FFCP PHASE1:Hg19::chr11:1774653..1774680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1774653..1774680,- | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_at_chr11:1774653..1774680,- | |description=CAGE_peak_at_chr11:1774653..1774680,- | ||
|id=chr11:1774653..1774680,- | |id=chr11:1774653..1774680,- | ||
|ontology_enrichment_celltype=CL:0000766!1.33e-10!76;CL:0000839!1.38e-10!70;CL:0002194!4.68e-10!63;CL:0000576!4.68e-10!63;CL:0000040!4.68e-10!63;CL:0000559!4.68e-10!63;CL:0000557!6.92e-10!71;CL:0002009!3.78e-09!65;CL:0002057!3.31e-07!42 | |ontology_enrichment_celltype=CL:0000766!1.33e-10!76;CL:0000839!1.38e-10!70;CL:0002194!4.68e-10!63;CL:0000576!4.68e-10!63;CL:0000040!4.68e-10!63;CL:0000559!4.68e-10!63;CL:0000557!6.92e-10!71;CL:0002009!3.78e-09!65;CL:0002057!3.31e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.95e-11;39!CL:0000234;2.95e-11;39!CL:0000860;2.67e-09;33!CL:0002057;2.67e-09;33!CL:0000235;7.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.05e-13,66;CL:0000766,1.28e-13,72;CL:0000557,2.98e-13,67;CL:0002194,1.67e-12,59;CL:0000576,1.67e-12,59;CL:0000040,1.67e-12,59;CL:0000559,1.67e-12,59;CL:0000473,7.74e-12,48;CL:0000234,7.74e-12,48;CL:0002009,1.29e-11,61;CL:0000860,4.91e-08,42;CL:0002057,4.91e-08,42;CL:0000235,7.87e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.85e-10!115;UBERON:0002371!6.02e-10!80;UBERON:0001474!1.10e-08!86;UBERON:0002193!8.35e-08!112;UBERON:0004765!1.15e-07!101;UBERON:0001434!1.15e-07!101;UBERON:0000468!1.88e-07!659;UBERON:0002204!1.94e-07!167;UBERON:0002390!2.40e-07!102;UBERON:0003061!2.40e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.88e-13,76;UBERON:0001474,4.80e-12,82;UBERON:0004765,3.28e-11,90;UBERON:0002405,3.66e-11,93;UBERON:0001434,1.08e-10,100;UBERON:0002390,1.16e-09,98;UBERON:0003061,1.16e-09,98;UBERON:0002193,2.40e-09,108;UBERON:0000926,2.47e-09,315;UBERON:0004120,2.47e-09,315;UBERON:0006603,2.47e-09,315;UBERON:0002204,5.49e-08,167 | |||
|phase1_expression=3.08853244759946,8.13581990785736,4.65149533516705,4.00293193412522,12.0679495495368,2.61701557230111,12.6649939084155,3.79031924056099,1.82829939739887,0,1.39560233594486,0.218441372130172,0,0.618831764800233,1.65698687863958,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,0.123121058076788,1.83600622119828,0.626909442956176,0,0.273748850145768,0.502170558379211,0,0,0,0.786728553697808,0,0.928896739896456,0,0.90361775633475,1.47901604066715,0,0,0,0,2.20598892217156,0.651032612147555,18.5849843619137,18.1380452970629,8.24241816429397,10.6140714309082,3.02300754951048,3.15359279544161,6.50801303335917,2.87817521615278,1.54853185447552,2.8769239232215,1.7931249457037,1.18241114944293,3.44745680736619,0.645484683583826,0,8.47090527941721,3.82068610080984,2.47195832889593,6.73384563215986,2.88836124368484,3.83602275479425,4.28806690242731,2.79249120670285,2.55734850319616,4.06292934080018,0.56738522469114,3.11411124497787,5.02497330513487,0,1.52032191293582,4.23779651843358,1.10483290796269,0.316462387440884,1.26753171787165,1.70083439972035,0.209658645508376,1.34794357375794,1.50176892841506,0.64290234678832,0.570025487482497,0.79566670879636,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0.411202997999018,0.501559486172034,0,0.473447805734733,0,0.557052284425868,0.589211814949674,0,0.270803863765016,0.128091319725675,0.780356085359269,0.328875809207352,0.829050053357545,0.579606171470105,0,0,0,0.339928028092699,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.602300476311091,0.127986611154418,1.24930726552346,0,0.821127996921047,0,1.33720097891754,0,0,0.670700859703636,0.383587685530591,3.2529523714611,0.50133791063589,5.06962816362883,4.7717156823066,3.40644409211845,0.189069634328136,1.10864698731282,0.790513071238134,1.44076983047484,0.364295288292542,0.370784442784429,2.59637914923747,4.70150290708022,10.1048049994338,0.476981248610684,0,0,0.79504962946682,0,0,0.56530794192401,3.35599548967925,0.275118041940067,0.417989933073621,0.775250277507987,0.35576626268671,0.66944122552934,0.805658634218294,0,1.22031028774085,0.367663080345869,1.62028389576352,0.625098097988558,0,0,0,0,0.549605231791222,0,0,2.18047026071267,2.48485975847659,1.51956613997496,0.529636723252875,8.60509862246441,0.709336764396714,1.68203280042692,0,4.68668341992604,0,0.67355336034844,0.490385709340376,0.302714855289863,1.15235184896,0.234321431833797,2.49728061464256,0,1.49448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.826606249406124,4.75201142912821,4.45080472701402,0,2.15585442544872,0.336672227908132,0.250237039743928,0,0.438977620880838,1.22595118319608,1.65261864797256,0.680593098960126,0.538168907066586,0.85422955527427,0.211931901159562,0.600182192168805,0.515262646192195,1.28820270022815,0.744467425326359,0.506328996723799,0.876933046450788,1.00973509697646,0.460249493211497,1.61646056818812,2.4850671476163,0.403008392910561,0.339121184620975,0.773043412653187,0.545492241181669,0.286804595389004,0.975789649036763,0.265059536642971,1.39432731443422,0.207322110030741,1.26160425437814,1.82488679537915,1.56449532329816,1.92972281457866,0,0.928735856063958,4.33127689001751,1.0647612003586,0.842923450390509,0.964044119533928,0.882351781859152,1.08939722046203,0.237270619111097,0.539325232640658,0.588664395376038,0.38474715694639,16.2394200017423,5.60967095213783,0,0,5.07020139287323,5.89696330006576,1.77236972004421,0.441463099414651,1.8448265781467,0.857839051492628,2.52425656439839,1.1240175325762,0.301586917234893,0.277765335475589,0,1.03993478527958,0,0,0.117408694235822,0.866198686566443,3.70388410061289,1.71228737011138,3.1608175918371,8.58486162094873,12.5570673104573,5.14809383306323,8.76923857503497,0,0.839910640994298,0.425325291727159,0,0,0.766765358330422,0,17.2574930665923,14.7202962033948,12.3943159938587,15.275334444592,0.380987365753014,8.40374536228211,10.5495702489042,6.84289784090821,5.14137463516618,0.600686115687835,2.5724378936752,0,1.30788020649984,0.07333828582095,1.42198887333556,0,0,2.12750493267896,2.08014873822732,0,1.41849132023278,0.799266537048298,0.428933980974443,1.08524321078289,0,0.325736184293735,0,0,3.31583314765545,1.74306691720059,2.69927076191554,34.0546585795333,38.6737960402737,56.9251636604185,0.958499421966331,1.14861935834114,0,1.15825045334063,2.67119219315498,0.179060963239896,0.224170287987055,0.788123040807709,0.431255149719035,0.77005821767849,1.27047312111232,0,0,0.502548796003046,0.637938751653163,1.49801404789436,17.9496875522415,2.07207756718018,1.34960640891054,3.00102312635806,0.813795071099207,0.831883446123229,0.356857977594324,1.10391690523754,0.234282829985426,1.80567659836631,29.562975527278,7.24311499047534,0,0.184369168541703,1.12948698808508,3.72022199179207,3.77457766191941,0.206768026122887,1.2942852049117,0.426910231213777,0.909382714338778,0,0,4.71404834855676,0.767309866440312,4.77122160536225,7.04765320906355,2.0468289962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| ||
|short_description=p@chr11:1774653..1774680,- | |short_description=p@chr11:1774653..1774680,- | ||
}} | }} |
Latest revision as of 20:30, 23 July 2015
Short description: | p@chr11:1774653..1774680, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1774653..1774680, - |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.05e-13 | 66 |
myeloid leukocyte | 1.28e-13 | 72 |
granulocyte monocyte progenitor cell | 2.98e-13 | 67 |
monopoietic cell | 1.67e-12 | 59 |
monocyte | 1.67e-12 | 59 |
monoblast | 1.67e-12 | 59 |
promonocyte | 1.67e-12 | 59 |
defensive cell | 7.74e-12 | 48 |
phagocyte | 7.74e-12 | 48 |
macrophage dendritic cell progenitor | 1.29e-11 | 61 |
classical monocyte | 4.91e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.91e-08 | 42 |
macrophage | 7.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.88e-13 | 76 |
bone element | 4.80e-12 | 82 |
skeletal element | 3.28e-11 | 90 |
immune system | 3.66e-11 | 93 |
skeletal system | 1.08e-10 | 100 |
hematopoietic system | 1.16e-09 | 98 |
blood island | 1.16e-09 | 98 |
hemolymphoid system | 2.40e-09 | 108 |
mesoderm | 2.47e-09 | 315 |
mesoderm-derived structure | 2.47e-09 | 315 |
presumptive mesoderm | 2.47e-09 | 315 |
musculoskeletal system | 5.49e-08 | 167 |