FFCP PHASE1:Hg19::chr10:124254447..124254458,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:124254447..124254458,- | |||
|description=CAGE_peak_at_chr10:124254447..124254458,- | |description=CAGE_peak_at_chr10:124254447..124254458,- | ||
|id=chr10:124254447..124254458,- | |id=chr10:124254447..124254458,- | ||
|ontology_enrichment_celltype=CL:0000055!1.24e-20!180;CL:0000057!1.53e-18!75;CL:0002620!8.18e-16!23;CL:0002371!1.32e-11!591;CL:0000548!5.49e-11!679;CL:0000004!5.49e-11!679;CL:0000255!5.49e-11!679;CL:0000012!8.69e-11!682;CL:0002551!9.00e-11!6;CL:0000144!2.63e-10!625;CL:0000003!8.09e-09!722;CL:0000220!2.25e-08!246;CL:0002321!3.47e-08!248;CL:0002543!3.16e-07!6;CL:0002556!5.43e-07!6;CL:0000188!5.87e-07!9 | |ontology_enrichment_celltype=CL:0000055!1.24e-20!180;CL:0000057!1.53e-18!75;CL:0002620!8.18e-16!23;CL:0002371!1.32e-11!591;CL:0000548!5.49e-11!679;CL:0000004!5.49e-11!679;CL:0000255!5.49e-11!679;CL:0000012!8.69e-11!682;CL:0002551!9.00e-11!6;CL:0000144!2.63e-10!625;CL:0000003!8.09e-09!722;CL:0000220!2.25e-08!246;CL:0002321!3.47e-08!248;CL:0002543!3.16e-07!6;CL:0002556!5.43e-07!6;CL:0000188!5.87e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002551;8.95e-31;6!CL:0002620;4.08e-15;23!CL:0002556;5.06e-12;6!CL:0000346;6.28e-11;3!CL:1000428;6.28e-11;3!CL:0000057;8.82e-11;73!CL:0002504;1.08e-10;3!CL:1000279;1.08e-10;3!CL:1000280;1.08e-10;3!CL:0002552;4.31e-07;5!CL:0002559;6.84e-07;5!CL:0002188;9.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,8.45e-31,6;CL:0000057,1.05e-16,76;CL:0002620,4.47e-15,23;CL:0002556,5.67e-12,6;CL:0000346,4.90e-11,3;CL:1000428,4.90e-11,3;CL:0002504,1.08e-10,3;CL:1000279,1.08e-10,3;CL:1000280,1.08e-10,3;CL:0002552,3.89e-07,5;CL:0002559,5.91e-07,5;CL:0002188,9.18e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.76e-14!83;UBERON:0002329!1.76e-14!83;UBERON:0003077!1.76e-14!83;UBERON:0003059!1.76e-14!83;UBERON:0007282!1.76e-14!83;UBERON:0009618!1.76e-14!83;UBERON:0007285!1.76e-14!83;UBERON:0003102!1.44e-12!95;UBERON:0002199!2.07e-12!45;UBERON:0002416!2.07e-12!45;UBERON:0002067!3.48e-12!9;UBERON:0004016!3.48e-12!9;UBERON:0010083!3.48e-12!9;UBERON:0002097!5.94e-12!40;UBERON:0004290!6.18e-10!70;UBERON:0000486!1.13e-09!82;UBERON:0005284!1.65e-08!5;UBERON:0005256!4.19e-08!143;UBERON:0001758!5.43e-07!6;UBERON:0003672!5.43e-07!6;UBERON:0000475!7.18e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.39e-39;9!UBERON:0001758;5.06e-12;6!UBERON:0003672;5.06e-12;6!UBERON:0000412;6.28e-11;3!UBERON:0001992;6.28e-11;3!UBERON:0003129;2.24e-10;7!UBERON:0003102;5.02e-10;50!UBERON:0002097;5.90e-10;41!UBERON:0004923;1.06e-08;55!UBERON:0002199;1.44e-07;46!UBERON:0002416;1.44e-07;46!UBERON:0002073;6.84e-07;5!UBERON:0005284;6.84e-07;5!UBERON:0011137;9.14e-07;11!UBERON:0010323;9.14e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,9.89e-40,9;UBERON:0004016,9.89e-40,9;UBERON:0010083,9.89e-40,9;UBERON:0003102,2.85e-14,99;UBERON:0002097,2.34e-13,41;UBERON:0001758,5.67e-12,6;UBERON:0003672,5.67e-12,6;UBERON:0002199,9.32e-12,46;UBERON:0002416,9.32e-12,46;UBERON:0007503,1.65e-11,78;UBERON:0000412,4.90e-11,3;UBERON:0001992,4.90e-11,3;UBERON:0003129,2.47e-10,7;UBERON:0002329,8.10e-09,71;UBERON:0003059,8.10e-09,71;UBERON:0007282,8.10e-09,71;UBERON:0004290,8.10e-09,71;UBERON:0009618,8.10e-09,71;UBERON:0003077,1.13e-08,72;UBERON:0007285,1.13e-08,72;UBERON:0007524,1.56e-08,73;UBERON:0004923,7.57e-08,66;UBERON:0000486,2.61e-07,83;UBERON:0002073,5.91e-07,5;UBERON:0005086,5.91e-07,5;UBERON:0001444,8.37e-07,49;UBERON:0005284,8.66e-07,5;UBERON:0010323,9.70e-07,11 | |||
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| ||
|short_description=p@chr10:124254447..124254458,- | |short_description=p@chr10:124254447..124254458,- | ||
}} | }} |
Latest revision as of 11:13, 23 July 2015
Short description: | p@chr10:124254447..124254458, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:124254447..124254458, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 8.45e-31 | 6 |
fibroblast | 1.05e-16 | 76 |
skin fibroblast | 4.47e-15 | 23 |
fibroblast of periodontium | 5.67e-12 | 6 |
hair follicle dermal papilla cell | 4.90e-11 | 3 |
stem cell of epidermis | 4.90e-11 | 3 |
enteric smooth muscle cell | 1.08e-10 | 3 |
smooth muscle cell of large intestine | 1.08e-10 | 3 |
smooth muscle cell of colon | 1.08e-10 | 3 |
fibroblast of gingiva | 3.89e-07 | 5 |
hair follicle cell | 5.91e-07 | 5 |
glomerular endothelial cell | 9.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermis | 9.89e-40 | 9 |
dermatome | 9.89e-40 | 9 |
future dermis | 9.89e-40 | 9 |
surface structure | 2.85e-14 | 99 |
skin of body | 2.34e-13 | 41 |
periodontium | 5.67e-12 | 6 |
dentition | 5.67e-12 | 6 |
integument | 9.32e-12 | 46 |
integumental system | 9.32e-12 | 46 |
epithelial vesicle | 1.65e-11 | 78 |
dermal papilla | 4.90e-11 | 3 |
papillary layer of dermis | 4.90e-11 | 3 |
skull | 2.47e-10 | 7 |
somite | 8.10e-09 | 71 |
presomitic mesoderm | 8.10e-09 | 71 |
presumptive segmental plate | 8.10e-09 | 71 |
dermomyotome | 8.10e-09 | 71 |
trunk paraxial mesoderm | 8.10e-09 | 71 |
paraxial mesoderm | 1.13e-08 | 72 |
presumptive paraxial mesoderm | 1.13e-08 | 72 |
dense mesenchyme tissue | 1.56e-08 | 73 |
organ component layer | 7.57e-08 | 66 |
multilaminar epithelium | 2.61e-07 | 83 |
hair follicle | 5.91e-07 | 5 |
hair follicle placode | 5.91e-07 | 5 |
subdivision of head | 8.37e-07 | 49 |
brain vasculature | 8.66e-07 | 5 |
cranial skeletal system | 9.70e-07 | 11 |