FFCP PHASE1:Hg19::chr10:77571895..77571899,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:77571895..77571899,+ | |||
|coexpression_cluster_id=C3048 | |coexpression_cluster_id=C3048 | ||
|description=CAGE_peak_at_chr10:77571895..77571899,+ | |description=CAGE_peak_at_chr10:77571895..77571899,+ | ||
|id=chr10:77571895..77571899,+ | |id=chr10:77571895..77571899,+ | ||
|ontology_enrichment_celltype=CL:0000557!5.82e-23!71;CL:0002194!5.93e-23!63;CL:0000576!5.93e-23!63;CL:0000040!5.93e-23!63;CL:0000559!5.93e-23!63;CL:0000839!2.68e-22!70;CL:0002009!1.36e-21!65;CL:0000763!5.12e-19!112;CL:0000049!5.12e-19!112;CL:0000766!8.26e-19!76;CL:0002057!6.68e-18!42;CL:0000860!2.97e-17!45;CL:0000037!7.37e-10!172;CL:0000566!7.37e-10!172;CL:0002087!2.03e-09!119;CL:0002032!3.87e-09!165;CL:0000837!3.87e-09!165;CL:0000988!3.95e-09!182;CL:0002031!2.40e-08!124;CL:0000738!2.05e-07!140 | |ontology_enrichment_celltype=CL:0000557!5.82e-23!71;CL:0002194!5.93e-23!63;CL:0000576!5.93e-23!63;CL:0000040!5.93e-23!63;CL:0000559!5.93e-23!63;CL:0000839!2.68e-22!70;CL:0002009!1.36e-21!65;CL:0000763!5.12e-19!112;CL:0000049!5.12e-19!112;CL:0000766!8.26e-19!76;CL:0002057!6.68e-18!42;CL:0000860!2.97e-17!45;CL:0000037!7.37e-10!172;CL:0000566!7.37e-10!172;CL:0002087!2.03e-09!119;CL:0002032!3.87e-09!165;CL:0000837!3.87e-09!165;CL:0000988!3.95e-09!182;CL:0002031!2.40e-08!124;CL:0000738!2.05e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000576;3.62e-10;48!CL:0002619;7.22e-09;3!CL:0000763;6.58e-08;100!CL:0000766;1.06e-07;69!CL:0002393;5.06e-07;6!CL:0002397;5.06e-07;6!CL:0002138;5.06e-07;6!CL:0000860;8.29e-07;33!CL:0002057;8.29e-07;33!CL:0000473;9.49e-07;39!CL:0000234;9.49e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.28e-19,108;CL:0000049,2.28e-19,108;CL:0000557,4.13e-18,67;CL:0000839,6.64e-17,66;CL:0000766,5.76e-15,72;CL:0002194,9.59e-15,59;CL:0000576,9.59e-15,59;CL:0000040,9.59e-15,59;CL:0000559,9.59e-15,59;CL:0002009,4.41e-14,61;CL:0000473,1.94e-12,48;CL:0000234,1.94e-12,48;CL:0000037,9.53e-12,168;CL:0000860,2.87e-11,42;CL:0002057,2.87e-11,42;CL:0002032,6.02e-11,161;CL:0000837,6.02e-11,161;CL:0000988,1.12e-10,177;CL:0002619,4.70e-09,3;CL:0002031,2.20e-07,120;CL:0002087,3.53e-07,115;CL:0000738,3.83e-07,136;CL:0005020,6.81e-07,6;CL:0002138,6.81e-07,6;CL:0005022,6.81e-07,6;CL:0002393,7.05e-07,9;CL:0002397,7.05e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.33e-09;42!CL:0000049;3.90e-07;108!CL:0005022;5.06e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.78e-21!112;UBERON:0002405!1.18e-20!115;UBERON:0002371!7.29e-20!80;UBERON:0002390!1.09e-19!102;UBERON:0003061!1.09e-19!102;UBERON:0001474!8.53e-18!86;UBERON:0007023!6.13e-16!115;UBERON:0004765!5.45e-14!101;UBERON:0001434!5.45e-14!101;UBERON:0000062!2.62e-07!511 | |ontology_enrichment_uberon=UBERON:0002193!6.78e-21!112;UBERON:0002405!1.18e-20!115;UBERON:0002371!7.29e-20!80;UBERON:0002390!1.09e-19!102;UBERON:0003061!1.09e-19!102;UBERON:0001474!8.53e-18!86;UBERON:0007023!6.13e-16!115;UBERON:0004765!5.45e-14!101;UBERON:0001434!5.45e-14!101;UBERON:0000062!2.62e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.02e-16,108;UBERON:0002405,4.99e-16,93;UBERON:0002371,3.53e-15,76;UBERON:0001474,1.37e-13,82;UBERON:0002390,1.74e-13,98;UBERON:0003061,1.74e-13,98;UBERON:0004765,8.32e-12,90;UBERON:0001434,5.39e-10,100 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.229240217243854,0.0821005894499457,0.314843125254717,0,0,0,0,0,0,0,0,0.587200878669695,1.66198622559563,2.60707781711184,1.73608696572681,2.68698569087909,1.6194683300949,2.06060454107349,0.436194716338694,1.13362783106643,1.4555043671269,0.464858073811369,0.822335776043652,0.309706370895104,0,0.512321413058201,0.709446689665756,0.344745680736619,0.645484683583826,1.35426486594342,0,1.36453075028923,0.449446968890169,1.22433556948361,0,1.91801137739712,0.329851300186716,1.39624560335142,0.426224750532694,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,1.52032191293582,0.605399502633369,0.368277635987565,1.26584954976354,0.633765858935825,0.212604299965044,1.04829322754188,1.34794357375794,0.901061357049038,1.76798145366788,0.570025487482497,0.19891667719909,1.0959849225878,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.523916301990851,0,0,0.649094787309367,1.39303789839414,0.930705723632056,0.476981248610684,0,0,0,0,0,0,0,0,0,1.03366703667732,2.49036383880697,1.33888245105868,0,0.760272105718513,0,0,0,0.267899184852239,0,0.563057402416611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,1.52203321787679,0,0,2.21595305478658,0.936017060556951,1.93220510975347,0,0,0,0.0895585227028483,0,0,0,1.05658120815871,1.03664057770386,0,2.27236380167484,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.50999940573032,0.853820462427555,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0.633309773357254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0.577566499444116,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0.192190067365106,1.02090169995667,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.97701981631236,0.43050537267123,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0.213425530045242,0,0,0.191505370132367,1.2700414963433,2.59697552219644,5.33514638415572,0.912938716132769,0.156679895773023,12.5317238545034,0,0,0.605399121573143,5.11015485228392,1.71752672377882,0.614481528616916,0.223676107892416,0.667396566847634,1.17232857241224,0,0,0,0,1.4098700508785,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.556543525114529,0,0,1.39473591775749,0.276283915531148,0.503865495708552,0,1.96935688737711,0,0,0.179021174675609,1.53471711068062,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.230850775511391,0.341826167541004,0,0,0.434589487688032,0,0,0,0,0,0.997270091400938,0,0,0,0,0,0,0,0.989471500037586,0.216388639742091,0,0.265372693510018,0,0.593042257361244,0.247127877893006,0.208843899010911,0.269604531922708,0.802577647298789,0,0,0.19566461893209,0,1.18375320854817,2.41981432097328,0,1.45329133145522,0.150323419414493,0,0,0,0,0,0.853828638089378,0,0,0,0.0870592065804026,0.873633341210151,0.171986032471617,0.0967563312890851,0,0.164230914106418,0.387956065953678,0,0.225980740780532,0,0.397429223405979,0.316553979779393,0.782205530939212,0.240476460754601,1.06726497369676,0.799238438328521,0.144090417154106,0,2.23073497220554,0,0.372757606696298,0,0,0.104602846312333,0.101998217636322,0,0,1.09524303113594,1.27746588066972,0,0,0.279282401272254,1.60412296808179,0,1.59743200399193,0.858452096273142,0,0.335917362433631,0,0,0.551482276150566,0.247247575143499,0.606631894687664,0.196854963029498,0,0,0.953423842781029,0,0,0,0,0,0.303747783290123,0,0.709251365692784,0.262272940674991,0,0.35857467866569,0,3.57347663186684,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.517131825446202,0.39669780522807,0.684347351537318,0,0.640724475406168,2.04365596629566,2.48543433208317,0,0,0,0,1.08803560673895,0.5013797880454,0.612691153526923,0.327872630709804,0,0.886068179966986,0,0.250381861413,0.573409195690071,0.665574309221114,0.807253238237985,0,0,1.36484205787483,0.570930667089935,0,0,0,0,0,0.554805861502613,0,0,0.889811221596536,0,0,0,0,0,1.34940933649081,0.155262956876259,0,0,0,0,0,0,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|short_description=p@chr10:77571895..77571899,+ | |short_description=p@chr10:77571895..77571899,+ | ||
}} | }} |
Latest revision as of 15:45, 23 July 2015
Short description: | p@chr10:77571895..77571899, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:77571895..77571899, + |
Coexpression cluster: | C3048_acute_Hepatocyte_duodenum_CD14_hepatoblastoma_myelodysplastic_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.28e-19 | 108 |
common myeloid progenitor | 2.28e-19 | 108 |
granulocyte monocyte progenitor cell | 4.13e-18 | 67 |
myeloid lineage restricted progenitor cell | 6.64e-17 | 66 |
myeloid leukocyte | 5.76e-15 | 72 |
monopoietic cell | 9.59e-15 | 59 |
monocyte | 9.59e-15 | 59 |
monoblast | 9.59e-15 | 59 |
promonocyte | 9.59e-15 | 59 |
macrophage dendritic cell progenitor | 4.41e-14 | 61 |
defensive cell | 1.94e-12 | 48 |
phagocyte | 1.94e-12 | 48 |
hematopoietic stem cell | 9.53e-12 | 168 |
classical monocyte | 2.87e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-11 | 42 |
hematopoietic oligopotent progenitor cell | 6.02e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.02e-11 | 161 |
hematopoietic cell | 1.12e-10 | 177 |
adult endothelial progenitor cell | 4.70e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 2.20e-07 | 120 |
nongranular leukocyte | 3.53e-07 | 115 |
leukocyte | 3.83e-07 | 136 |
lymphangioblast | 6.81e-07 | 6 |
endothelial cell of lymphatic vessel | 6.81e-07 | 6 |
vascular lymphangioblast | 6.81e-07 | 6 |
intermediate monocyte | 7.05e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.02e-16 | 108 |
immune system | 4.99e-16 | 93 |
bone marrow | 3.53e-15 | 76 |
bone element | 1.37e-13 | 82 |
hematopoietic system | 1.74e-13 | 98 |
blood island | 1.74e-13 | 98 |
skeletal element | 8.32e-12 | 90 |
skeletal system | 5.39e-10 | 100 |