FFCP PHASE1:Hg19::chr11:40121076..40121109,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:40121076..40121109,- | |||
|description=CAGE_peak_at_chr11:40121076..40121109,- | |description=CAGE_peak_at_chr11:40121076..40121109,- | ||
|id=chr11:40121076..40121109,- | |id=chr11:40121076..40121109,- | ||
|ontology_enrichment_celltype=CL:0000037!4.12e-25!172;CL:0000566!4.12e-25!172;CL:0000988!4.49e-23!182;CL:0002032!3.64e-21!165;CL:0000837!3.64e-21!165;CL:0002087!6.84e-20!119;CL:0000763!9.50e-18!112;CL:0000049!9.50e-18!112;CL:0002057!2.53e-17!42;CL:0000738!1.01e-16!140;CL:0000860!7.43e-16!45;CL:0002393!3.21e-15!9;CL:0002397!3.21e-15!9;CL:0002194!2.83e-14!63;CL:0000576!2.83e-14!63;CL:0000040!2.83e-14!63;CL:0000559!2.83e-14!63;CL:0002031!1.06e-13!124;CL:0002009!1.12e-13!65;CL:0000557!1.43e-13!71;CL:0000839!2.46e-12!70;CL:0000766!3.24e-12!76;CL:0000875!1.14e-09!3;CL:0002396!1.14e-09!3;CL:0000842!5.57e-09!3;CL:0000224!7.93e-07!4;CL:0000785!9.28e-07!2;CL:0000955!9.28e-07!2;CL:0000818!9.28e-07!2;CL:0000954!9.28e-07!2;CL:0000816!9.28e-07!2 | |ontology_enrichment_celltype=CL:0000037!4.12e-25!172;CL:0000566!4.12e-25!172;CL:0000988!4.49e-23!182;CL:0002032!3.64e-21!165;CL:0000837!3.64e-21!165;CL:0002087!6.84e-20!119;CL:0000763!9.50e-18!112;CL:0000049!9.50e-18!112;CL:0002057!2.53e-17!42;CL:0000738!1.01e-16!140;CL:0000860!7.43e-16!45;CL:0002393!3.21e-15!9;CL:0002397!3.21e-15!9;CL:0002194!2.83e-14!63;CL:0000576!2.83e-14!63;CL:0000040!2.83e-14!63;CL:0000559!2.83e-14!63;CL:0002031!1.06e-13!124;CL:0002009!1.12e-13!65;CL:0000557!1.43e-13!71;CL:0000839!2.46e-12!70;CL:0000766!3.24e-12!76;CL:0000875!1.14e-09!3;CL:0002396!1.14e-09!3;CL:0000842!5.57e-09!3;CL:0000224!7.93e-07!4;CL:0000785!9.28e-07!2;CL:0000955!9.28e-07!2;CL:0000818!9.28e-07!2;CL:0000954!9.28e-07!2;CL:0000816!9.28e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000875;4.49e-23;3!CL:0002396;4.49e-23;3!CL:0000946;2.50e-09;1!CL:0000786;2.50e-09;1!CL:0002032;3.30e-09;1!CL:0000037;3.30e-09;1!CL:0001024;3.30e-09;1!CL:0000557;3.30e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,9.28e-23,3;CL:0002396,9.28e-23,3;CL:0002393,1.07e-20,9;CL:0002397,1.07e-20,9;CL:0000037,1.13e-14,168;CL:0000988,9.53e-14,177;CL:0002032,1.01e-13,161;CL:0000837,1.01e-13,161;CL:0000763,3.22e-11,108;CL:0000049,3.22e-11,108;CL:0000946,2.60e-09,1;CL:0000786,2.60e-09,1;CL:0000980,2.60e-09,1;CL:0001024,3.58e-09,1;CL:0002087,8.36e-09,115;CL:0000557,1.07e-07,67;CL:0000738,4.20e-07,136;CL:0002194,5.27e-07,59;CL:0000576,5.27e-07,59;CL:0000040,5.27e-07,59;CL:0000559,5.27e-07,59;CL:0002031,5.67e-07,120;CL:0002009,9.59e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.42e-14!51;DOID:0060083!2.42e-14!51;DOID:8692!2.65e-11!31;DOID:1240!4.53e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.19e-14;31!DOID:1240;5.96e-12;39!DOID:2531;2.41e-11;51!DOID:0060083;2.41e-11;51!DOID:4960;1.88e-09;1!DOID:0070004;1.88e-09;1!DOID:12603;2.13e-09;1!DOID:2355;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.37e-20,51;DOID:0060083,6.37e-20,51;DOID:8692,5.64e-15,31;DOID:1240,7.88e-15,39;DOID:4960,1.89e-09,1;DOID:0070004,1.89e-09,1;DOID:12603,2.22e-09,1;DOID:2355,6.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.05e-20!102;UBERON:0003061!5.05e-20!102;UBERON:0002193!8.40e-19!112;UBERON:0002371!2.88e-14!80;UBERON:0001474!7.50e-13!86;UBERON:0002405!5.67e-12!115;UBERON:0004765!4.55e-10!101;UBERON:0001434!4.55e-10!101;UBERON:0002106!6.58e-09!3;UBERON:0004854!6.58e-09!3;UBERON:0009034!6.58e-09!3;UBERON:0002095!6.58e-09!3;UBERON:0004782!6.58e-09!3;UBERON:0003281!6.58e-09!3;UBERON:0009664!6.58e-09!3;UBERON:0002296!6.58e-09!3;UBERON:0005602!6.58e-09!3;UBERON:0001179!6.58e-09!3;UBERON:0006293!6.58e-09!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.88e-10,76;UBERON:0002405,1.21e-09,93;UBERON:0001474,2.85e-09,82;UBERON:0002390,4.72e-09,98;UBERON:0003061,4.72e-09,98;UBERON:0004765,2.70e-08,90;UBERON:0002193,4.95e-08,108;UBERON:0001434,2.71e-07,100 | |||
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| ||
|short_description=p@chr11:40121076..40121109,- | |short_description=p@chr11:40121076..40121109,- | ||
}} | }} |
Latest revision as of 22:09, 23 July 2015
Short description: | p@chr11:40121076..40121109, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:40121076..40121109, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 9.28e-23 | 3 |
CD14-low, CD16-positive monocyte | 9.28e-23 | 3 |
intermediate monocyte | 1.07e-20 | 9 |
CD14-positive, CD16-positive monocyte | 1.07e-20 | 9 |
hematopoietic stem cell | 1.13e-14 | 168 |
hematopoietic cell | 9.53e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.01e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-13 | 161 |
myeloid cell | 3.22e-11 | 108 |
common myeloid progenitor | 3.22e-11 | 108 |
antibody secreting cell | 2.60e-09 | 1 |
plasma cell | 2.60e-09 | 1 |
plasmablast | 2.60e-09 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.58e-09 | 1 |
nongranular leukocyte | 8.36e-09 | 115 |
granulocyte monocyte progenitor cell | 1.07e-07 | 67 |
leukocyte | 4.20e-07 | 136 |
monopoietic cell | 5.27e-07 | 59 |
monocyte | 5.27e-07 | 59 |
monoblast | 5.27e-07 | 59 |
promonocyte | 5.27e-07 | 59 |
hematopoietic lineage restricted progenitor cell | 5.67e-07 | 120 |
macrophage dendritic cell progenitor | 9.59e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.88e-10 | 76 |
immune system | 1.21e-09 | 93 |
bone element | 2.85e-09 | 82 |
hematopoietic system | 4.72e-09 | 98 |
blood island | 4.72e-09 | 98 |
skeletal element | 2.70e-08 | 90 |
hemolymphoid system | 4.95e-08 | 108 |
skeletal system | 2.71e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.37e-20 | 51 |
immune system cancer | 6.37e-20 | 51 |
myeloid leukemia | 5.64e-15 | 31 |
leukemia | 7.88e-15 | 39 |
bone marrow cancer | 1.89e-09 | 1 |
myeloma | 1.89e-09 | 1 |
acute leukemia | 2.22e-09 | 1 |
anemia | 6.72e-09 | 1 |