FFCP PHASE1:Hg19::chr12:116944402..116944405,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:116944402..116944405,+ | |||
|description=CAGE_peak_at_chr12:116944402..116944405,+ | |description=CAGE_peak_at_chr12:116944402..116944405,+ | ||
|id=chr12:116944402..116944405,+ | |id=chr12:116944402..116944405,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.06e-31!42;CL:0000860!2.90e-28!45;CL:0002009!8.53e-21!65;CL:0002194!1.45e-18!63;CL:0000576!1.45e-18!63;CL:0000040!1.45e-18!63;CL:0000559!1.45e-18!63;CL:0000557!2.90e-18!71;CL:0000766!7.83e-18!76;CL:0000839!7.30e-16!70;CL:0000763!6.16e-11!112;CL:0000049!6.16e-11!112;CL:0000738!6.72e-09!140;CL:0002031!3.43e-08!124;CL:0002087!4.48e-08!119;CL:0002393!2.89e-07!9;CL:0002397!2.89e-07!9 | |ontology_enrichment_celltype=CL:0002057!6.06e-31!42;CL:0000860!2.90e-28!45;CL:0002009!8.53e-21!65;CL:0002194!1.45e-18!63;CL:0000576!1.45e-18!63;CL:0000040!1.45e-18!63;CL:0000559!1.45e-18!63;CL:0000557!2.90e-18!71;CL:0000766!7.83e-18!76;CL:0000839!7.30e-16!70;CL:0000763!6.16e-11!112;CL:0000049!6.16e-11!112;CL:0000738!6.72e-09!140;CL:0002031!3.43e-08!124;CL:0002087!4.48e-08!119;CL:0002393!2.89e-07!9;CL:0002397!2.89e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.17e-21;6!CL:0000404;5.17e-21;6!CL:0000860;4.23e-12;33!CL:0002057;4.23e-12;33!CL:0000473;2.61e-09;39!CL:0000234;2.61e-09;39!CL:0000576;5.41e-09;48!CL:0000766;4.36e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.18e-21,6;CL:0000031,5.18e-21,6;CL:0000404,5.18e-21,6;CL:0000860,2.30e-16,42;CL:0002057,2.30e-16,42;CL:0000047,8.07e-16,8;CL:0000473,4.03e-14,48;CL:0000234,4.03e-14,48;CL:0002009,6.15e-13,61;CL:0000557,1.24e-11,67;CL:0002194,5.56e-11,59;CL:0000576,5.56e-11,59;CL:0000040,5.56e-11,59;CL:0000559,5.56e-11,59;CL:0000766,1.00e-10,72;CL:0000839,1.14e-09,66;CL:0000763,5.71e-08,108;CL:0000049,5.71e-08,108 | |||
|ontology_enrichment_development_v019=CL:0000031;5.17e-21;6!CL:0002057;4.14e-12;42!UBERON:0010115;6.72e-09;1 | |||
|ontology_enrichment_disease=DOID:3095!2.91e-07!22;DOID:2994!2.91e-07!22 | |ontology_enrichment_disease=DOID:3095!2.91e-07!22;DOID:2994!2.91e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.38e-15!80;UBERON:0001474!1.60e-13!86;UBERON:0002390!6.83e-13!102;UBERON:0003061!6.83e-13!102;UBERON:0002193!6.50e-11!112;UBERON:0004765!2.96e-10!101;UBERON:0001434!2.96e-10!101;UBERON:0002405!1.23e-09!115 | |ontology_enrichment_uberon=UBERON:0002371!3.38e-15!80;UBERON:0001474!1.60e-13!86;UBERON:0002390!6.83e-13!102;UBERON:0003061!6.83e-13!102;UBERON:0002193!6.50e-11!112;UBERON:0004765!2.96e-10!101;UBERON:0001434!2.96e-10!101;UBERON:0002405!1.23e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;6.72e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.64e-10,76;UBERON:0002405,1.60e-09,93;UBERON:0001474,3.36e-09,82;UBERON:0002363,4.54e-09,1;UBERON:0007645,4.54e-09,1;UBERON:0007647,4.54e-09,1;UBERON:0010115,4.54e-09,1;UBERON:0002390,6.17e-09,98;UBERON:0003061,6.17e-09,98;UBERON:0004765,3.13e-08,90;UBERON:0002193,6.29e-08,108;UBERON:0001434,3.09e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.502170558379211,0,0,0,0.393364276848904,0.383829398097213,3.56077083626975,0,0,0,0,0,0,0,0,0.868043482863407,0,0,0,0,0,1.69808842831471,0.464858073811369,0.411167888021826,1.23882548358041,0.28769239232215,0.256160706529101,0.945928919554341,1.03423704220986,0,1.35426486594342,0.564727018627814,0.272906150057846,1.12361742222542,0,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,3.11411124497787,0,0,0.868755378820466,0,1.47311054395026,1.26584954976354,0.422510572623884,0.425208599930087,1.25795187305026,0.112328631146495,0.300353785683013,0.16072558669708,1.14005097496499,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0,0.365921118388786,0,0,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641715181398742,0,0,0,0,1.27587750330633,0,0,0,0,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,1.30998378285754,0,0,0,4.2620422020962,0.23874448473769,0,0,0,0.140669416410513,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,1.39010475182674,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41129722697529,2.47570985875021,2.49264202817511,0.2249738915515,3.0952078182318,0,0,0,0.262272940674991,0,0,0,0,0,9.15366735557099,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0,0.573409195690071,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,1.36329340684902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37100133567563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.713520544665411,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0.432626562123789,2.64949492153666,0.437062287854782,2.15387451719443,0.713921808193872,0.801652215796681,1.10273879441814,0.752122617877125,0.227336094654718,0,0,0.20686599172379,0,0.476128862927481,1.35636710655613,0.682821857254437,0.112131862580613,0,0,0.435433495793923,0,0,0,0.332660356546013,0,0,0,0.179650404213174,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr12:116944402..116944405,+ | |short_description=p@chr12:116944402..116944405,+ | ||
}} | }} |
Latest revision as of 05:24, 24 July 2015
Short description: | p@chr12:116944402..116944405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:116944402..116944405, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.18e-21 | 6 |
neuroblast | 5.18e-21 | 6 |
electrically signaling cell | 5.18e-21 | 6 |
classical monocyte | 2.30e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.30e-16 | 42 |
neuronal stem cell | 8.07e-16 | 8 |
defensive cell | 4.03e-14 | 48 |
phagocyte | 4.03e-14 | 48 |
macrophage dendritic cell progenitor | 6.15e-13 | 61 |
granulocyte monocyte progenitor cell | 1.24e-11 | 67 |
monopoietic cell | 5.56e-11 | 59 |
monocyte | 5.56e-11 | 59 |
monoblast | 5.56e-11 | 59 |
promonocyte | 5.56e-11 | 59 |
myeloid leukocyte | 1.00e-10 | 72 |
myeloid lineage restricted progenitor cell | 1.14e-09 | 66 |
myeloid cell | 5.71e-08 | 108 |
common myeloid progenitor | 5.71e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.64e-10 | 76 |
immune system | 1.60e-09 | 93 |
bone element | 3.36e-09 | 82 |
dura mater | 4.54e-09 | 1 |
future meninx | 4.54e-09 | 1 |
ectomeninx | 4.54e-09 | 1 |
future dura mater | 4.54e-09 | 1 |
hematopoietic system | 6.17e-09 | 98 |
blood island | 6.17e-09 | 98 |
skeletal element | 3.13e-08 | 90 |
hemolymphoid system | 6.29e-08 | 108 |
skeletal system | 3.09e-07 | 100 |