!2.79e-10!2;CL:0000765!2.79e-10!2;CL:0000050!2.79e-10!2;CL:0000038!2.79e-10!2;CL:0000558!2.79e-10!2;CL:0000547!2.79e-10!2;CL:0000549!2.79e-10!2;CL:0000550!2.79e-10!2;CL:0000552!2.79e-10!2;CL:0001014!3.06e-10!2;CL:0001016!3.06e-10!2;CL:0000763!1.97e-09!112;CL:0000049!1.97e-09!112;CL:0000037!3.78e-08!172;CL:0000566!3.78e-08!172;CL:0000988!1.93e-07!182;CL:0002032!7.93e-07!165;CL:0000837!7.93e-07!165 | |ontology_enrichment_celltype=CL:0002274!4.92e-25!5;CL:0000457!4.92e-25!5;CL:0002191!4.92e-25!5;CL:0000097!4.92e-25!5;CL:0000831!4.92e-25!5;CL:0002028!4.92e-25!5;CL:0000767!2.12e-14!3;CL:0000163!8.85e-14!9;CL:0000764!2.79e-10!2;CL:0000765!2.79e-10!2;CL:0000050!2.79e-10!2;CL:0000038!2.79e-10!2;CL:0000558!2.79e-10!2;CL:0000547!2.79e-10!2;CL:0000549!2.79e-10!2;CL:0000550!2.79e-10!2;CL:0000552!2.79e-10!2;CL:0001014!3.06e-10!2;CL:0001016!3.06e-10!2;CL:0000763!1.97e-09!112;CL:0000049!1.97e-09!112;CL:0000037!3.78e-08!172;CL:0000566!3.78e-08!172;CL:0000988!1.93e-07!182;CL:0002032!7.93e-07!165;CL:0000837!7.93e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.30e-99;5!CL:0000163;1.97e-55;9!CL:0000037;6.98e-21;1!CL:0001024;6.98e-21;1!CL:0000151;6.01e-13;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.30e-99,5;CL:0002028,2.30e-99,5;CL:0000163,1.97e-55,9;CL:0001024,9.43e-21,1;CL:0000151,4.57e-14,36;CL:0000763,2.38e-11,108;CL:0000049,2.38e-11,108;CL:0000037,4.36e-09,168;CL:0000988,1.34e-08,177;CL:0000839,1.34e-07,66;CL:0002032,1.71e-07,161;CL:0000837,1.71e-07,161;CL:0000557,1.73e-07,67;CL:0000766,5.60e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;4.22e-21;1!DOID:1036;8.90e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,4.22e-21,1;DOID:1036,8.47e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-08!115;UBERON:0000178!1.07e-07!15;UBERON:0000179!1.07e-07!15;UBERON:0000463!1.07e-07!15;UBERON:0003978!7.14e-07!3;UBERON:0009751!7.14e-07!3;UBERON:0000946!7.14e-07!3;UBERON:0002523!7.14e-07!3;UBERON:0005983!7.14e-07!3;UBERON:0002165!7.14e-07!3;UBERON:0002062!7.14e-07!3;UBERON:0007280!7.14e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.42e-08!115;UBERON:0000178!1.07e-07!15;UBERON:0000179!1.07e-07!15;UBERON:0000463!1.07e-07!15;UBERON:0003978!7.14e-07!3;UBERON:0009751!7.14e-07!3;UBERON:0000946!7.14e-07!3;UBERON:0002523!7.14e-07!3;UBERON:0005983!7.14e-07!3;UBERON:0002165!7.14e-07!3;UBERON:0002062!7.14e-07!3;UBERON:0007280!7.14e-07!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.27e-09,98;UBERON:0003061,1.27e-09,98;UBERON:0002371,2.94e-09,76;UBERON:0002193,1.03e-08,108;UBERON:0001474,1.40e-08,82;UBERON:0004765,8.22e-08,90;UBERON:0002405,1.48e-07,93;UBERON:0001434,5.08e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,14.9682337822484,13.4763275101502,23.4915524069647,14.5178798440337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,2.82559859230266,0,0,0,0,1.58936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97022049798414,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,14.9682337822484,13.4763275101502,23.4915524069647,14.5178798440337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,2.82559859230266,0,0,0,0,1.58936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97022049798414,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000425264 | |short_description=p2@ENST00000425264 | ||
}} | }} |
Latest revision as of 10:50, 23 July 2015
Short description: | p2@ENST00000425264 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000425264_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -101bp_to_ENST00000425264_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.30e-99 | 5 |
basophil mast progenitor cell | 2.30e-99 | 5 |
endocrine cell | 1.97e-55 | 9 |
CD34-positive, CD38-negative hematopoietic stem cell | 9.43e-21 | 1 |
secretory cell | 4.57e-14 | 36 |
myeloid cell | 2.38e-11 | 108 |
common myeloid progenitor | 2.38e-11 | 108 |
hematopoietic stem cell | 4.36e-09 | 168 |
hematopoietic cell | 1.34e-08 | 177 |
myeloid lineage restricted progenitor cell | 1.34e-07 | 66 |
hematopoietic oligopotent progenitor cell | 1.71e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-07 | 161 |
granulocyte monocyte progenitor cell | 1.73e-07 | 67 |
myeloid leukocyte | 5.60e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.27e-09 | 98 |
blood island | 1.27e-09 | 98 |
bone marrow | 2.94e-09 | 76 |
hemolymphoid system | 1.03e-08 | 108 |
bone element | 1.40e-08 | 82 |
skeletal element | 8.22e-08 | 90 |
immune system | 1.48e-07 | 93 |
skeletal system | 5.08e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 4.22e-21 | 1 |
chronic leukemia | 8.47e-11 | 8 |