FFCP PHASE1:Hg19::chr11:110199119..110199147,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001pkv.1_5end | |association_with_transcript=0bp_to_uc001pkv.1_5end | ||
|cluster_id=chr11:110199119..110199147,+ | |||
|description=CAGE_peak_1_at_uc001pkv.1_5end | |description=CAGE_peak_1_at_uc001pkv.1_5end | ||
|id=chr11:110199119..110199147,+ | |id=chr11:110199119..110199147,+ | ||
|ontology_enrichment_celltype=CL:0000542!4.12e-21!53;CL:0000051!4.12e-21!53;CL:0000838!5.23e-20!52;CL:0002139!4.46e-19!24;CL:0000071!5.61e-14!18;CL:0002546!5.61e-14!18;CL:0000115!2.73e-11!35;CL:0000945!3.01e-10!24;CL:0000826!3.01e-10!24;CL:0000084!2.28e-08!25;CL:0000827!2.28e-08!25;CL:0002078!6.40e-08!44;CL:0002087!1.26e-07!119;CL:0000039!3.18e-07!7;CL:0000586!3.18e-07!7;CL:0002543!4.48e-07!6 | |ontology_enrichment_celltype=CL:0000542!4.12e-21!53;CL:0000051!4.12e-21!53;CL:0000838!5.23e-20!52;CL:0002139!4.46e-19!24;CL:0000071!5.61e-14!18;CL:0002546!5.61e-14!18;CL:0000115!2.73e-11!35;CL:0000945!3.01e-10!24;CL:0000826!3.01e-10!24;CL:0000084!2.28e-08!25;CL:0000827!2.28e-08!25;CL:0002078!6.40e-08!44;CL:0002087!1.26e-07!119;CL:0000039!3.18e-07!7;CL:0000586!3.18e-07!7;CL:0002543!4.48e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.04e-35;24!CL:0000071;6.56e-30;18!CL:0000115;5.48e-19;36!CL:0002618;3.64e-15;3!CL:0002543;6.22e-13;6!CL:1000413;7.79e-13;9!CL:0000945;1.99e-11;24!CL:0002078;3.42e-11;45!CL:0000213;2.51e-08;58!CL:0000215;2.51e-08;58!CL:0002144;9.41e-08;3!CL:0002544;1.07e-07;6!CL:0002138;1.36e-07;6!CL:0000542;9.13e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.30e-36,24;CL:0000071,3.39e-30,18;CL:0002546,3.39e-30,18;CL:0000115,7.28e-23,36;CL:0002078,1.14e-17,45;CL:0002618,4.98e-15,3;CL:1000413,4.09e-13,9;CL:0000213,5.07e-13,58;CL:0000215,5.07e-13,58;CL:0002543,7.29e-13,6;CL:0000542,4.30e-12,53;CL:0000051,4.30e-12,53;CL:0000945,2.00e-11,24;CL:0000826,2.00e-11,24;CL:0000838,1.68e-10,52;CL:0000076,1.78e-08,63;CL:0002144,8.55e-08,3;CL:0002544,9.04e-08,6;CL:0005020,1.72e-07,6;CL:0002138,1.72e-07,6;CL:0005022,1.72e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.56e-30;18!CL:0005022;1.36e-07;6!CL:0000051;9.13e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.95e-07!10;DOID:299!2.31e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.30e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.15e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.61e-14!18;UBERON:0004638!5.61e-14!18;UBERON:0004852!5.61e-14!18;UBERON:0000487!1.00e-10!22;UBERON:0002294!1.25e-10!7;UBERON:0001173!1.25e-10!7;UBERON:0004912!1.25e-10!7;UBERON:0006914!5.46e-09!25;UBERON:0004177!2.96e-07!7;UBERON:0002394!6.68e-07!4;UBERON:0003928!6.68e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.56e-30;18!UBERON:0001986;6.56e-30;18!UBERON:0004852;6.56e-30;18!UBERON:0000487;4.58e-24;22!UBERON:0006914;6.56e-21;25!UBERON:0000490;9.62e-17;33!UBERON:0003915;7.79e-13;9!UBERON:0004700;7.79e-13;9!UBERON:0001917;7.79e-13;9!UBERON:0002394;3.04e-11;4!UBERON:0003928;3.04e-11;4!UBERON:0002294;4.24e-11;7!UBERON:0001173;4.24e-11;7!UBERON:0002370;5.37e-11;2!UBERON:0005058;5.37e-11;2!UBERON:0009113;5.37e-11;2!UBERON:0004177;2.76e-09;5!UBERON:0005057;2.76e-09;5!UBERON:0002066;2.76e-09;5!UBERON:0001638;1.20e-08;9!UBERON:0003920;1.20e-08;9!UBERON:0004582;1.20e-08;9!UBERON:0010523;9.41e-08;3!UBERON:0001915;9.41e-08;3!UBERON:0001982;9.41e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.39e-30,18;UBERON:0001986,3.39e-30,18;UBERON:0004852,3.39e-30,18;UBERON:0000487,2.69e-24,22;UBERON:0006914,4.12e-21,25;UBERON:0003915,4.09e-13,9;UBERON:0004700,4.09e-13,9;UBERON:0001917,4.09e-13,9;UBERON:0000055,1.15e-10,68;UBERON:0002066,3.32e-09,5;UBERON:0002049,6.41e-09,78;UBERON:0007798,6.41e-09,78;UBERON:0001638,1.33e-08,9;UBERON:0003920,1.33e-08,9;UBERON:0004582,1.33e-08,9;UBERON:0002294,1.56e-08,9;UBERON:0001173,1.56e-08,9;UBERON:0004912,1.56e-08,9;UBERON:0010523,8.55e-08,3;UBERON:0001915,8.55e-08,3;UBERON:0001982,8.55e-08,3;UBERON:0007500,1.10e-07,59;UBERON:0001981,1.10e-07,59;UBERON:0004537,1.10e-07,59;UBERON:0006965,1.10e-07,59;UBERON:0002394,1.60e-07,6;UBERON:0003928,1.60e-07,6;UBERON:0004177,9.48e-07,7;UBERON:0005057,9.48e-07,7 | |||
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| ||
|short_description=p1@uc001pkv.1 | |short_description=p1@uc001pkv.1 | ||
}} | }} |
Latest revision as of 18:01, 23 July 2015
Short description: | p1@uc001pkv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001pkv.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001pkv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.30e-36 | 24 |
blood vessel endothelial cell | 3.39e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.39e-30 | 18 |
endothelial cell | 7.28e-23 | 36 |
meso-epithelial cell | 1.14e-17 | 45 |
endothelial cell of umbilical vein | 4.98e-15 | 3 |
endothelial cell of artery | 4.09e-13 | 9 |
lining cell | 5.07e-13 | 58 |
barrier cell | 5.07e-13 | 58 |
vein endothelial cell | 7.29e-13 | 6 |
lymphocyte | 4.30e-12 | 53 |
common lymphoid progenitor | 4.30e-12 | 53 |
lymphocyte of B lineage | 2.00e-11 | 24 |
pro-B cell | 2.00e-11 | 24 |
lymphoid lineage restricted progenitor cell | 1.68e-10 | 52 |
squamous epithelial cell | 1.78e-08 | 63 |
capillary endothelial cell | 8.55e-08 | 3 |
aortic endothelial cell | 9.04e-08 | 6 |
lymphangioblast | 1.72e-07 | 6 |
endothelial cell of lymphatic vessel | 1.72e-07 | 6 |
vascular lymphangioblast | 1.72e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.39e-30 | 18 |
endothelium | 3.39e-30 | 18 |
cardiovascular system endothelium | 3.39e-30 | 18 |
simple squamous epithelium | 2.69e-24 | 22 |
squamous epithelium | 4.12e-21 | 25 |
endothelial tube | 4.09e-13 | 9 |
arterial system endothelium | 4.09e-13 | 9 |
endothelium of artery | 4.09e-13 | 9 |
vessel | 1.15e-10 | 68 |
umbilical vein | 3.32e-09 | 5 |
vasculature | 6.41e-09 | 78 |
vascular system | 6.41e-09 | 78 |
vein | 1.33e-08 | 9 |
venous blood vessel | 1.33e-08 | 9 |
venous system | 1.33e-08 | 9 |
biliary system | 1.56e-08 | 9 |
biliary tree | 1.56e-08 | 9 |
biliary bud | 1.56e-08 | 9 |
microcirculatory vessel | 8.55e-08 | 3 |
endothelium of capillary | 8.55e-08 | 3 |
capillary | 8.55e-08 | 3 |
epithelial tube open at both ends | 1.10e-07 | 59 |
blood vessel | 1.10e-07 | 59 |
blood vasculature | 1.10e-07 | 59 |
vascular cord | 1.10e-07 | 59 |
bile duct | 1.60e-07 | 6 |
digestive system duct | 1.60e-07 | 6 |
hemopoietic organ | 9.48e-07 | 7 |
immune organ | 9.48e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.15e-11 | 10 |