FFCP PHASE1:Hg19::chr10:126366754..126366768,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126366754..126366768,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr10:126366754..126366768,- | |description=CAGE_peak_at_chr10:126366754..126366768,- | ||
|id=chr10:126366754..126366768,- | |id=chr10:126366754..126366768,- | ||
|ontology_enrichment_celltype=CL:0002274!4.29e-12!5;CL:0000457!4.29e-12!5;CL:0002191!4.29e-12!5;CL:0000097!4.29e-12!5;CL:0000831!4.29e-12!5;CL:0002028!4.29e-12!5;CL:0000764!1.15e-08!2;CL:0000765!1.15e-08!2;CL:0000050!1.15e-08!2;CL:0000038!1.15e-08!2;CL:0000558!1.15e-08!2;CL:0000547!1.15e-08!2;CL:0000549!1.15e-08!2;CL:0000550!1.15e-08!2;CL:0000552!1.15e-08!2 | |ontology_enrichment_celltype=CL:0002274!4.29e-12!5;CL:0000457!4.29e-12!5;CL:0002191!4.29e-12!5;CL:0000097!4.29e-12!5;CL:0000831!4.29e-12!5;CL:0002028!4.29e-12!5;CL:0000764!1.15e-08!2;CL:0000765!1.15e-08!2;CL:0000050!1.15e-08!2;CL:0000038!1.15e-08!2;CL:0000558!1.15e-08!2;CL:0000547!1.15e-08!2;CL:0000549!1.15e-08!2;CL:0000550!1.15e-08!2;CL:0000552!1.15e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.40e-49;2!CL:0000558;1.40e-49;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.80e-49,2;CL:0000765,1.80e-49,2;CL:0000050,1.80e-49,2;CL:0000038,1.80e-49,2;CL:0000558,1.80e-49,2;CL:0000547,1.80e-49,2;CL:0000549,1.80e-49,2;CL:0000550,1.80e-49,2;CL:0000552,1.80e-49,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.78e-26;1!UBERON:0010226;3.58e-26;1!UBERON:0010227;4.61e-26;1!UBERON:0005062;1.80e-07;4!UBERON:0007284;1.80e-07;4 | |||
|ontology_enrichment_disease=DOID:114!8.57e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.42e-50;2!DOID:178;7.62e-26;1!DOID:326;7.62e-26;1!DOID:3978;7.62e-26;1!DOID:3394;7.62e-26;1!DOID:5844;7.62e-26;1!DOID:1287;8.66e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.42e-50,2;DOID:178,7.62e-26,1;DOID:326,7.62e-26,1;DOID:3978,7.62e-26,1;DOID:3394,7.62e-26,1;DOID:5844,7.62e-26,1;DOID:1287,8.66e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.75e-18!115;UBERON:0000200!2.96e-13!6;UBERON:0004151!3.17e-12!3;UBERON:0003978!4.91e-12!3;UBERON:0009751!4.91e-12!3;UBERON:0000946!4.91e-12!3;UBERON:0002523!4.91e-12!3;UBERON:0005983!4.91e-12!3;UBERON:0002165!4.91e-12!3;UBERON:0002062!4.91e-12!3;UBERON:0007280!4.91e-12!3;UBERON:0001950!4.80e-11!20;UBERON:0002771!2.76e-10!3;UBERON:0002619!6.01e-10!22;UBERON:0007100!8.46e-10!27;UBERON:0001049!1.72e-09!57;UBERON:0005068!1.72e-09!57;UBERON:0006241!1.72e-09!57;UBERON:0007135!1.72e-09!57;UBERON:0001893!3.43e-09!34;UBERON:0002780!7.92e-09!41;UBERON:0001890!7.92e-09!41;UBERON:0006240!7.92e-09!41;UBERON:0002081!1.15e-08!2;UBERON:0000956!1.28e-08!25;UBERON:0000203!1.28e-08!25;UBERON:0003080!1.45e-08!42;UBERON:0002133!1.66e-08!2;UBERON:0003075!2.38e-08!86;UBERON:0007284!2.38e-08!86;UBERON:0001869!5.17e-08!32;UBERON:0002791!7.85e-08!33;UBERON:0002346!8.30e-08!90;UBERON:0002616!1.03e-07!59;UBERON:0002020!1.58e-07!34;UBERON:0003528!1.58e-07!34;UBERON:0000955!4.44e-07!69;UBERON:0006238!4.44e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.00e-35;25!UBERON:0004151;5.51e-34;3!UBERON:0002084;3.58e-26;1!UBERON:0002082;3.58e-26;1!UBERON:0002079;4.61e-26;1!UBERON:0002146;7.62e-26;1!UBERON:0005623;7.62e-26;1!UBERON:0000948;1.66e-18;22!UBERON:0002081;9.40e-14;2!UBERON:0003978;1.54e-09;3!UBERON:0000946;1.54e-09;3!UBERON:0003103;3.04e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.51e-34,3;UBERON:0007100,3.96e-33,27;UBERON:0002084,3.58e-26,1;UBERON:0002082,3.58e-26,1;UBERON:0010226,3.58e-26,1;UBERON:0002079,4.61e-26,1;UBERON:0002146,5.93e-26,1;UBERON:0005623,5.93e-26,1;UBERON:0000948,5.01e-17,24;UBERON:0005498,5.01e-17,24;UBERON:0004140,5.01e-17,24;UBERON:0009881,5.01e-17,24;UBERON:0004141,5.01e-17,24;UBERON:0003084,5.01e-17,24;UBERON:0007005,5.01e-17,24;UBERON:0004139,5.01e-17,24;UBERON:0004291,5.01e-17,24;UBERON:0002081,9.40e-14,2;UBERON:0010227,9.40e-14,2;UBERON:0003103,2.75e-13,68;UBERON:0007023,1.19e-10,114;UBERON:0003978,1.41e-09,3;UBERON:0009751,1.41e-09,3;UBERON:0000946,1.41e-09,3;UBERON:0002523,1.41e-09,3;UBERON:0005983,1.41e-09,3;UBERON:0002165,1.41e-09,3;UBERON:0002062,1.41e-09,3;UBERON:0007280,1.41e-09,3;UBERON:0001009,4.32e-08,112 | |||
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| ||
|short_description=p@chr10:126366754..126366768,- | |short_description=p@chr10:126366754..126366768,- | ||
}} | }} |
Latest revision as of 11:23, 23 July 2015
Short description: | p@chr10:126366754..126366768, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126366754..126366768, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.80e-49 | 2 |
erythroblast | 1.80e-49 | 2 |
megakaryocyte-erythroid progenitor cell | 1.80e-49 | 2 |
erythroid progenitor cell | 1.80e-49 | 2 |
reticulocyte | 1.80e-49 | 2 |
proerythroblast | 1.80e-49 | 2 |
basophilic erythroblast | 1.80e-49 | 2 |
polychromatophilic erythroblast | 1.80e-49 | 2 |
orthochromatic erythroblast | 1.80e-49 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 5.51e-34 | 3 |
primary circulatory organ | 3.96e-33 | 27 |
heart left ventricle | 3.58e-26 | 1 |
cardiac ventricle | 3.58e-26 | 1 |
future cardiac ventricle | 3.58e-26 | 1 |
left cardiac atrium | 4.61e-26 | 1 |
pulmonary valve | 5.93e-26 | 1 |
semi-lunar valve | 5.93e-26 | 1 |
heart | 5.01e-17 | 24 |
primitive heart tube | 5.01e-17 | 24 |
primary heart field | 5.01e-17 | 24 |
anterior lateral plate mesoderm | 5.01e-17 | 24 |
heart tube | 5.01e-17 | 24 |
heart primordium | 5.01e-17 | 24 |
cardiac mesoderm | 5.01e-17 | 24 |
cardiogenic plate | 5.01e-17 | 24 |
heart rudiment | 5.01e-17 | 24 |
cardiac atrium | 9.40e-14 | 2 |
future cardiac atrium | 9.40e-14 | 2 |
compound organ | 2.75e-13 | 68 |
adult organism | 1.19e-10 | 114 |
valve | 1.41e-09 | 3 |
cardiac mesenchyme | 1.41e-09 | 3 |
cardial valve | 1.41e-09 | 3 |
tunica intima | 1.41e-09 | 3 |
heart layer | 1.41e-09 | 3 |
endocardium | 1.41e-09 | 3 |
endocardial cushion | 1.41e-09 | 3 |
presumptive endocardium | 1.41e-09 | 3 |
circulatory system | 4.32e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.42e-50 | 2 |
vascular disease | 7.62e-26 | 1 |
ischemia | 7.62e-26 | 1 |
extrinsic cardiomyopathy | 7.62e-26 | 1 |
myocardial ischemia | 7.62e-26 | 1 |
myocardial infarction | 7.62e-26 | 1 |
cardiovascular system disease | 8.66e-26 | 4 |