FFCP PHASE1:Hg19::chr10:90973762..90973771,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90973762..90973771,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90973762..90973771,- | |description=CAGE_peak_at_chr10:90973762..90973771,- | ||
|id=chr10:90973762..90973771,- | |id=chr10:90973762..90973771,- | ||
|ontology_enrichment_celltype=CL:0000235!4.62e-13!10;CL:0002619!4.26e-09!3;CL:0002194!1.64e-08!63;CL:0000576!1.64e-08!63;CL:0000040!1.64e-08!63;CL:0000559!1.64e-08!63;CL:0002009!3.97e-08!65;CL:0000839!2.86e-07!70;CL:0000557!4.10e-07!71 | |ontology_enrichment_celltype=CL:0000235!4.62e-13!10;CL:0002619!4.26e-09!3;CL:0002194!1.64e-08!63;CL:0000576!1.64e-08!63;CL:0000040!1.64e-08!63;CL:0000559!1.64e-08!63;CL:0002009!3.97e-08!65;CL:0000839!2.86e-07!70;CL:0000557!4.10e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000840;4.86e-43;5!CL:0000990;5.12e-29;8!CL:0000451;6.61e-24;10!CL:0000235;6.48e-20;6!CL:0002541;1.14e-10;3!CL:0002188;6.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.86e-43,5;CL:0001029,4.86e-43,5;CL:0000990,5.12e-29,8;CL:0000451,6.61e-24,10;CL:0000235,6.48e-20,6;CL:0002194,3.45e-12,59;CL:0000576,3.45e-12,59;CL:0000040,3.45e-12,59;CL:0000559,3.45e-12,59;CL:0002009,8.32e-12,61;CL:0000839,5.98e-11,66;CL:0000557,8.57e-11,67;CL:0002541,1.20e-10,3;CL:0000766,4.48e-10,72;CL:0002188,6.39e-07,5;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.14e-10;3!UBERON:0000920;1.14e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.20e-10,3;UBERON:0002371,1.44e-09,76;UBERON:0001474,6.78e-09,82;UBERON:0004765,3.90e-08,90;UBERON:0002405,6.96e-08,93;UBERON:0002390,1.70e-07,98;UBERON:0003061,1.70e-07,98;UBERON:0001434,2.36e-07,100;UBERON:0002193,7.91e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51730569212962,3.48259474598534,3.0580330919339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0.936017060556951,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,2.43247561282381,0.502257091432126,6.32501818449095,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51730569212962,3.48259474598534,3.0580330919339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0.936017060556951,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,2.43247561282381,0.502257091432126,6.32501818449095,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:90973762..90973771,- | |short_description=p@chr10:90973762..90973771,- | ||
}} | }} |
Latest revision as of 16:33, 23 July 2015
Short description: | p@chr10:90973762..90973771, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90973762..90973771, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.86e-43 | 5 |
common dendritic progenitor | 4.86e-43 | 5 |
conventional dendritic cell | 5.12e-29 | 8 |
dendritic cell | 6.61e-24 | 10 |
macrophage | 6.48e-20 | 6 |
monopoietic cell | 3.45e-12 | 59 |
monocyte | 3.45e-12 | 59 |
monoblast | 3.45e-12 | 59 |
promonocyte | 3.45e-12 | 59 |
macrophage dendritic cell progenitor | 8.32e-12 | 61 |
myeloid lineage restricted progenitor cell | 5.98e-11 | 66 |
granulocyte monocyte progenitor cell | 8.57e-11 | 67 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
myeloid leukocyte | 4.48e-10 | 72 |
glomerular endothelial cell | 6.39e-07 | 5 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.20e-10 | 3 |
bone marrow | 1.44e-09 | 76 |
bone element | 6.78e-09 | 82 |
skeletal element | 3.90e-08 | 90 |
immune system | 6.96e-08 | 93 |
hematopoietic system | 1.70e-07 | 98 |
blood island | 1.70e-07 | 98 |
skeletal system | 2.36e-07 | 100 |
hemolymphoid system | 7.91e-07 | 108 |