FFCP PHASE1:Hg19::chr10:73823970..73824002,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:73823970..73824002,- to FFCP PHASE1:Hg19::chr10:73823970..73824002,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:73823970..73824002,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_at_chr10:73823970..73824002,- | |||
|id=chr10:73823970..73824002,- | |||
|ontology_enrichment_celltype=CL:0000791!1.38e-13!18;CL:0000789!1.38e-13!18;CL:0002420!1.38e-13!18;CL:0002419!1.38e-13!18;CL:0000790!1.38e-13!18;CL:0000624!2.78e-10!6;CL:0000084!8.95e-09!25;CL:0000827!8.95e-09!25;CL:0000838!5.31e-07!52;CL:0000542!8.89e-07!53;CL:0000051!8.89e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.27e-12;18!CL:0000789;2.27e-12;18!CL:0002419;2.27e-12;18!CL:0000624;3.75e-10;6!CL:0000623;1.62e-09;3!CL:0000898;2.98e-09;3!CL:0000084;9.52e-09;25!CL:0000895;1.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.33e-12,18;CL:0000789,2.33e-12,18;CL:0002420,2.33e-12,18;CL:0002419,2.33e-12,18;CL:0000790,2.33e-12,18;CL:0000624,4.47e-10,6;CL:0000623,2.53e-09,3;CL:0000825,2.53e-09,3;CL:0000898,3.69e-09,3;CL:0000084,9.69e-09,25;CL:0000827,9.69e-09,25;CL:0000838,1.93e-08,52;CL:0000542,2.96e-08,53;CL:0000051,2.96e-08,53;CL:0000810,1.91e-07,1;CL:0000895,1.91e-07,1;CL:0002436,1.91e-07,1;CL:0002427,1.91e-07,1;CL:0002428,1.91e-07,1;CL:0002429,1.91e-07,1;CL:0002433,1.91e-07,1;CL:0002431,1.91e-07,1;CL:0002432,1.91e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.27e-12;18!UBERON:0006215;2.98e-09;3!CL:0002427;1.48e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-34!115;UBERON:0001049!3.83e-26!57;UBERON:0005068!3.83e-26!57;UBERON:0006241!3.83e-26!57;UBERON:0007135!3.83e-26!57;UBERON:0001017!9.43e-22!82;UBERON:0002616!1.28e-21!59;UBERON:0005743!2.81e-21!86;UBERON:0000955!1.62e-19!69;UBERON:0006238!1.62e-19!69;UBERON:0000073!4.09e-18!94;UBERON:0001016!4.09e-18!94;UBERON:0002780!3.80e-17!41;UBERON:0001890!3.80e-17!41;UBERON:0006240!3.80e-17!41;UBERON:0002020!7.63e-17!34;UBERON:0003528!7.63e-17!34;UBERON:0003075!1.20e-16!86;UBERON:0007284!1.20e-16!86;UBERON:0003080!1.43e-16!42;UBERON:0001893!1.57e-16!34;UBERON:0001869!3.13e-16!32;UBERON:0002791!1.29e-15!33;UBERON:0002346!2.02e-15!90;UBERON:0000153!1.18e-12!129;UBERON:0007811!1.18e-12!129;UBERON:0002619!2.71e-12!22;UBERON:0003076!3.32e-11!15;UBERON:0003057!3.32e-11!15;UBERON:0000033!1.33e-10!123;UBERON:0000956!2.10e-10!25;UBERON:0000203!2.10e-10!25;UBERON:0003056!3.62e-10!61;UBERON:0001950!5.86e-10!20;UBERON:0004733!9.45e-10!12;UBERON:0002028!9.45e-10!12;UBERON:0007277!9.45e-10!12;UBERON:0004732!7.66e-09!13;UBERON:0002308!1.69e-08!9;UBERON:0000125!1.69e-08!9;UBERON:0000369!1.39e-07!4;UBERON:0002435!1.39e-07!4;UBERON:0000204!1.39e-07!4;UBERON:0010082!1.39e-07!4;UBERON:0004121!3.16e-07!169;UBERON:0000924!8.02e-07!173;UBERON:0006601!8.02e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;1.48e-07;1!UBERON:0011158;1.48e-07;1!UBERON:0003128;1.48e-07;1!UBERON:0001703;1.48e-07;1!UBERON:0002241;1.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,8.28e-08,1;UBERON:0011158,8.28e-08,1;UBERON:0003128,8.28e-08,1;UBERON:0001703,8.28e-08,1;UBERON:0002241,8.28e-08,1;UBERON:0004761,8.28e-08,1;UBERON:0009617,8.28e-08,1;UBERON:0002370,2.63e-07,4;UBERON:0005058,2.63e-07,4;UBERON:0009113,2.63e-07,4;UBERON:0003295,2.63e-07,4;UBERON:0005562,2.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,1.12101712596307,0,0.393419540227666,5.89516144123747,0.822405995998037,0.668745981562712,0.32592226663359,0,1.94826728407911,1.33692548262208,1.17842362989935,1.55073726208535,0.812411591295047,0.896639238079726,1.1705341280389,0.493313713811028,0.829050053357545,0.579606171470105,1.03800594213442,1.33770414044857,1.04535523804977,0.113309342697566,1.14966148080576,0.68725489096526,0.759059076058509,0,0,0,0.752875595388864,0.76791966692651,0,0.710331756132051,0,2.01606743224732,4.01160293675261,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,2.58753089831421,1.02674429023799,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,1.52581736317083,0.774054819518572,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0.782205530939212,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.425246896606173,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,0.52893040697076,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.625954653532499,0.573409195690071,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.319267718114302,0.82046545696302,0,0.484100767249525,1.61475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0.781078098613847,1.03343398250592,0.126831620387814,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.40781839786099,0.263091094251396,0,0,0,0.942693539496011,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,5.9567785821453,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,0,0,0.392616934229891,0,0.8453114551668,0,0.375935671919414,0,0,0,0,0,0,0.458729283404541,0,0,0.883889372481891,0,0,0,0,0,0,0,0,0,0,0,0,1.43979526614655,0,1.65833887891756,0.20686599172379,0,0,2.64814530327625,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,1.12101712596307,0,0.393419540227666,5.89516144123747,0.822405995998037,0.668745981562712,0.32592226663359,0,1.94826728407911,1.33692548262208,1.17842362989935,1.55073726208535,0.812411591295047,0.896639238079726,1.1705341280389,0.493313713811028,0.829050053357545,0.579606171470105,1.03800594213442,1.33770414044857,1.04535523804977,0.113309342697566,1.14966148080576,0.68725489096526,0.759059076058509,0,0,0,0.752875595388864,0.76791966692651,0,0.710331756132051,0,2.01606743224732,4.01160293675261,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,2.58753089831421,1.02674429023799,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,1.52581736317083,0.774054819518572,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0.782205530939212,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.425246896606173,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,0.52893040697076,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.625954653532499,0.573409195690071,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.319267718114302,0.82046545696302,0,0.484100767249525,1.61475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0.781078098613847,1.03343398250592,0.126831620387814,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.40781839786099,0.263091094251396,0,0,0,0.942693539496011,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,5.9567785821453,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,0,0,0.392616934229891,0,0.8453114551668,0,0.375935671919414,0,0,0,0,0,0,0.458729283404541,0,0,0.883889372481891,0,0,0,0,0,0,0,0,0,0,0,0,1.43979526614655,0,1.65833887891756,0.20686599172379,0,0,2.64814530327625,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr10:73823970..73824002,- | |||
}} | }} |
Latest revision as of 15:23, 23 July 2015
Short description: | p@chr10:73823970..73824002, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73823970..73824002, - |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.33e-12 | 18 |
alpha-beta T cell | 2.33e-12 | 18 |
immature T cell | 2.33e-12 | 18 |
mature T cell | 2.33e-12 | 18 |
immature alpha-beta T cell | 2.33e-12 | 18 |
CD4-positive, alpha-beta T cell | 4.47e-10 | 6 |
natural killer cell | 2.53e-09 | 3 |
pro-NK cell | 2.53e-09 | 3 |
naive T cell | 3.69e-09 | 3 |
T cell | 9.69e-09 | 25 |
pro-T cell | 9.69e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.93e-08 | 52 |
lymphocyte | 2.96e-08 | 53 |
common lymphoid progenitor | 2.96e-08 | 53 |
CD4-positive, alpha-beta thymocyte | 1.91e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.91e-07 | 1 |
mature CD4 single-positive thymocyte | 1.91e-07 | 1 |
resting double-positive thymocyte | 1.91e-07 | 1 |
double-positive blast | 1.91e-07 | 1 |
CD69-positive double-positive thymocyte | 1.91e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.91e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.91e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
olfactory region | 8.28e-08 | 1 |
primary subdivision of skull | 8.28e-08 | 1 |
cranium | 8.28e-08 | 1 |
neurocranium | 8.28e-08 | 1 |
chondrocranium | 8.28e-08 | 1 |
cartilaginous neurocranium | 8.28e-08 | 1 |
head paraxial mesoderm | 8.28e-08 | 1 |
thymus | 2.63e-07 | 4 |
hemolymphoid system gland | 2.63e-07 | 4 |
thymic region | 2.63e-07 | 4 |
pharyngeal gland | 2.63e-07 | 4 |
thymus primordium | 2.63e-07 | 4 |