FFCP PHASE1:Hg19::chr11:33912780..33912786,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:33912780..33912786,- | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_at_chr11:33912780..33912786,- | |||
|id=chr11:33912780..33912786,- | |||
|ontology_enrichment_celltype=CL:0000047!3.67e-09!8;CL:0002319!5.47e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.99e-131;2!CL:0002319;6.56e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.68e-34,8;CL:0002319,6.56e-11,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.74e-09!31;DOID:74!5.34e-09!2;DOID:1240!3.25e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.17e-29!82;UBERON:0005743!5.19e-28!86;UBERON:0000073!8.37e-25!94;UBERON:0001016!8.37e-25!94;UBERON:0001049!1.04e-23!57;UBERON:0005068!1.04e-23!57;UBERON:0006241!1.04e-23!57;UBERON:0007135!1.04e-23!57;UBERON:0000955!8.46e-23!69;UBERON:0006238!8.46e-23!69;UBERON:0002616!9.30e-23!59;UBERON:0002298!2.64e-18!8;UBERON:0003075!1.59e-17!86;UBERON:0007284!1.59e-17!86;UBERON:0002346!1.59e-16!90;UBERON:0004733!2.96e-16!12;UBERON:0002028!2.96e-16!12;UBERON:0007277!2.96e-16!12;UBERON:0004732!6.26e-15!13;UBERON:0002020!2.23e-14!34;UBERON:0003528!2.23e-14!34;UBERON:0002780!9.52e-14!41;UBERON:0001890!9.52e-14!41;UBERON:0006240!9.52e-14!41;UBERON:0000153!1.48e-13!129;UBERON:0007811!1.48e-13!129;UBERON:0001896!1.96e-13!3;UBERON:0005290!1.96e-13!3;UBERON:0010096!1.96e-13!3;UBERON:0003080!2.31e-13!42;UBERON:0000988!6.30e-13!3;UBERON:0003076!8.28e-13!15;UBERON:0003057!8.28e-13!15;UBERON:0002791!1.87e-12!33;UBERON:0004121!2.90e-12!169;UBERON:0001893!4.91e-12!34;UBERON:0000033!6.93e-12!123;UBERON:0007023!7.24e-12!115;UBERON:0000924!7.72e-12!173;UBERON:0006601!7.72e-12!173;UBERON:0001869!1.69e-10!32;UBERON:0003056!7.44e-10!61;UBERON:0002148!1.66e-09!2;UBERON:0009662!1.66e-09!2;UBERON:0000956!7.67e-09!25;UBERON:0000203!7.67e-09!25;UBERON:0001950!1.44e-08!20;UBERON:0001871!2.56e-08!7;UBERON:0002619!9.64e-08!22;UBERON:0002308!1.40e-07!9;UBERON:0000125!1.40e-07!9;UBERON:0002680!1.53e-07!9;UBERON:0001895!1.53e-07!9;UBERON:0010092!1.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.27e-23;3!UBERON:0005290;3.27e-23;3!UBERON:0002298;2.45e-12;6!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.27e-23,3;UBERON:0005290,3.27e-23,3;UBERON:0010096,3.27e-23,3;UBERON:0002298,2.45e-12,6;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
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| ||
|short_description=p@chr11:33912780..33912786,- | |||
}} | }} |
Latest revision as of 21:41, 23 July 2015
Short description: | p@chr11:33912780..33912786, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:33912780..33912786, - |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.68e-34 | 8 |
neural cell | 6.56e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.27e-23 | 3 |
myelencephalon | 3.27e-23 | 3 |
future myelencephalon | 3.27e-23 | 3 |
brainstem | 2.45e-12 | 6 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
segmental subdivision of hindbrain | 7.92e-07 | 12 |
hindbrain | 7.92e-07 | 12 |
presumptive hindbrain | 7.92e-07 | 12 |