FFCP PHASE1:Hg19::chr10:11936692..11936705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000445498,uc001iky.1_5end | |association_with_transcript=0bp_to_ENST00000445498,uc001iky.1_5end | ||
|cluster_id=chr10:11936692..11936705,- | |||
|coexpression_cluster_id=C1299 | |||
|description=CAGE_peak_1_at_ENST00000445498_5end,CAGE_peak_1_at_uc001iky.1_5end | |description=CAGE_peak_1_at_ENST00000445498_5end,CAGE_peak_1_at_uc001iky.1_5end | ||
|id=chr10:11936692..11936705,- | |id=chr10:11936692..11936705,- | ||
|ontology_enrichment_celltype=CL:0002541!6.42e-11!3;CL:0000039!1.74e-07!7;CL:0000586!1.74e-07!7 | |ontology_enrichment_celltype=CL:0002541!6.42e-11!3;CL:0000039!1.74e-07!7;CL:0000586!1.74e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;9.17e-18;3!CL:0000039;8.90e-08;7!CL:0000586;8.90e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.17e-18,3;CL:0000039,8.90e-08,7;CL:0000586,8.90e-08,7;CL:0000763,4.01e-07,108;CL:0000049,4.01e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.39e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!2.24e-20!31;DOID:1036!2.68e-20!8;DOID:1240!8.70e-20!39;DOID:2531!4.38e-14!51;DOID:0060083!4.38e-14!51;DOID:0050686!4.57e-07!137;DOID:162!9.49e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.21e-34;8!DOID:8692;1.27e-32;31!DOID:1240;4.93e-20;39!DOID:2531;1.41e-12;51!DOID:0060083;1.41e-12;51!DOID:8552;5.57e-07;1!DOID:1799;6.24e-07;1!DOID:10165;6.24e-07;1!DOID:1798;6.24e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.21e-34,8;DOID:8692,2.14e-32,31;DOID:1240,3.91e-25,39;DOID:2531,1.63e-18,51;DOID:0060083,1.63e-18,51;DOID:0050686,4.62e-09,137;DOID:162,2.12e-07,235;DOID:14566,3.79e-07,239;DOID:8552,5.57e-07,1;DOID:1799,6.24e-07,1;DOID:10165,6.24e-07,1;DOID:1798,6.24e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.96e-11!15;UBERON:0000179!1.96e-11!15;UBERON:0000463!1.96e-11!15;UBERON:0000476!6.42e-11!3;UBERON:0000920!6.42e-11!3;UBERON:0005631!2.33e-10!14;UBERON:0000158!2.33e-10!14;UBERON:0003124!6.61e-08!7 | |ontology_enrichment_uberon=UBERON:0000178!1.96e-11!15;UBERON:0000179!1.96e-11!15;UBERON:0000463!1.96e-11!15;UBERON:0000476!6.42e-11!3;UBERON:0000920!6.42e-11!3;UBERON:0005631!2.33e-10!14;UBERON:0000158!2.33e-10!14;UBERON:0003124!6.61e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.17e-18;3!UBERON:0000920;9.17e-18;3!UBERON:0005631;3.35e-09;10!UBERON:0000158;3.35e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.17e-18,3;UBERON:0003124,3.73e-13,7;UBERON:0005631,7.58e-10,14;UBERON:0000158,7.58e-10,14 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58281408323817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.41438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.238231775457789,0.411362273086194,0,2.16012574895246,2.37937552888281,0,0,0,0,0,0,0.159426272728822,4.39074617152197,0.191505370132367,0,166.855677301122,6.73913227472301,0,0,0,24.3780160034309,0,0,0,0,0,0,0,0,192.935478509403,0,0,7.66065526394986,0,0,0,0,0,0,24.8294264127198,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0148728691811,91.0727422332837,125.481186884861,65.7316600128149,133.02348360821,34.3490975256984,234.535301448199,0,50.0767017900129,94.4082353192888,179.348550190659,208.414473979757,277.576904858044,180.4557998207,130.645867921871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,105.078426559154,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,27.4680168338143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.743614585554013,11.1728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03973099535304,0,0,0,0,0,0,71.7624342879097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.1495064127832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,16.1530242616341,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,7.04741893429626,10.1826369459348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000445498,p1@uc001iky.1 | |short_description=p1@ENST00000445498,p1@uc001iky.1 | ||
}} | }} |
Latest revision as of 10:53, 23 July 2015
Short description: | p1@ENST00000445498, p1@uc001iky.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000445498_5end, CAGE_peak_1_at_uc001iky.1_5end |
Coexpression cluster: | C1299_chronic_acute_chorionic_leukemia_choriocarcinoma_pancreatic_placenta |
Association with transcript: | 0bp_to_ENST00000445498, uc001iky.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.17e-18 | 3 |
germ line cell | 8.90e-08 | 7 |
germ cell | 8.90e-08 | 7 |
myeloid cell | 4.01e-07 | 108 |
common myeloid progenitor | 4.01e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.17e-18 | 3 |
chorion | 3.73e-13 | 7 |
extraembryonic membrane | 7.58e-10 | 14 |
membranous layer | 7.58e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.21e-34 | 8 |
myeloid leukemia | 2.14e-32 | 31 |
leukemia | 3.91e-25 | 39 |
hematologic cancer | 1.63e-18 | 51 |
immune system cancer | 1.63e-18 | 51 |
organ system cancer | 4.62e-09 | 137 |
cancer | 2.12e-07 | 235 |
disease of cellular proliferation | 3.79e-07 | 239 |
chronic myeloid leukemia | 5.57e-07 | 1 |
islet cell tumor | 6.24e-07 | 1 |
endocrine pancreas cancer | 6.24e-07 | 1 |
pancreatic endocrine carcinoma | 6.24e-07 | 1 |