FFCP PHASE1:Hg19::chr12:111472632..111472643,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111472632..111472643,+ | |||
|coexpression_cluster_id=C3238 | |||
|description=CAGE_peak_at_chr12:111472632..111472643,+ | |description=CAGE_peak_at_chr12:111472632..111472643,+ | ||
|id=chr12:111472632..111472643,+ | |id=chr12:111472632..111472643,+ | ||
|ontology_enrichment_celltype=CL:0002368!2.39e-11!13;CL:0002328!3.11e-08!3;CL:0002076!5.27e-08!43 | |ontology_enrichment_celltype=CL:0002368!2.39e-11!13;CL:0002328!3.11e-08!3;CL:0002076!5.27e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002623;1.88e-15;3!CL:0000622;1.23e-09;5!CL:0000154;3.57e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.82e-15,3;CL:0000622,1.20e-09,5;CL:0000154,3.51e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.10e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.90e-38!41;UBERON:0001890!1.90e-38!41;UBERON:0006240!1.90e-38!41;UBERON:0003080!2.34e-37!42;UBERON:0000073!1.09e-36!94;UBERON:0001016!1.09e-36!94;UBERON:0001017!8.90e-36!82;UBERON:0005743!1.46e-35!86;UBERON:0000955!1.30e-34!69;UBERON:0006238!1.30e-34!69;UBERON:0001049!3.84e-34!57;UBERON:0005068!3.84e-34!57;UBERON:0006241!3.84e-34!57;UBERON:0007135!3.84e-34!57;UBERON:0002616!1.09e-32!59;UBERON:0001893!4.88e-31!34;UBERON:0001869!1.89e-30!32;UBERON:0002791!4.00e-29!33;UBERON:0002020!4.26e-28!34;UBERON:0003528!4.26e-28!34;UBERON:0002346!6.82e-28!90;UBERON:0002619!1.47e-27!22;UBERON:0003056!3.53e-27!61;UBERON:0001950!3.83e-27!20;UBERON:0003075!4.36e-26!86;UBERON:0007284!4.36e-26!86;UBERON:0000956!8.07e-24!25;UBERON:0000203!8.07e-24!25;UBERON:0007023!9.17e-24!115;UBERON:0000033!8.76e-23!123;UBERON:0000153!1.46e-22!129;UBERON:0007811!1.46e-22!129;UBERON:0000924!2.98e-21!173;UBERON:0006601!2.98e-21!173;UBERON:0004121!9.60e-20!169;UBERON:0001872!9.56e-13!5;UBERON:0000922!9.87e-10!612;UBERON:0001894!8.78e-09!7;UBERON:0006222!8.78e-09!7;UBERON:0002021!1.41e-08!5;UBERON:0004815!3.11e-08!3;UBERON:0002031!3.11e-08!3;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0000468!1.14e-07!659;UBERON:0001871!1.23e-07!7;UBERON:0000923!3.44e-07!604;UBERON:0005291!3.44e-07!604;UBERON:0006598!3.44e-07!604;UBERON:0002532!3.44e-07!604;UBERON:0000200!5.77e-07!6 | |ontology_enrichment_uberon=UBERON:0002780!1.90e-38!41;UBERON:0001890!1.90e-38!41;UBERON:0006240!1.90e-38!41;UBERON:0003080!2.34e-37!42;UBERON:0000073!1.09e-36!94;UBERON:0001016!1.09e-36!94;UBERON:0001017!8.90e-36!82;UBERON:0005743!1.46e-35!86;UBERON:0000955!1.30e-34!69;UBERON:0006238!1.30e-34!69;UBERON:0001049!3.84e-34!57;UBERON:0005068!3.84e-34!57;UBERON:0006241!3.84e-34!57;UBERON:0007135!3.84e-34!57;UBERON:0002616!1.09e-32!59;UBERON:0001893!4.88e-31!34;UBERON:0001869!1.89e-30!32;UBERON:0002791!4.00e-29!33;UBERON:0002020!4.26e-28!34;UBERON:0003528!4.26e-28!34;UBERON:0002346!6.82e-28!90;UBERON:0002619!1.47e-27!22;UBERON:0003056!3.53e-27!61;UBERON:0001950!3.83e-27!20;UBERON:0003075!4.36e-26!86;UBERON:0007284!4.36e-26!86;UBERON:0000956!8.07e-24!25;UBERON:0000203!8.07e-24!25;UBERON:0007023!9.17e-24!115;UBERON:0000033!8.76e-23!123;UBERON:0000153!1.46e-22!129;UBERON:0007811!1.46e-22!129;UBERON:0000924!2.98e-21!173;UBERON:0006601!2.98e-21!173;UBERON:0004121!9.60e-20!169;UBERON:0001872!9.56e-13!5;UBERON:0000922!9.87e-10!612;UBERON:0001894!8.78e-09!7;UBERON:0006222!8.78e-09!7;UBERON:0002021!1.41e-08!5;UBERON:0004815!3.11e-08!3;UBERON:0002031!3.11e-08!3;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0000468!1.14e-07!659;UBERON:0001871!1.23e-07!7;UBERON:0000923!3.44e-07!604;UBERON:0005291!3.44e-07!604;UBERON:0006598!3.44e-07!604;UBERON:0002532!3.44e-07!604;UBERON:0000200!5.77e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.33e-22;2!UBERON:0002757;3.33e-22;2!UBERON:0010134;3.33e-22;2!UBERON:0005408;3.33e-22;2!UBERON:0001899;3.33e-22;2!UBERON:0002902;9.10e-12;1!UBERON:0000998;9.10e-12;1!UBERON:0006868;9.10e-12;1!UBERON:0009899;9.10e-12;1!UBERON:0003296;1.36e-11;4!UBERON:0010133;1.36e-11;4!UBERON:0002784;1.36e-11;4!UBERON:0002021;2.00e-09;5!UBERON:0001950;3.14e-08;20!UBERON:0001044;3.57e-08;6!UBERON:0003293;3.57e-08;6!UBERON:0003294;3.57e-08;6!UBERON:0010047;3.57e-08;6!UBERON:0003408;3.57e-08;6!UBERON:0000167;3.57e-08;6!UBERON:0002619;1.58e-07;22!UBERON:0001894;5.42e-07;7!UBERON:0001017;6.86e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.17e-22,2;UBERON:0002757,3.17e-22,2;UBERON:0010134,3.17e-22,2;UBERON:0005408,3.17e-22,2;UBERON:0001899,3.17e-22,2;UBERON:0000998,7.76e-12,1;UBERON:0006868,7.76e-12,1;UBERON:0003296,1.33e-11,4;UBERON:0010133,1.33e-11,4;UBERON:0002784,1.33e-11,4;UBERON:0002902,1.63e-11,1;UBERON:0009899,1.63e-11,1;UBERON:0001017,3.44e-11,81;UBERON:0001016,5.84e-10,89;UBERON:0002021,2.57e-09,5;UBERON:0000955,1.15e-08,68;UBERON:0006238,1.15e-08,68;UBERON:0002780,1.47e-08,41;UBERON:0001890,1.47e-08,41;UBERON:0003080,1.47e-08,41;UBERON:0006240,1.47e-08,41;UBERON:0001044,3.51e-08,6;UBERON:0003293,3.51e-08,6;UBERON:0003294,3.51e-08,6;UBERON:0010047,3.51e-08,6;UBERON:0000167,3.51e-08,6;UBERON:0001950,4.10e-08,20;UBERON:0002619,2.01e-07,22;UBERON:0001894,5.34e-07,7;UBERON:0006222,5.34e-07,7;UBERON:0004121,6.65e-07,171;UBERON:0000924,6.65e-07,171;UBERON:0006601,6.65e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,1.72971060628596,4.46644493731044,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.886860307073351,1.83778720165568,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.668245123238271,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.001527445652,0,0.110929051536852,0.248385611765534,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0.327628914576042,0.169732529954025,0,0.619678821295011,0,0,0,0,0,0,0.513833800771676,0,2.07524016774297,0.41023272848151,0.504143392443436,1.03735878696327,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.620060389503552,0.570742291745161,0.546974809018219,0,0,0,0,3.21421101526972,1.68141861109412,0,0.455324382702595,0,0,0,0,0.657727735628491,0,0,0.627944742804112,0.157115589916002,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,2.21934020222135,6.91259661814092,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10440093535229,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0.476128862927481,0,0,0,0.318235791390825,1.41482032270754,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,1.72971060628596,4.46644493731044,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.886860307073351,1.83778720165568,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.668245123238271,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.001527445652,0,0.110929051536852,0.248385611765534,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0.327628914576042,0.169732529954025,0,0.619678821295011,0,0,0,0,0,0,0.513833800771676,0,2.07524016774297,0.41023272848151,0.504143392443436,1.03735878696327,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.620060389503552,0.570742291745161,0.546974809018219,0,0,0,0,3.21421101526972,1.68141861109412,0,0.455324382702595,0,0,0,0,0.657727735628491,0,0,0.627944742804112,0.157115589916002,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,2.21934020222135,6.91259661814092,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10440093535229,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0.476128862927481,0,0,0,0.318235791390825,1.41482032270754,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr12:111472632..111472643,+ | |short_description=p@chr12:111472632..111472643,+ | ||
}} | }} |
Latest revision as of 04:58, 24 July 2015
Short description: | p@chr12:111472632..111472643, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111472632..111472643, + |
Coexpression cluster: | C3238_Small_salivary_duodenum_temporal_Wilms_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.82e-15 | 3 |
acinar cell | 1.20e-09 | 5 |
protein secreting cell | 3.51e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.17e-22 | 2 |
regional part of epithalamus | 3.17e-22 | 2 |
secretory circumventricular organ | 3.17e-22 | 2 |
circumventricular organ | 3.17e-22 | 2 |
epithalamus | 3.17e-22 | 2 |
seminal vesicle | 7.76e-12 | 1 |
seminal fluid secreting gland | 7.76e-12 | 1 |
gland of diencephalon | 1.33e-11 | 4 |
neuroendocrine gland | 1.33e-11 | 4 |
regional part of diencephalon | 1.33e-11 | 4 |
occipital pole | 1.63e-11 | 1 |
pole of cerebral hemisphere | 1.63e-11 | 1 |
central nervous system | 3.44e-11 | 81 |
nervous system | 5.84e-10 | 89 |
occipital lobe | 2.57e-09 | 5 |
brain | 1.15e-08 | 68 |
future brain | 1.15e-08 | 68 |
regional part of forebrain | 1.47e-08 | 41 |
forebrain | 1.47e-08 | 41 |
anterior neural tube | 1.47e-08 | 41 |
future forebrain | 1.47e-08 | 41 |
saliva-secreting gland | 3.51e-08 | 6 |
gland of oral region | 3.51e-08 | 6 |
gland of foregut | 3.51e-08 | 6 |
oral gland | 3.51e-08 | 6 |
oral cavity | 3.51e-08 | 6 |
neocortex | 4.10e-08 | 20 |
regional part of cerebral cortex | 2.01e-07 | 22 |
diencephalon | 5.34e-07 | 7 |
future diencephalon | 5.34e-07 | 7 |
ectoderm-derived structure | 6.65e-07 | 171 |
ectoderm | 6.65e-07 | 171 |
presumptive ectoderm | 6.65e-07 | 171 |