FFCP PHASE1:Hg19::chr11:57003843..57003857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:57003843..57003857,- | |||
|coexpression_cluster_id=C3161 | |||
|description=CAGE_peak_at_chr11:57003843..57003857,- | |description=CAGE_peak_at_chr11:57003843..57003857,- | ||
|id=chr11:57003843..57003857,- | |id=chr11:57003843..57003857,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.98e-34;3!UBERON:0003057;5.98e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-36!115;UBERON:0001049!9.41e-29!57;UBERON:0005068!9.41e-29!57;UBERON:0006241!9.41e-29!57;UBERON:0007135!9.41e-29!57;UBERON:0003075!1.07e-26!86;UBERON:0007284!1.07e-26!86;UBERON:0002346!3.98e-25!90;UBERON:0001017!4.11e-24!82;UBERON:0005743!1.24e-22!86;UBERON:0002616!1.12e-20!59;UBERON:0000073!9.27e-20!94;UBERON:0001016!9.27e-20!94;UBERON:0002791!2.93e-19!33;UBERON:0002020!9.91e-19!34;UBERON:0003528!9.91e-19!34;UBERON:0001893!1.39e-18!34;UBERON:0002619!2.27e-17!22;UBERON:0002780!6.99e-17!41;UBERON:0001890!6.99e-17!41;UBERON:0006240!6.99e-17!41;UBERON:0000955!1.76e-16!69;UBERON:0006238!1.76e-16!69;UBERON:0003080!2.21e-16!42;UBERON:0001869!2.98e-15!32;UBERON:0000956!5.21e-15!25;UBERON:0000203!5.21e-15!25;UBERON:0003076!8.22e-15!15;UBERON:0003057!8.22e-15!15;UBERON:0001950!2.86e-13!20;UBERON:0003056!1.29e-12!61;UBERON:0004121!7.00e-12!169;UBERON:0000924!2.07e-11!173;UBERON:0006601!2.07e-11!173;UBERON:0000153!2.13e-11!129;UBERON:0007811!2.13e-11!129;UBERON:0002240!2.29e-10!3;UBERON:0001896!2.67e-10!3;UBERON:0005290!2.67e-10!3;UBERON:0010096!2.67e-10!3;UBERON:0000033!3.31e-10!123;UBERON:0000064!1.25e-09!219;UBERON:0002298!1.75e-09!8;UBERON:0000025!7.00e-09!194;UBERON:0002771!8.91e-09!3;UBERON:0001871!1.56e-08!7;UBERON:0004733!2.76e-08!12;UBERON:0002028!2.76e-08!12;UBERON:0007277!2.76e-08!12;UBERON:0004732!1.37e-07!13;UBERON:0001954!2.39e-07!2;UBERON:0003022!2.39e-07!2;UBERON:0002421!2.39e-07!2;UBERON:0002600!2.39e-07!2;UBERON:0000200!2.85e-07!6;UBERON:0002133!3.23e-07!2;UBERON:0000341!5.34e-07!2;UBERON:0000477!6.39e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;5.98e-34;3!UBERON:0005174;5.98e-34;3!UBERON:0001137;5.98e-34;3!UBERON:0001896;1.07e-33;3!UBERON:0005290;1.07e-33;3!UBERON:0002298;2.01e-17;6!UBERON:0001954;1.14e-13;2!UBERON:0003022;1.14e-13;2!UBERON:0002421;1.14e-13;2!UBERON:0002600;1.14e-13;2!UBERON:0004733;3.27e-09;12!UBERON:0002028;3.27e-09;12!UBERON:0004732;1.42e-08;13!UBERON:0001052;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,3.94e-34,3;UBERON:0005174,3.94e-34,3;UBERON:0001137,3.94e-34,3;UBERON:0001896,1.08e-33,3;UBERON:0005290,1.08e-33,3;UBERON:0010096,1.08e-33,3;UBERON:0003076,7.74e-27,15;UBERON:0003057,7.74e-27,15;UBERON:0002298,2.01e-17,6;UBERON:0001954,1.21e-13,2;UBERON:0003022,1.21e-13,2;UBERON:0002421,1.21e-13,2;UBERON:0002600,1.21e-13,2;UBERON:0001049,3.97e-11,56;UBERON:0005068,3.97e-11,56;UBERON:0006241,3.97e-11,56;UBERON:0007135,3.97e-11,56;UBERON:0004733,3.27e-09,12;UBERON:0002028,3.27e-09,12;UBERON:0007277,3.27e-09,12;UBERON:0004732,1.42e-08,13;UBERON:0001017,1.06e-07,81;UBERON:0003075,1.06e-07,82;UBERON:0007284,1.06e-07,82;UBERON:0001052,1.69e-07,4;UBERON:0002346,2.36e-07,86;UBERON:0001016,5.81e-07,89 | |||
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| ||
|short_description=p@chr11:57003843..57003857,- | |short_description=p@chr11:57003843..57003857,- | ||
}} | }} |
Latest revision as of 22:52, 23 July 2015
Short description: | p@chr11:57003843..57003857, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57003843..57003857, - |
Coexpression cluster: | C3161_skeletal_spinal_hippocampus_medulla_teratocarcinoma_skin_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 3.94e-34 | 3 |
dorsal region element | 3.94e-34 | 3 |
dorsum | 3.94e-34 | 3 |
medulla oblongata | 1.08e-33 | 3 |
myelencephalon | 1.08e-33 | 3 |
future myelencephalon | 1.08e-33 | 3 |
posterior neural tube | 7.74e-27 | 15 |
chordal neural plate | 7.74e-27 | 15 |
brainstem | 2.01e-17 | 6 |
Ammon's horn | 1.21e-13 | 2 |
lobe parts of cerebral cortex | 1.21e-13 | 2 |
hippocampal formation | 1.21e-13 | 2 |
limbic lobe | 1.21e-13 | 2 |
neural tube | 3.97e-11 | 56 |
neural rod | 3.97e-11 | 56 |
future spinal cord | 3.97e-11 | 56 |
neural keel | 3.97e-11 | 56 |
segmental subdivision of hindbrain | 3.27e-09 | 12 |
hindbrain | 3.27e-09 | 12 |
presumptive hindbrain | 3.27e-09 | 12 |
segmental subdivision of nervous system | 1.42e-08 | 13 |
central nervous system | 1.06e-07 | 81 |
neural plate | 1.06e-07 | 82 |
presumptive neural plate | 1.06e-07 | 82 |
rectum | 1.69e-07 | 4 |
neurectoderm | 2.36e-07 | 86 |
nervous system | 5.81e-07 | 89 |