FFCP PHASE1:Hg19::chr11:125757404..125757420,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:125757404..125757420,- | |||
|description=CAGE_peak_at_chr11:125757404..125757420,- | |description=CAGE_peak_at_chr11:125757404..125757420,- | ||
|id=chr11:125757404..125757420,- | |id=chr11:125757404..125757420,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.86e-29;3!UBERON:0000358;2.93e-11;1 | |ontology_enrichment_development_v019=UBERON:0006215;6.86e-29;3!UBERON:0000358;2.93e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;8.20e-11;1!DOID:10165;8.20e-11;1!DOID:1798;8.20e-11;1 | |ontology_enrichment_disease_v019=DOID:1799;8.20e-11;1!DOID:10165;8.20e-11;1!DOID:1798;8.20e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,1.77e-10,1;DOID:10165,1.77e-10,1;DOID:1798,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.59e-23!57;UBERON:0005068!1.59e-23!57;UBERON:0006241!1.59e-23!57;UBERON:0007135!1.59e-23!57;UBERON:0002616!3.30e-18!59;UBERON:0002780!7.16e-18!41;UBERON:0001890!7.16e-18!41;UBERON:0006240!7.16e-18!41;UBERON:0003080!3.65e-17!42;UBERON:0007023!7.61e-17!115;UBERON:0003075!1.95e-15!86;UBERON:0007284!1.95e-15!86;UBERON:0000955!2.88e-15!69;UBERON:0006238!2.88e-15!69;UBERON:0002346!7.18e-15!90;UBERON:0005743!8.44e-15!86;UBERON:0001017!1.67e-14!82;UBERON:0002020!2.47e-14!34;UBERON:0003528!2.47e-14!34;UBERON:0001893!2.87e-14!34;UBERON:0002791!1.48e-13!33;UBERON:0001869!2.81e-13!32;UBERON:0000073!3.40e-13!94;UBERON:0001016!3.40e-13!94;UBERON:0002619!1.86e-11!22;UBERON:0003056!1.25e-10!61;UBERON:0001950!4.49e-10!20;UBERON:0000956!2.22e-09!25;UBERON:0000203!2.22e-09!25;UBERON:0000153!7.81e-08!129;UBERON:0007811!7.81e-08!129;UBERON:0000033!1.18e-07!123;UBERON:0003076!1.39e-07!15;UBERON:0003057!1.39e-07!15;UBERON:0002308!9.72e-07!9;UBERON:0000125!9.72e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.59e-23!57;UBERON:0005068!1.59e-23!57;UBERON:0006241!1.59e-23!57;UBERON:0007135!1.59e-23!57;UBERON:0002616!3.30e-18!59;UBERON:0002780!7.16e-18!41;UBERON:0001890!7.16e-18!41;UBERON:0006240!7.16e-18!41;UBERON:0003080!3.65e-17!42;UBERON:0007023!7.61e-17!115;UBERON:0003075!1.95e-15!86;UBERON:0007284!1.95e-15!86;UBERON:0000955!2.88e-15!69;UBERON:0006238!2.88e-15!69;UBERON:0002346!7.18e-15!90;UBERON:0005743!8.44e-15!86;UBERON:0001017!1.67e-14!82;UBERON:0002020!2.47e-14!34;UBERON:0003528!2.47e-14!34;UBERON:0001893!2.87e-14!34;UBERON:0002791!1.48e-13!33;UBERON:0001869!2.81e-13!32;UBERON:0000073!3.40e-13!94;UBERON:0001016!3.40e-13!94;UBERON:0002619!1.86e-11!22;UBERON:0003056!1.25e-10!61;UBERON:0001950!4.49e-10!20;UBERON:0000956!2.22e-09!25;UBERON:0000203!2.22e-09!25;UBERON:0000153!7.81e-08!129;UBERON:0007811!7.81e-08!129;UBERON:0000033!1.18e-07!123;UBERON:0003076!1.39e-07!15;UBERON:0003057!1.39e-07!15;UBERON:0002308!9.72e-07!9;UBERON:0000125!9.72e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.91e-15;6!UBERON:0001874;8.20e-11;1!UBERON:0002680;4.88e-10;9!UBERON:0001895;4.88e-10;9!UBERON:0000955;3.60e-08;68!UBERON:0004733;1.18e-07;12!UBERON:0002028;1.18e-07;12!UBERON:0000922;2.24e-07;49!UBERON:0004732;4.23e-07;13!UBERON:0002791;7.29e-07;32!UBERON:0000073;9.92e-07;53!UBERON:0002616;9.92e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002037;8.91e-15;6!UBERON:0001874;8.20e-11;1!UBERON:0002680;4.88e-10;9!UBERON:0001895;4.88e-10;9!UBERON:0000955;3.60e-08;68!UBERON:0004733;1.18e-07;12!UBERON:0002028;1.18e-07;12!UBERON:0000922;2.24e-07;49!UBERON:0004732;4.23e-07;13!UBERON:0002791;7.29e-07;32!UBERON:0000073;9.92e-07;53!UBERON:0002616;9.92e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.13e-15,6;UBERON:0006215,8.13e-15,6;UBERON:0001874,1.46e-10,1;UBERON:0000073,2.48e-10,53;UBERON:0002616,2.48e-10,53;UBERON:0002680,4.60e-10,9;UBERON:0001895,4.60e-10,9;UBERON:0010092,4.60e-10,9;UBERON:0000955,7.92e-10,68;UBERON:0006238,7.92e-10,68;UBERON:0001049,9.77e-10,56;UBERON:0005068,9.77e-10,56;UBERON:0006241,9.77e-10,56;UBERON:0007135,9.77e-10,56;UBERON:0001017,4.29e-08,81;UBERON:0004733,1.13e-07,12;UBERON:0002028,1.13e-07,12;UBERON:0007277,1.13e-07,12;UBERON:0001016,3.52e-07,89;UBERON:0002791,3.78e-07,32;UBERON:0001869,3.78e-07,32;UBERON:0004732,4.06e-07,13;UBERON:0003528,9.92e-07,34;UBERON:0002020,9.92e-07,34;UBERON:0001893,9.92e-07,34 | |||
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| ||
|short_description=p@chr11:125757404..125757420,- | |short_description=p@chr11:125757404..125757420,- | ||
}} | }} |
Latest revision as of 19:42, 23 July 2015
Short description: | p@chr11:125757404..125757420, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:125757404..125757420, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.13e-15 | 6 |
rhombic lip | 8.13e-15 | 6 |
putamen | 1.46e-10 | 1 |
regional part of nervous system | 2.48e-10 | 53 |
regional part of brain | 2.48e-10 | 53 |
regional part of metencephalon | 4.60e-10 | 9 |
metencephalon | 4.60e-10 | 9 |
future metencephalon | 4.60e-10 | 9 |
brain | 7.92e-10 | 68 |
future brain | 7.92e-10 | 68 |
neural tube | 9.77e-10 | 56 |
neural rod | 9.77e-10 | 56 |
future spinal cord | 9.77e-10 | 56 |
neural keel | 9.77e-10 | 56 |
central nervous system | 4.29e-08 | 81 |
segmental subdivision of hindbrain | 1.13e-07 | 12 |
hindbrain | 1.13e-07 | 12 |
presumptive hindbrain | 1.13e-07 | 12 |
nervous system | 3.52e-07 | 89 |
regional part of telencephalon | 3.78e-07 | 32 |
cerebral hemisphere | 3.78e-07 | 32 |
segmental subdivision of nervous system | 4.06e-07 | 13 |
brain grey matter | 9.92e-07 | 34 |
gray matter | 9.92e-07 | 34 |
telencephalon | 9.92e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.77e-10 | 1 |
endocrine pancreas cancer | 1.77e-10 | 1 |
pancreatic endocrine carcinoma | 1.77e-10 | 1 |