FFCP PHASE1:Hg19::chr10:37004821..37004852,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:37004821..37004852,- | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_at_chr10:37004821..37004852,- | |description=CAGE_peak_at_chr10:37004821..37004852,- | ||
|id=chr10:37004821..37004852,- | |id=chr10:37004821..37004852,- | ||
|ontology_enrichment_celltype=CL:0000054!1.33e-15!2;CL:0000137!1.33e-15!2;CL:0000092!1.33e-15!2;CL:0002195!2.05e-15!2;CL:0002571!2.05e-15!2;CL:0000068!1.09e-10!3;CL:0000069!1.09e-10!3;CL:0000307!1.09e-10!3;CL:0000377!1.09e-10!3 | |ontology_enrichment_celltype=CL:0000054!1.33e-15!2;CL:0000137!1.33e-15!2;CL:0000092!1.33e-15!2;CL:0002195!2.05e-15!2;CL:0002571!2.05e-15!2;CL:0000068!1.09e-10!3;CL:0000069!1.09e-10!3;CL:0000307!1.09e-10!3;CL:0000377!1.09e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000054;5.04e-34;2!CL:0000137;5.04e-34;2!CL:0000092;5.04e-34;2!CL:0002092;6.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.04e-34,2;CL:0000137,5.04e-34,2;CL:0000092,5.04e-34,2;CL:0002092,6.13e-08,10;CL:0000062,2.47e-07,11;CL:0000375,2.47e-07,11;CL:0000335,2.47e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.47e-07;11 | |||
|ontology_enrichment_disease=DOID:0060085!9.99e-30!1;DOID:3165!9.99e-30!1;DOID:0060121!9.99e-30!1;DOID:2438!9.99e-30!1;DOID:4418!9.99e-30!1;DOID:200!1.33e-15!2;DOID:4305!1.33e-15!2;DOID:0060072!1.82e-08!4;DOID:5409!1.96e-08!4 | |ontology_enrichment_disease=DOID:0060085!9.99e-30!1;DOID:3165!9.99e-30!1;DOID:0060121!9.99e-30!1;DOID:2438!9.99e-30!1;DOID:4418!9.99e-30!1;DOID:200!1.33e-15!2;DOID:4305!1.33e-15!2;DOID:0060072!1.82e-08!4;DOID:5409!1.96e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:0060085;2.39e-66;1!DOID:3165;2.39e-66;1!DOID:0060121;2.39e-66;1!DOID:2438;2.39e-66;1!DOID:4418;2.39e-66;1!DOID:200;5.04e-34;2!DOID:4305;5.04e-34;2!DOID:0060072;8.69e-18;4!DOID:5409;1.03e-17;4!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.39e-66,1;DOID:3165,2.39e-66,1;DOID:0060121,2.39e-66,1;DOID:2438,2.39e-66,1;DOID:4418,2.39e-66,1;DOID:200,5.04e-34,2;DOID:4305,5.04e-34,2;DOID:0060072,8.69e-18,4;DOID:5409,1.03e-17,4;DOID:201,2.45e-12,6;DOID:0060100,2.45e-12,6;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9;DOID:7,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002369!6.73e-11!3;UBERON:0001235!6.73e-11!3;UBERON:0006858!6.73e-11!3;UBERON:0000014!1.82e-08!4;UBERON:0001987!2.61e-08!4;UBERON:0004340!2.61e-08!4 | |ontology_enrichment_uberon=UBERON:0002369!6.73e-11!3;UBERON:0001235!6.73e-11!3;UBERON:0006858!6.73e-11!3;UBERON:0000014!1.82e-08!4;UBERON:0001987!2.61e-08!4;UBERON:0004340!2.61e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.62e-23;3!UBERON:0001235;2.62e-23;3!UBERON:0006858;2.62e-23;3!UBERON:0000014;8.69e-18;4!UBERON:0002371;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.62e-23,3;UBERON:0001235,2.62e-23,3;UBERON:0006858,2.62e-23,3;UBERON:0000014,8.69e-18,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8789069586503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5125935958033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9027214524411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8789069586503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5125935958033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9027214524411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:37004821..37004852,- | |short_description=p@chr10:37004821..37004852,- | ||
}} | }} |
Latest revision as of 13:28, 23 July 2015
Short description: | p@chr10:37004821..37004852, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:37004821..37004852, - |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.04e-34 | 2 |
osteocyte | 5.04e-34 | 2 |
osteoclast | 5.04e-34 | 2 |
bone marrow cell | 6.13e-08 | 10 |
osteoblast | 2.47e-07 | 11 |
osteoprogenitor cell | 2.47e-07 | 11 |
mesenchyme condensation cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.62e-23 | 3 |
adrenal cortex | 2.62e-23 | 3 |
adrenal/interrenal gland | 2.62e-23 | 3 |
zone of skin | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.39e-66 | 1 |
skin benign neoplasm | 2.39e-66 | 1 |
integumentary system benign neoplasm | 2.39e-66 | 1 |
dermis tumor | 2.39e-66 | 1 |
cutaneous fibrous histiocytoma | 2.39e-66 | 1 |
giant cell tumor | 5.04e-34 | 2 |
bone giant cell tumor | 5.04e-34 | 2 |
benign neoplasm | 8.69e-18 | 4 |
lung small cell carcinoma | 1.03e-17 | 4 |
connective tissue cancer | 2.45e-12 | 6 |
musculoskeletal system cancer | 2.45e-12 | 6 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |
disease of anatomical entity | 6.60e-08 | 39 |