FFCP PHASE1:Hg19::chr11:45564023..45564028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000525855,ENST00000527642,ENST00000533315_5end | |association_with_transcript=0bp_to_ENST00000525855,ENST00000527642,ENST00000533315_5end | ||
|cluster_id=chr11:45564023..45564028,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_ENST00000525855_5end,CAGE_peak_1_at_ENST00000527642_5end,CAGE_peak_1_at_ENST00000533315_5end | |description=CAGE_peak_1_at_ENST00000525855_5end,CAGE_peak_1_at_ENST00000527642_5end,CAGE_peak_1_at_ENST00000533315_5end | ||
Latest revision as of 22:18, 23 July 2015
| Short description: | p1@ENST00000525855, p1@ENST00000527642, p1@ENST00000533315 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ENST00000525855_5end, CAGE_peak_1_at_ENST00000527642_5end, CAGE_peak_1_at_ENST00000533315_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000525855, ENST00000527642, ENST00000533315_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ENST00000525855p1@ENST00000527642p1@ENST00000533315 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 5.62e-118 | 22 |
| cerebral cortex | 5.28e-104 | 25 |
| pallium | 5.28e-104 | 25 |
| neocortex | 7.49e-104 | 20 |
| cerebral hemisphere | 2.07e-99 | 32 |
| telencephalon | 1.55e-93 | 34 |
| regional part of telencephalon | 4.57e-90 | 32 |
| brain grey matter | 9.87e-85 | 34 |
| gray matter | 9.87e-85 | 34 |
| regional part of forebrain | 2.21e-77 | 41 |
Showing 1 to 10 of 70 entries
