FFCP PHASE1:Hg19::chr10:129704613..129704655,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129704613..129704655,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr10:129704613..129704655,+ | |description=CAGE_peak_at_chr10:129704613..129704655,+ | ||
|id=chr10:129704613..129704655,+ | |id=chr10:129704613..129704655,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;5.96e-34;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.96e-34,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!7.46e-16!1;DOID:1357!7.46e-16!1;DOID:3493!1.29e-08!2 | |ontology_enrichment_disease=DOID:0050619!7.46e-16!1;DOID:1357!7.46e-16!1;DOID:3493!1.29e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;4.52e-50;2!DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:3119;2.00e-08;14!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.52e-50,2;DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:3119,2.00e-08,14;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001764!7.46e-16!1;UBERON:0001825!7.46e-16!1;UBERON:0001282!1.78e-15!1;UBERON:0009842!1.78e-15!1;UBERON:0003704!1.78e-15!1;UBERON:0001171!1.78e-15!1;UBERON:0001172!1.78e-15!1;UBERON:0002336!3.66e-15!1;UBERON:0001018!3.66e-15!1;UBERON:0002473!3.66e-15!1;UBERON:0005340!3.66e-15!1;UBERON:0002316!3.66e-15!1;UBERON:0003544!3.66e-15!1;UBERON:0001020!3.66e-15!1;UBERON:0005970!3.66e-15!1;UBERON:0002437!3.66e-15!1;UBERON:0005162!3.08e-08!2;UBERON:0000122!3.08e-08!2 | |ontology_enrichment_uberon=UBERON:0001764!7.46e-16!1;UBERON:0001825!7.46e-16!1;UBERON:0001282!1.78e-15!1;UBERON:0009842!1.78e-15!1;UBERON:0003704!1.78e-15!1;UBERON:0001171!1.78e-15!1;UBERON:0001172!1.78e-15!1;UBERON:0002336!3.66e-15!1;UBERON:0001018!3.66e-15!1;UBERON:0002473!3.66e-15!1;UBERON:0005340!3.66e-15!1;UBERON:0002316!3.66e-15!1;UBERON:0003544!3.66e-15!1;UBERON:0001020!3.66e-15!1;UBERON:0005970!3.66e-15!1;UBERON:0002437!3.66e-15!1;UBERON:0005162!3.08e-08!2;UBERON:0000122!3.08e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.15e-21;5!UBERON:0010039;5.15e-21;5!UBERON:0001041;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8 | |||
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|short_description=p@chr10:129704613..129704655,+ | |short_description=p@chr10:129704613..129704655,+ | ||
}} | }} |
Latest revision as of 11:35, 23 July 2015
Short description: | p@chr10:129704613..129704655, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129704613..129704655, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.96e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.52e-50 | 2 |
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
gastrointestinal system cancer | 2.00e-08 | 14 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |