FFCP PHASE1:Hg19::chr10:46992949..46993010,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:46992949..46993010,+
|short_description=p@chr10:46992949..46993010,+
|description=CAGE_peak_at_chr10:46992949..46993010,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:46992949..46993010,+ | |||
|description=CAGE_peak_at_chr10:46992949..46993010,+ | |||
|id=chr10:46992949..46993010,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.26e-16!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.00e-07;17!CL:0002518;1.00e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.79e-09,253;CL:1000497,1.16e-07,17;CL:0002518,1.16e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.28e-16;29!UBERON:0006595;1.44e-09;86!UBERON:0006215;2.16e-07;3 | |||
|ontology_enrichment_disease=DOID:305!2.98e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.98e-12,106;DOID:0050687,1.59e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.69e-19!129;UBERON:0004185!3.69e-19!129;UBERON:0004119!4.17e-19!169;UBERON:0000925!4.17e-19!169;UBERON:0006595!4.17e-19!169;UBERON:0001007!1.86e-18!155;UBERON:0001555!1.86e-18!155;UBERON:0007026!1.86e-18!155;UBERON:0000481!1.56e-17!347;UBERON:0007023!3.70e-16!115;UBERON:0000064!1.23e-15!219;UBERON:0000062!3.51e-15!511;UBERON:0000077!5.17e-13!130;UBERON:0000063!4.04e-12!97;UBERON:0000153!8.42e-11!129;UBERON:0007811!8.42e-11!129;UBERON:0000922!9.02e-11!612;UBERON:0004121!1.06e-10!169;UBERON:0000065!1.29e-10!53;UBERON:0001008!1.48e-10!45;UBERON:0000477!1.56e-10!286;UBERON:0001041!1.60e-10!98;UBERON:0005743!1.88e-10!86;UBERON:0001017!3.12e-10!82;UBERON:0001004!3.74e-10!72;UBERON:0003075!3.87e-10!86;UBERON:0007284!3.87e-10!86;UBERON:0001049!4.29e-10!57;UBERON:0005068!4.29e-10!57;UBERON:0006241!4.29e-10!57;UBERON:0007135!4.29e-10!57;UBERON:0006554!4.98e-10!44;UBERON:0000924!5.79e-10!173;UBERON:0006601!5.79e-10!173;UBERON:0000033!6.39e-10!123;UBERON:0002616!9.77e-10!59;UBERON:0000464!3.60e-09!104;UBERON:0002346!4.46e-09!90;UBERON:0008947!5.51e-09!38;UBERON:0003258!5.51e-09!38;UBERON:0005911!8.16e-09!82;UBERON:0000923!8.89e-09!604;UBERON:0005291!8.89e-09!604;UBERON:0006598!8.89e-09!604;UBERON:0002532!8.89e-09!604;UBERON:0001557!1.03e-08!19;UBERON:0002050!1.12e-08!605;UBERON:0005423!1.12e-08!605;UBERON:0000955!2.16e-08!69;UBERON:0006238!2.16e-08!69;UBERON:0000072!2.94e-08!46;UBERON:0003064!2.97e-08!37;UBERON:0000489!3.15e-08!32;UBERON:0000073!3.53e-08!94;UBERON:0001016!3.53e-08!94;UBERON:0001737!3.86e-08!9;UBERON:0000466!7.23e-08!126;UBERON:0000468!7.34e-08!659;UBERON:0000467!7.45e-08!625;UBERON:0000480!9.28e-08!626;UBERON:0005177!1.18e-07!107;UBERON:0004111!1.39e-07!241;UBERON:0000475!1.48e-07!365;UBERON:0005409!1.78e-07!35;UBERON:0002113!7.73e-07!27;UBERON:0003918!7.73e-07!27;UBERON:0005095!7.73e-07!27;UBERON:0007687!7.73e-07!27;UBERON:0000483!8.37e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.26e-14;33!UBERON:0001737;7.75e-14;9!UBERON:0001557;7.75e-14;9!UBERON:0005409;4.11e-10;22!UBERON:0002108;4.63e-10;4!UBERON:0000065;6.54e-10;44!UBERON:0000072;4.37e-09;37!UBERON:0002048;5.15e-09;22!UBERON:0000117;5.15e-09;22!UBERON:0000171;5.15e-09;22!UBERON:0000170;5.15e-09;22!UBERON:0000160;8.83e-08;17!UBERON:0006554;9.45e-08;30!UBERON:0001008;9.45e-08;30!UBERON:0001041;2.20e-07;14!UBERON:0001555;9.14e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.06e-24,118;UBERON:0001007,6.13e-23,145;UBERON:0001555,6.13e-23,145;UBERON:0007026,6.13e-23,145;UBERON:0004119,1.56e-21,160;UBERON:0000925,1.56e-21,160;UBERON:0006595,1.56e-21,160;UBERON:0011216,8.16e-16,223;UBERON:0001041,2.64e-15,87;UBERON:0008947,9.36e-15,38;UBERON:0003258,9.36e-15,38;UBERON:0001737,4.27e-14,9;UBERON:0000065,3.20e-12,54;UBERON:0001004,5.48e-12,74;UBERON:0001557,1.24e-10,19;UBERON:0000072,1.70e-10,47;UBERON:0002108,4.28e-10,4;UBERON:0001008,4.73e-09,48;UBERON:0002048,4.77e-09,22;UBERON:0000117,4.77e-09,22;UBERON:0000171,4.77e-09,22;UBERON:0000170,4.77e-09,22;UBERON:0005597,4.77e-09,22;UBERON:0000118,4.77e-09,22;UBERON:0005177,9.23e-09,101;UBERON:0005911,9.28e-09,82;UBERON:0005409,1.13e-08,25;UBERON:0005153,1.61e-08,37;UBERON:0006554,2.52e-08,47;UBERON:0000160,8.38e-08,17;UBERON:0000489,3.98e-07,31;UBERON:0004111,6.69e-07,240;UBERON:0005157,8.99e-07,47;UBERON:0005423,9.99e-07,581 | |||
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| ||
|short_description=p@chr10:46992949..46993010,+ | |||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:46992949..46993010, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:46992949..46993010, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.79e-09 | 253 |
kidney cell | 1.16e-07 | 17 |
kidney epithelial cell | 1.16e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.06e-24 | 118 |
digestive system | 6.13e-23 | 145 |
digestive tract | 6.13e-23 | 145 |
primitive gut | 6.13e-23 | 145 |
endoderm-derived structure | 1.56e-21 | 160 |
endoderm | 1.56e-21 | 160 |
presumptive endoderm | 1.56e-21 | 160 |
organ system subdivision | 8.16e-16 | 223 |
foregut | 2.64e-15 | 87 |
respiratory primordium | 9.36e-15 | 38 |
endoderm of foregut | 9.36e-15 | 38 |
larynx | 4.27e-14 | 9 |
respiratory tract | 3.20e-12 | 54 |
respiratory system | 5.48e-12 | 74 |
upper respiratory tract | 1.24e-10 | 19 |
segment of respiratory tract | 1.70e-10 | 47 |
small intestine | 4.28e-10 | 4 |
renal system | 4.73e-09 | 48 |
lung | 4.77e-09 | 22 |
respiratory tube | 4.77e-09 | 22 |
respiration organ | 4.77e-09 | 22 |
pair of lungs | 4.77e-09 | 22 |
lung primordium | 4.77e-09 | 22 |
lung bud | 4.77e-09 | 22 |
trunk region element | 9.23e-09 | 101 |
endo-epithelium | 9.28e-09 | 82 |
gastrointestinal system | 1.13e-08 | 25 |
epithelial bud | 1.61e-08 | 37 |
urinary system structure | 2.52e-08 | 47 |
intestine | 8.38e-08 | 17 |
cavitated compound organ | 3.98e-07 | 31 |
anatomical conduit | 6.69e-07 | 240 |
epithelial fold | 8.99e-07 | 47 |
developing anatomical structure | 9.99e-07 | 581 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.98e-12 | 106 |
cell type cancer | 1.59e-07 | 143 |