FFCP PHASE1:Hg19::chr11:19619705..19619737,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:19619705..19619737,+
|short_description=p@chr11:19619705..19619737,+
|description=CAGE_peak_at_chr11:19619705..19619737,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:19619705..19619737,+ | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_at_chr11:19619705..19619737,+ | |||
|id=chr11:19619705..19619737,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.21e-13!9;CL:0000222!3.04e-09!119;CL:0000515!8.99e-08!4;CL:0000680!4.63e-07!57;CL:0000056!4.63e-07!57;CL:0000355!4.63e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000056;8.74e-25;4!CL:0000680;1.46e-21;7!CL:0000515;3.97e-19;3!CL:0000188;3.97e-16;9!CL:0002600;4.05e-12;2!CL:0002367;4.05e-12;2!CL:0002321;5.16e-10;15!CL:0000222;1.86e-07;1!CL:0000228;2.16e-07;1!CL:0002372;2.16e-07;1!CL:0002174;2.51e-07;1!CL:0000501;2.51e-07;1!CL:0002599;3.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.51e-25,4;CL:0000188,4.73e-16,9;CL:0002600,3.84e-12,2;CL:0002367,3.84e-12,2;CL:0000680,4.13e-12,58;CL:0000056,4.13e-12,58;CL:0000355,4.13e-12,58;CL:0000222,2.78e-10,121;CL:0000228,2.10e-07,1;CL:0002372,2.10e-07,1;CL:0002174,2.67e-07,1;CL:0000501,2.67e-07,1;CL:0002599,2.84e-07,1;CL:0000187,5.53e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000515;8.74e-25;4!CL:0000355;1.14e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;1.14e-22;16!UBERON:0002036;1.14e-22;16!UBERON:0001875;7.53e-13;2!UBERON:0006514;7.53e-13;2!UBERON:0005969;4.05e-12;2!UBERON:0003956;4.05e-12;2!UBERON:0002385;9.94e-11;31!UBERON:0001015;9.94e-11;31!UBERON:0000383;9.94e-11;31!UBERON:0000125;1.56e-10;9!UBERON:0002308;1.56e-10;9!UBERON:0000019;3.46e-10;19!UBERON:0000047;3.46e-10;19!UBERON:0004088;3.46e-10;19!UBERON:0010230;3.46e-10;19!UBERON:0000970;1.19e-09;20!UBERON:0002104;3.64e-09;21!UBERON:0001456;3.64e-09;21!UBERON:0000020;2.55e-08;23!UBERON:0009663;5.24e-08;7!UBERON:0001032;5.96e-08;24!UBERON:0004456;5.96e-08;24!UBERON:0002038;6.87e-07;1!UBERON:0009661;6.87e-07;1!UBERON:0002950;6.87e-07;1!UBERON:0001891;6.87e-07;1 | |||
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| ||
|short_description=p@chr11:19619705..19619737,+ | |||
}} | }} |
Latest revision as of 20:50, 23 July 2015
Short description: | p@chr11:19619705..19619737, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19619705..19619737, + |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.51e-25 | 4 |
cell of skeletal muscle | 4.73e-16 | 9 |
smooth muscle cell of trachea | 3.84e-12 | 2 |
trabecular meshwork cell | 3.84e-12 | 2 |
muscle precursor cell | 4.13e-12 | 58 |
myoblast | 4.13e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.13e-12 | 58 |
mesodermal cell | 2.78e-10 | 121 |
multinucleate cell | 2.10e-07 | 1 |
myotube | 2.10e-07 | 1 |
follicular cell of ovary | 2.67e-07 | 1 |
granulosa cell | 2.67e-07 | 1 |
smooth muscle cell of the esophagus | 2.84e-07 | 1 |
muscle cell | 5.53e-07 | 55 |