FFCP PHASE1:Hg19::chr10:122045483..122045485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:122045483..122045485,+ | |||
|description=CAGE_peak_at_chr10:122045483..122045485,+ | |description=CAGE_peak_at_chr10:122045483..122045485,+ | ||
|id=chr10:122045483..122045485,+ | |id=chr10:122045483..122045485,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.26e-17!24;CL:0000826!3.26e-17!24;CL:0000838!1.93e-10!52;CL:0000542!3.12e-10!53;CL:0000051!3.12e-10!53 | |ontology_enrichment_celltype=CL:0000945!3.26e-17!24;CL:0000826!3.26e-17!24;CL:0000838!1.93e-10!52;CL:0000542!3.12e-10!53;CL:0000051!3.12e-10!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3!UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease=DOID:2355!5.38e-13!1;DOID:0060058!2.38e-11!10;DOID:74!3.93e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.22e-27;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.38e-27,10 | |||
|ontology_enrichment_uberon=UBERON:0003978!8.55e-17!3;UBERON:0009751!8.55e-17!3;UBERON:0000946!8.55e-17!3;UBERON:0002523!8.55e-17!3;UBERON:0005983!8.55e-17!3;UBERON:0002165!8.55e-17!3;UBERON:0002062!8.55e-17!3;UBERON:0007280!8.55e-17!3;UBERON:0000941!1.82e-13!1;UBERON:0004904!1.82e-13!1;UBERON:0002464!1.82e-13!1;UBERON:0001021!1.82e-13!1;UBERON:0001785!1.82e-13!1;UBERON:0002134!2.32e-13!1;UBERON:0005208!2.32e-13!1;UBERON:0005946!2.32e-13!1;UBERON:0005965!2.32e-13!1;UBERON:0002078!2.32e-13!1;UBERON:0002146!4.23e-13!1;UBERON:0005623!4.23e-13!1;UBERON:0003714!2.28e-07!2;UBERON:0005162!2.28e-07!2;UBERON:0000122!2.28e-07!2;UBERON:0002081!2.58e-07!2;UBERON:0002133!2.58e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.34e-66;1!UBERON:0001785;3.34e-66;1!UBERON:0002464;3.34e-66;1!UBERON:0004904;3.34e-66;1!UBERON:0001021;3.34e-66;1!UBERON:0003714;5.96e-34;2!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0001781,8.69e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0000010,1.12e-08,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p@chr10:122045483..122045485,+ | |short_description=p@chr10:122045483..122045485,+ | ||
}} | }} |
Latest revision as of 11:04, 23 July 2015
Short description: | p@chr10:122045483..122045485, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:122045483..122045485, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
neural tissue | 5.04e-34 | 2 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
layer of retina | 8.69e-18 | 4 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
peripheral nervous system | 1.12e-08 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.38e-27 | 10 |