FFCP PHASE1:Hg19::chr10:17568266..17568280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:17568266..17568280,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:17568266..17568280,+ | |||
|id=chr10:17568266..17568280,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.81e-98!42;CL:0000860!8.73e-91!45;CL:0000766!6.25e-79!76;CL:0000839!1.57e-76!70;CL:0000557!2.28e-75!71;CL:0002194!7.11e-71!63;CL:0000576!7.11e-71!63;CL:0000040!7.11e-71!63;CL:0000559!7.11e-71!63;CL:0002009!1.61e-68!65;CL:0002031!1.65e-51!124;CL:0000763!1.84e-51!112;CL:0000049!1.84e-51!112;CL:0000738!2.87e-50!140;CL:0002087!4.07e-45!119;CL:0002032!1.45e-41!165;CL:0000837!1.45e-41!165;CL:0000037!1.41e-39!172;CL:0000566!1.41e-39!172;CL:0000988!5.33e-37!182;CL:0002393!2.88e-18!9;CL:0002397!2.88e-18!9;CL:0000134!3.84e-16!358;CL:0002320!1.11e-15!365;CL:0000219!4.61e-14!390;CL:0000048!4.03e-12!430;CL:0000723!7.62e-12!436;CL:0000034!1.73e-11!444;CL:0002274!3.54e-09!5;CL:0000457!3.54e-09!5;CL:0002191!3.54e-09!5;CL:0000097!3.54e-09!5;CL:0000831!3.54e-09!5;CL:0002028!3.54e-09!5;CL:0000767!2.06e-07!3;CL:0000875!3.88e-07!3;CL:0002396!3.88e-07!3;CL:0000063!6.07e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.16e-46;33!CL:0002057;4.16e-46;33!CL:0000473;2.10e-34;39!CL:0000234;2.10e-34;39!CL:0000576;7.85e-18;48!CL:0000766;1.14e-14;69!CL:0002087;7.30e-10;104!CL:0000763;1.64e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-37,42;CL:0002057,1.23e-37,42;CL:0000473,6.57e-33,48;CL:0000234,6.57e-33,48;CL:0002194,2.78e-26,59;CL:0000576,2.78e-26,59;CL:0000040,2.78e-26,59;CL:0000559,2.78e-26,59;CL:0002009,1.99e-25,61;CL:0000839,1.65e-23,66;CL:0000557,3.69e-23,67;CL:0000766,1.49e-21,72;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000763,2.56e-14,108;CL:0000049,2.56e-14,108;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.34e-66!80;UBERON:0001474!3.81e-61!86;UBERON:0004765!4.22e-51!101;UBERON:0001434!4.22e-51!101;UBERON:0002390!1.55e-50!102;UBERON:0003061!1.55e-50!102;UBERON:0002193!1.99e-45!112;UBERON:0002405!4.58e-44!115;UBERON:0002204!3.48e-28!167;UBERON:0003081!3.60e-20!216;UBERON:0002384!4.68e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.03e-20,76;UBERON:0001474,6.42e-19,82;UBERON:0004765,3.17e-17,90;UBERON:0002405,1.15e-16,93;UBERON:0002390,8.36e-16,98;UBERON:0003061,8.36e-16,98;UBERON:0001434,1.75e-15,100;UBERON:0002193,2.56e-14,108;UBERON:0002204,3.99e-09,167;UBERON:0003081,2.04e-07,203 | |||
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|short_description=p@chr10:17568266..17568280,+ | |||
}} | }} |
Latest revision as of 12:20, 23 July 2015
Short description: | p@chr10:17568266..17568280, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17568266..17568280, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-37 | 42 |
defensive cell | 6.57e-33 | 48 |
phagocyte | 6.57e-33 | 48 |
monopoietic cell | 2.78e-26 | 59 |
monocyte | 2.78e-26 | 59 |
monoblast | 2.78e-26 | 59 |
promonocyte | 2.78e-26 | 59 |
macrophage dendritic cell progenitor | 1.99e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.65e-23 | 66 |
granulocyte monocyte progenitor cell | 3.69e-23 | 67 |
myeloid leukocyte | 1.49e-21 | 72 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
myeloid cell | 2.56e-14 | 108 |
common myeloid progenitor | 2.56e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.03e-20 | 76 |
bone element | 6.42e-19 | 82 |
skeletal element | 3.17e-17 | 90 |
immune system | 1.15e-16 | 93 |
hematopoietic system | 8.36e-16 | 98 |
blood island | 8.36e-16 | 98 |
skeletal system | 1.75e-15 | 100 |
hemolymphoid system | 2.56e-14 | 108 |
musculoskeletal system | 3.99e-09 | 167 |
lateral plate mesoderm | 2.04e-07 | 203 |