FFCP PHASE1:Hg19::chr11:28779555..28779601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:28779555..28779601,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr11:28779555..28779601,+ | |description=CAGE_peak_at_chr11:28779555..28779601,+ | ||
|id=chr11:28779555..28779601,+ | |id=chr11:28779555..28779601,+ | ||
|ontology_enrichment_celltype=CL:0000359!7.85e-16!32;CL:0000077!9.26e-16!19;CL:0000222!2.25e-15!119;CL:0002594!6.62e-14!4;CL:0000192!2.51e-11!42;CL:0000514!2.51e-11!42;CL:0000680!3.59e-10!57;CL:0000056!3.59e-10!57;CL:0000355!3.59e-10!57;CL:0000187!1.76e-09!54;CL:0002539!4.21e-09!10;CL:1000306!5.53e-09!4;CL:0002547!5.53e-09!4;CL:0000055!1.32e-08!180;CL:0000183!2.08e-08!59;CL:0000393!3.24e-08!60;CL:0000211!3.24e-08!60;CL:0002195!1.35e-07!2;CL:0002571!1.35e-07!2;CL:0000076!2.87e-07!62;CL:0000213!4.30e-07!57;CL:0000215!4.30e-07!57 | |ontology_enrichment_celltype=CL:0000359!7.85e-16!32;CL:0000077!9.26e-16!19;CL:0000222!2.25e-15!119;CL:0002594!6.62e-14!4;CL:0000192!2.51e-11!42;CL:0000514!2.51e-11!42;CL:0000680!3.59e-10!57;CL:0000056!3.59e-10!57;CL:0000355!3.59e-10!57;CL:0000187!1.76e-09!54;CL:0002539!4.21e-09!10;CL:1000306!5.53e-09!4;CL:0002547!5.53e-09!4;CL:0000055!1.32e-08!180;CL:0000183!2.08e-08!59;CL:0000393!3.24e-08!60;CL:0000211!3.24e-08!60;CL:0002195!1.35e-07!2;CL:0002571!1.35e-07!2;CL:0000076!2.87e-07!62;CL:0000213!4.30e-07!57;CL:0000215!4.30e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.01e-40;4!CL:0002547;2.01e-40;4!CL:0002539;8.13e-17;10!CL:0002548;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.81e-40,4;CL:0002547,1.81e-40,4;CL:0002539,8.13e-17,10;CL:0002548,6.78e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.72e-10!5;DOID:450!1.72e-10!5;DOID:66!1.72e-10!5;DOID:423!1.72e-10!5;DOID:0080000!1.72e-10!5;DOID:11722!1.72e-10!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.17e-20!42;UBERON:0003509!3.17e-20!42;UBERON:0004572!3.17e-20!42;UBERON:0002049!2.76e-14!79;UBERON:0007798!2.76e-14!79;UBERON:0001310!6.62e-14!4;UBERON:0004573!4.36e-13!33;UBERON:0004571!4.36e-13!33;UBERON:0001981!7.41e-13!60;UBERON:0007500!7.41e-13!60;UBERON:0004537!7.41e-13!60;UBERON:0006965!7.41e-13!60;UBERON:0000947!1.85e-12!21;UBERON:0010191!1.85e-12!21;UBERON:0004535!3.49e-12!110;UBERON:0000055!3.76e-12!69;UBERON:0001009!1.06e-11!113;UBERON:0004872!1.10e-11!84;UBERON:0001134!2.82e-09!61;UBERON:0002036!2.82e-09!61;UBERON:0003082!2.82e-09!61;UBERON:0004237!4.21e-09!10;UBERON:0004695!4.21e-09!10;UBERON:0002111!4.21e-09!10;UBERON:0004178!4.21e-09!10;UBERON:0000415!5.53e-09!4;UBERON:0007240!5.53e-09!4;UBERON:0005742!5.53e-09!4;UBERON:0005734!5.53e-09!4;UBERON:0004664!5.53e-09!4;UBERON:0004663!5.53e-09!4;UBERON:0002385!7.14e-09!63;UBERON:0001015!7.14e-09!63;UBERON:0000383!7.14e-09!63;UBERON:0003914!8.98e-09!118;UBERON:0000486!4.96e-08!82;UBERON:0004290!1.20e-07!70;UBERON:0007625!1.58e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.01e-40;4!UBERON:0000415;2.01e-40;4!UBERON:0007240;2.01e-40;4!UBERON:0005742;2.01e-40;4!UBERON:0005734;2.01e-40;4!UBERON:0004664;2.01e-40;4!UBERON:0004663;2.01e-40;4!UBERON:0000947;1.08e-30;21!UBERON:0010191;1.08e-30;21!UBERON:0004237;8.13e-17;10!UBERON:0004695;8.13e-17;10!UBERON:0002111;8.13e-17;10!UBERON:0004178;8.13e-17;10!UBERON:0004573;1.11e-15;33!UBERON:0004571;1.11e-15;33!UBERON:0001637;2.05e-15;42!UBERON:0003509;2.05e-15;42!UBERON:0004572;2.05e-15;42!UBERON:0001135;1.42e-11;15!UBERON:0007500;1.80e-08;56!UBERON:0001981;1.80e-08;56!UBERON:0004537;1.80e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.81e-40,4;UBERON:0007240,1.81e-40,4;UBERON:0005742,1.81e-40,4;UBERON:0005734,1.81e-40,4;UBERON:0004664,1.81e-40,4;UBERON:0004663,1.81e-40,4;UBERON:0000947,1.04e-30,21;UBERON:0010191,1.04e-30,21;UBERON:0004797,1.14e-23,7;UBERON:0004573,7.42e-20,33;UBERON:0004571,7.42e-20,33;UBERON:0004237,8.13e-17,10;UBERON:0004695,8.13e-17,10;UBERON:0002111,8.13e-17,10;UBERON:0004178,8.13e-17,10;UBERON:0001637,9.03e-16,42;UBERON:0003509,9.03e-16,42;UBERON:0004572,9.03e-16,42;UBERON:0004872,1.45e-12,83;UBERON:0001135,1.42e-11,15;UBERON:0007500,1.96e-11,59;UBERON:0001981,1.96e-11,59;UBERON:0004537,1.96e-11,59;UBERON:0006965,1.96e-11,59;UBERON:0000055,5.22e-10,68;UBERON:0004535,1.03e-09,109;UBERON:0001009,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0002049,8.31e-09,78;UBERON:0007798,8.31e-09,78 | |||
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| ||
|short_description=p@chr11:28779555..28779601,+ | |short_description=p@chr11:28779555..28779601,+ | ||
}} | }} |
Latest revision as of 21:20, 23 July 2015
Short description: | p@chr11:28779555..28779601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:28779555..28779601, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.81e-40 | 4 |
fibroblast of the aortic adventitia | 1.81e-40 | 4 |
aortic smooth muscle cell | 8.13e-17 | 10 |
cardiac fibroblast | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.81e-40 | 4 |
tunica adventitia of artery | 1.81e-40 | 4 |
adventitia | 1.81e-40 | 4 |
tunica adventitia of blood vessel | 1.81e-40 | 4 |
aorta tunica adventitia | 1.81e-40 | 4 |
aorta wall | 1.81e-40 | 4 |
aorta | 1.04e-30 | 21 |
aortic system | 1.04e-30 | 21 |
blood vessel layer | 1.14e-23 | 7 |
systemic artery | 7.42e-20 | 33 |
systemic arterial system | 7.42e-20 | 33 |
blood vessel smooth muscle | 8.13e-17 | 10 |
arterial system smooth muscle | 8.13e-17 | 10 |
artery smooth muscle tissue | 8.13e-17 | 10 |
aorta smooth muscle tissue | 8.13e-17 | 10 |
artery | 9.03e-16 | 42 |
arterial blood vessel | 9.03e-16 | 42 |
arterial system | 9.03e-16 | 42 |
splanchnic layer of lateral plate mesoderm | 1.45e-12 | 83 |
smooth muscle tissue | 1.42e-11 | 15 |
epithelial tube open at both ends | 1.96e-11 | 59 |
blood vessel | 1.96e-11 | 59 |
blood vasculature | 1.96e-11 | 59 |
vascular cord | 1.96e-11 | 59 |
vessel | 5.22e-10 | 68 |
cardiovascular system | 1.03e-09 | 109 |
circulatory system | 1.80e-09 | 112 |
epithelial tube | 4.32e-09 | 117 |
vasculature | 8.31e-09 | 78 |
vascular system | 8.31e-09 | 78 |