FFCP PHASE1:Hg19::chr12:12871211..12871230,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:12871211..12871230,- | |||
|coexpression_cluster_id=C719 | |||
|description=CAGE_peak_at_chr12:12871211..12871230,- | |||
|id=chr12:12871211..12871230,- | |||
|ontology_enrichment_celltype=CL:0000738!1.19e-35!140;CL:0000037!8.63e-30!172;CL:0000566!8.63e-30!172;CL:0000988!5.14e-27!182;CL:0002032!8.35e-26!165;CL:0000837!8.35e-26!165;CL:0002087!2.44e-21!119;CL:0002031!5.98e-21!124;CL:0000766!3.42e-20!76;CL:0000860!2.41e-18!45;CL:0000763!9.27e-18!112;CL:0000049!9.27e-18!112;CL:0002057!3.74e-17!42;CL:0002393!5.10e-17!9;CL:0002397!5.10e-17!9;CL:0000094!1.34e-14!8;CL:0000557!1.04e-13!71;CL:0002009!2.71e-13!65;CL:0000839!9.16e-12!70;CL:0002194!1.32e-11!63;CL:0000576!1.32e-11!63;CL:0000040!1.32e-11!63;CL:0000559!1.32e-11!63;CL:0000081!4.44e-10!11;CL:0000134!4.08e-09!358;CL:0002320!1.42e-08!365;CL:0000838!5.13e-08!52;CL:0000219!6.48e-08!390;CL:0000542!9.11e-08!53;CL:0000051!9.11e-08!53;CL:0000875!6.27e-07!3;CL:0002396!6.27e-07!3;CL:0000775!6.39e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.12e-49;6!CL:0002397;2.12e-49;6!CL:0000094;1.18e-37;8!CL:0000081;2.69e-27;11!CL:0000875;1.35e-26;3!CL:0002396;1.35e-26;3!CL:0000775;1.47e-26;3!CL:0000766;9.59e-19;69!CL:0000771;6.54e-18;2!CL:0000576;2.85e-14;48!CL:0000226;9.69e-12;3!CL:0000842;9.69e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.18e-74,9;CL:0002397,4.18e-74,9;CL:0000094,1.04e-37,8;CL:0000766,3.21e-34,72;CL:0000081,2.45e-27,11;CL:0000860,1.14e-26,42;CL:0002057,1.14e-26,42;CL:0000875,1.35e-26,3;CL:0002396,1.35e-26,3;CL:0000775,1.47e-26,3;CL:0000763,1.32e-24,108;CL:0000049,1.32e-24,108;CL:0000738,1.46e-23,136;CL:0000473,4.34e-23,48;CL:0000234,4.34e-23,48;CL:0002009,1.57e-20,61;CL:0000557,1.60e-18,67;CL:0000037,1.87e-18,168;CL:0002194,4.53e-18,59;CL:0000576,4.53e-18,59;CL:0000040,4.53e-18,59;CL:0000559,4.53e-18,59;CL:0000771,5.75e-18,2;CL:0000988,2.39e-17,177;CL:0000839,5.70e-16,66;CL:0002032,1.69e-15,161;CL:0000837,1.69e-15,161;CL:0000226,8.68e-12,3;CL:0000842,8.68e-12,3;CL:0002087,1.24e-11,115;CL:0002031,2.01e-09,120;CL:0000134,7.39e-08,354;CL:0002320,1.24e-07,361;CL:0000219,7.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-17;42!CL:0000049;1.43e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.40e-18!102;UBERON:0003061!4.40e-18!102;UBERON:0002193!2.07e-16!112;UBERON:0002371!3.29e-11!80;UBERON:0001474!1.30e-10!86;UBERON:0000178!2.96e-10!15;UBERON:0000179!2.96e-10!15;UBERON:0000463!2.96e-10!15;UBERON:0004765!1.78e-08!101;UBERON:0001434!1.78e-08!101;UBERON:0002384!2.94e-08!375;UBERON:0002405!7.70e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.87e-09;15!UBERON:0000179;6.87e-09;15!UBERON:0000463;6.87e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-21,98;UBERON:0003061,2.95e-21,98;UBERON:0002193,4.89e-19,108;UBERON:0002371,4.27e-16,76;UBERON:0001474,9.05e-15,82;UBERON:0004765,2.84e-13,90;UBERON:0002405,8.88e-13,93;UBERON:0001434,9.78e-12,100;UBERON:0000178,7.17e-09,15;UBERON:0000179,7.17e-09,15;UBERON:0000463,7.17e-09,15;UBERON:0003081,8.90e-09,203;UBERON:0002384,2.51e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,1.18009283054671,0.767658796194425,0.154816123316076,0,0,0,0,0.142169232487422,0,1.10799081706375,1.00272223735071,2.60413044859022,0,0,0,0,0.755751887377619,0.727752183563449,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0.564727018627814,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,6.5489138756702,7.01594189884644,6.28975936525128,3.70684482783434,2.4028302854641,2.73233497385036,9.4054205434612,9.34908382835724,8.03722276564389,0,0,0.889509253863555,0.853460445133014,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0.786021525498329,0.411202997999018,0,0.651844533267181,0,0,0,0.294605907474837,0.443067789167242,0,0,0.130059347559878,0,0,0,0,0.535081656179426,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.128343036279748,0,0,0,0,0,5.99205619157746,11.966458368161,15.7477895105693,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0,0,1.03384013061444,1.72571360654893,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:12871211..12871230,- | |||
}} |
Latest revision as of 06:39, 24 July 2015
Short description: | p@chr12:12871211..12871230, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12871211..12871230, - |
Coexpression cluster: | C719_Neutrophils_CD14CD16_CD14_blood_Eosinophils_Peripheral_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.95e-21 | 98 |
blood island | 2.95e-21 | 98 |
hemolymphoid system | 4.89e-19 | 108 |
bone marrow | 4.27e-16 | 76 |
bone element | 9.05e-15 | 82 |
skeletal element | 2.84e-13 | 90 |
immune system | 8.88e-13 | 93 |
skeletal system | 9.78e-12 | 100 |
blood | 7.17e-09 | 15 |
haemolymphatic fluid | 7.17e-09 | 15 |
organism substance | 7.17e-09 | 15 |
lateral plate mesoderm | 8.90e-09 | 203 |
connective tissue | 2.51e-07 | 371 |