FFCP PHASE1:Hg19::chr10:62487982..62488001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:62487982..62488001,- | |||
|description=CAGE_peak_at_chr10:62487982..62488001,- | |description=CAGE_peak_at_chr10:62487982..62488001,- | ||
|id=chr10:62487982..62488001,- | |id=chr10:62487982..62488001,- | ||
|ontology_enrichment_celltype=CL:0000791!1.72e-31!18;CL:0000789!1.72e-31!18;CL:0002420!1.72e-31!18;CL:0002419!1.72e-31!18;CL:0000790!1.72e-31!18;CL:0000084!1.64e-21!25;CL:0000827!1.64e-21!25;CL:0000625!5.12e-19!11;CL:0000838!5.11e-16!52;CL:0000542!1.30e-15!53;CL:0000051!1.30e-15!53;CL:0000738!6.97e-12!140;CL:0000624!7.13e-12!6;CL:0002087!5.16e-11!119;CL:0000623!5.77e-09!3;CL:0000825!5.77e-09!3;CL:0000842!1.21e-08!3;CL:0000037!3.49e-08!172;CL:0000566!3.49e-08!172;CL:0002031!1.11e-07!124;CL:0000988!2.58e-07!182;CL:0002032!9.97e-07!165;CL:0000837!9.97e-07!165 | |ontology_enrichment_celltype=CL:0000791!1.72e-31!18;CL:0000789!1.72e-31!18;CL:0002420!1.72e-31!18;CL:0002419!1.72e-31!18;CL:0000790!1.72e-31!18;CL:0000084!1.64e-21!25;CL:0000827!1.64e-21!25;CL:0000625!5.12e-19!11;CL:0000838!5.11e-16!52;CL:0000542!1.30e-15!53;CL:0000051!1.30e-15!53;CL:0000738!6.97e-12!140;CL:0000624!7.13e-12!6;CL:0002087!5.16e-11!119;CL:0000623!5.77e-09!3;CL:0000825!5.77e-09!3;CL:0000842!1.21e-08!3;CL:0000037!3.49e-08!172;CL:0000566!3.49e-08!172;CL:0002031!1.11e-07!124;CL:0000988!2.58e-07!182;CL:0002032!9.97e-07!165;CL:0000837!9.97e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.51e-26;18!CL:0000789;5.51e-26;18!CL:0002419;5.51e-26;18!CL:0000624;1.06e-20;6!CL:0000084;1.98e-18;25!CL:0002573;1.06e-11;2!CL:0000625;3.00e-11;11!CL:0000623;4.42e-11;3!CL:0000895;6.21e-09;1!CL:0000542;2.75e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.92e-26,18;CL:0000789,2.92e-26,18;CL:0002420,2.92e-26,18;CL:0002419,2.92e-26,18;CL:0000790,2.92e-26,18;CL:0000624,3.80e-21,6;CL:0000084,1.27e-18,25;CL:0000827,1.27e-18,25;CL:0000838,7.03e-16,52;CL:0000542,1.52e-15,53;CL:0000051,1.52e-15,53;CL:0002573,1.03e-11,2;CL:0000625,3.09e-11,11;CL:0000623,6.65e-11,3;CL:0000825,6.65e-11,3;CL:0000810,3.58e-09,1;CL:0000895,3.58e-09,1;CL:0002436,3.58e-09,1;CL:0002427,3.58e-09,1;CL:0002428,3.58e-09,1;CL:0002429,3.58e-09,1;CL:0002433,3.58e-09,1;CL:0002431,3.58e-09,1;CL:0002432,3.58e-09,1;CL:0000738,2.43e-08,136;CL:0002087,2.25e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;5.51e-26;18!CL:0002427;6.21e-09;1!CL:0000051;2.75e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.60e-09;1!DOID:4960;6.21e-09;1!DOID:0070004;6.21e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.60e-09,1;DOID:4960,5.75e-09,1;DOID:0070004,5.75e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.15e-12!7;UBERON:0002370!7.39e-11!4;UBERON:0005058!7.39e-11!4;UBERON:0009113!7.39e-11!4;UBERON:0003295!7.39e-11!4;UBERON:0005562!7.39e-11!4;UBERON:0003408!7.04e-09!10;UBERON:0009722!4.63e-08!11;UBERON:0007690!4.63e-08!11;UBERON:0000178!7.32e-08!15;UBERON:0000179!7.32e-08!15;UBERON:0000463!7.32e-08!15;UBERON:0003351!3.14e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,5.90129310341499,1.96505381374582,1.85041349099558,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0.164437904603676,0,0,4.15202376853769,9.09638815505025,7.31748666634838,0,1.91610246800961,2.74901956386104,4.30133476433155,1.27426165729639,0,0.950452044448374,1.20460095262218,0.895906278080929,0,1.89421801635213,0.821127996921047,0.80642697289893,1.33720097891754,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,1.37921532141349,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.72571360654893,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,1.23408681925858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,1.78093928036649,0,0,0,0.828851746593443,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.398594520940089,1.63565394255844,0,0,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1168385951419,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,7.92824404894788,6.39100535693683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,0.744896571550295,0,0,0.202117188958219,0,0,0.673520530145875,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:62487982..62488001,- | |short_description=p@chr10:62487982..62488001,- | ||
}} | }} |
Latest revision as of 14:30, 23 July 2015
Short description: | p@chr10:62487982..62488001, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:62487982..62488001, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.92e-26 | 18 |
alpha-beta T cell | 2.92e-26 | 18 |
immature T cell | 2.92e-26 | 18 |
mature T cell | 2.92e-26 | 18 |
immature alpha-beta T cell | 2.92e-26 | 18 |
CD4-positive, alpha-beta T cell | 3.80e-21 | 6 |
T cell | 1.27e-18 | 25 |
pro-T cell | 1.27e-18 | 25 |
lymphoid lineage restricted progenitor cell | 7.03e-16 | 52 |
lymphocyte | 1.52e-15 | 53 |
common lymphoid progenitor | 1.52e-15 | 53 |
Schwann cell | 1.03e-11 | 2 |
CD8-positive, alpha-beta T cell | 3.09e-11 | 11 |
natural killer cell | 6.65e-11 | 3 |
pro-NK cell | 6.65e-11 | 3 |
CD4-positive, alpha-beta thymocyte | 3.58e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.58e-09 | 1 |
mature CD4 single-positive thymocyte | 3.58e-09 | 1 |
resting double-positive thymocyte | 3.58e-09 | 1 |
double-positive blast | 3.58e-09 | 1 |
CD69-positive double-positive thymocyte | 3.58e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.58e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.58e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.58e-09 | 1 |
leukocyte | 2.43e-08 | 136 |
nongranular leukocyte | 2.25e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.60e-09 | 1 |
bone marrow cancer | 5.75e-09 | 1 |
myeloma | 5.75e-09 | 1 |