FFCP PHASE1:Hg19::chr12:111480615..111480619,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111480615..111480619,+ | |||
|coexpression_cluster_id=C3239 | |||
|description=CAGE_peak_at_chr12:111480615..111480619,+ | |description=CAGE_peak_at_chr12:111480615..111480619,+ | ||
|id=chr12:111480615..111480619,+ | |id=chr12:111480615..111480619,+ | ||
|ontology_enrichment_celltype=CL:0000047!5.04e-07!8 | |ontology_enrichment_celltype=CL:0000047!5.04e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000333;8.17e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.45e-11;1 | |||
|ontology_enrichment_disease=DOID:171!1.12e-10!10;DOID:3095!3.78e-10!22;DOID:2994!3.78e-10!22 | |ontology_enrichment_disease=DOID:171!1.12e-10!10;DOID:3095!3.78e-10!22;DOID:2994!3.78e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:171;1.96e-09;10!DOID:169;1.74e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.24e-09,10;DOID:169,1.86e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.56e-27!22;UBERON:0000073!3.33e-27!94;UBERON:0001016!3.33e-27!94;UBERON:0001950!3.77e-27!20;UBERON:0002780!3.57e-26!41;UBERON:0001890!3.57e-26!41;UBERON:0006240!3.57e-26!41;UBERON:0001017!8.28e-26!82;UBERON:0005743!1.18e-25!86;UBERON:0003080!2.14e-25!42;UBERON:0001893!1.35e-24!34;UBERON:0001869!4.26e-24!32;UBERON:0001049!1.13e-23!57;UBERON:0005068!1.13e-23!57;UBERON:0006241!1.13e-23!57;UBERON:0007135!1.13e-23!57;UBERON:0000956!1.43e-23!25;UBERON:0000203!1.43e-23!25;UBERON:0002791!4.57e-23!33;UBERON:0000955!7.55e-23!69;UBERON:0006238!7.55e-23!69;UBERON:0002616!1.31e-22!59;UBERON:0002346!4.03e-21!90;UBERON:0002020!3.88e-20!34;UBERON:0003528!3.88e-20!34;UBERON:0003056!4.58e-20!61;UBERON:0000924!3.67e-17!173;UBERON:0006601!3.67e-17!173;UBERON:0003075!1.00e-16!86;UBERON:0007284!1.00e-16!86;UBERON:0000153!7.97e-16!129;UBERON:0007811!7.97e-16!129;UBERON:0000033!6.34e-15!123;UBERON:0004121!5.99e-14!169;UBERON:0001871!1.76e-13!7;UBERON:0007023!2.93e-12!115;UBERON:0000200!1.06e-08!6;UBERON:0002021!6.10e-08!5;UBERON:0001872!2.24e-07!5;UBERON:0002771!3.32e-07!3;UBERON:0003135!7.50e-07!11;UBERON:0000473!9.94e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.50e-14;3!UBERON:0004054;2.50e-14;3!UBERON:0000998;1.45e-11;1!UBERON:0006868;1.45e-11;1!UBERON:0001000;3.45e-11;1!UBERON:0005352;3.45e-11;1!UBERON:0005904;5.58e-11;4!UBERON:0000922;2.35e-10;49!UBERON:0000013;8.17e-09;5!UBERON:0002410;8.17e-09;5!UBERON:0001950;8.03e-08;20!UBERON:0002619;3.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.96e-14,3;UBERON:0004054,2.96e-14,3;UBERON:0000998,1.78e-11,1;UBERON:0006868,1.78e-11,1;UBERON:0001000,3.63e-11,1;UBERON:0005352,3.63e-11,1;UBERON:0005904,6.33e-11,4;UBERON:0000013,8.84e-09,5;UBERON:0002410,8.84e-09,5;UBERON:0001950,8.26e-08,20;UBERON:0001016,1.39e-07,89;UBERON:0002619,3.83e-07,22 | |||
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| ||
|short_description=p@chr12:111480615..111480619,+ | |short_description=p@chr12:111480615..111480619,+ | ||
}} | }} |
Latest revision as of 04:58, 24 July 2015
Short description: | p@chr12:111480615..111480619, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111480615..111480619, + |
Coexpression cluster: | C3239_parietal_Small_brain_salivary_temporal_occipital_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.96e-14 | 3 |
internal male genitalia | 2.96e-14 | 3 |
seminal vesicle | 1.78e-11 | 1 |
seminal fluid secreting gland | 1.78e-11 | 1 |
vas deferens | 3.63e-11 | 1 |
spermatic cord | 3.63e-11 | 1 |
duct of male reproductive system | 6.33e-11 | 4 |
sympathetic nervous system | 8.84e-09 | 5 |
autonomic nervous system | 8.84e-09 | 5 |
neocortex | 8.26e-08 | 20 |
nervous system | 1.39e-07 | 89 |
regional part of cerebral cortex | 3.83e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.24e-09 | 10 |
neuroendocrine tumor | 1.86e-07 | 6 |