FFCP PHASE1:Hg19::chr10:13829239..13829250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:13829239..13829250,+ | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_at_chr10:13829239..13829250,+ | |||
|id=chr10:13829239..13829250,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.36e-26!52;CL:0000542!5.59e-26!53;CL:0000051!5.59e-26!53;CL:0000791!2.96e-21!18;CL:0000789!2.96e-21!18;CL:0002420!2.96e-21!18;CL:0002419!2.96e-21!18;CL:0000790!2.96e-21!18;CL:0000738!1.28e-16!140;CL:0000624!1.08e-14!6;CL:0000084!1.31e-14!25;CL:0000827!1.31e-14!25;CL:0000037!4.38e-13!172;CL:0000566!4.38e-13!172;CL:0002087!1.33e-12!119;CL:0000988!6.23e-12!182;CL:0002032!6.74e-12!165;CL:0000837!6.74e-12!165;CL:0002031!6.79e-12!124;CL:0000623!7.63e-12!3;CL:0000825!7.63e-12!3;CL:0000625!8.45e-11!11;CL:0000236!2.49e-08!14;CL:0000945!1.13e-07!24;CL:0000826!1.13e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.89e-23;3!CL:0000791;5.90e-15;18!CL:0000789;5.90e-15;18!CL:0002419;5.90e-15;18!CL:0000624;6.00e-12;6!CL:0000084;7.30e-11;25!CL:0000542;2.27e-07;53!CL:0000625;6.35e-07;11!CL:0000346;8.62e-07;3!CL:1000428;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.63e-23,3;CL:0000825,2.63e-23,3;CL:0000838,3.58e-15,52;CL:0000542,7.02e-15,53;CL:0000051,7.02e-15,53;CL:0000791,7.08e-15,18;CL:0000789,7.08e-15,18;CL:0002420,7.08e-15,18;CL:0002419,7.08e-15,18;CL:0000790,7.08e-15,18;CL:0000624,7.48e-12,6;CL:0000084,8.31e-11,25;CL:0000827,8.31e-11,25;CL:0000625,6.54e-07,11;CL:0000346,8.62e-07,3;CL:1000428,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.90e-15;18!CL:0000051;2.27e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.56e-08!4;UBERON:0005058!8.56e-08!4;UBERON:0009113!8.56e-08!4;UBERON:0003295!8.56e-08!4;UBERON:0005562!8.56e-08!4;UBERON:0004177!2.04e-07!7;UBERON:0009722!5.72e-07!11;UBERON:0007690!5.72e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;8.62e-07;3!UBERON:0001992;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,8.62e-07,3;UBERON:0001992,8.62e-07,3 | |||
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| ||
|short_description=p@chr10:13829239..13829250,+ | |||
}} | }} |
Latest revision as of 11:57, 23 July 2015
Short description: | p@chr10:13829239..13829250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:13829239..13829250, + |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.63e-23 | 3 |
pro-NK cell | 2.63e-23 | 3 |
lymphoid lineage restricted progenitor cell | 3.58e-15 | 52 |
lymphocyte | 7.02e-15 | 53 |
common lymphoid progenitor | 7.02e-15 | 53 |
mature alpha-beta T cell | 7.08e-15 | 18 |
alpha-beta T cell | 7.08e-15 | 18 |
immature T cell | 7.08e-15 | 18 |
mature T cell | 7.08e-15 | 18 |
immature alpha-beta T cell | 7.08e-15 | 18 |
CD4-positive, alpha-beta T cell | 7.48e-12 | 6 |
T cell | 8.31e-11 | 25 |
pro-T cell | 8.31e-11 | 25 |
CD8-positive, alpha-beta T cell | 6.54e-07 | 11 |
hair follicle dermal papilla cell | 8.62e-07 | 3 |
stem cell of epidermis | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 8.62e-07 | 3 |
papillary layer of dermis | 8.62e-07 | 3 |