FFCP PHASE1:Hg19::chr12:2906593..2906597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:2906593..2906597,+ | |||
|description=CAGE_peak_at_chr12:2906593..2906597,+ | |description=CAGE_peak_at_chr12:2906593..2906597,+ | ||
|id=chr12:2906593..2906597,+ | |id=chr12:2906593..2906597,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.36e-11;7!CL:0000586;2.36e-11;7!CL:0002262;2.60e-10;2!CL:1000398;2.60e-10;2!CL:0002363;2.60e-10;2!CL:0000182;5.39e-07;12 | |ontology_enrichment_celltype_v019=CL:0000039;2.36e-11;7!CL:0000586;2.36e-11;7!CL:0002262;2.60e-10;2!CL:1000398;2.60e-10;2!CL:0002363;2.60e-10;2!CL:0000182;5.39e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.97e-11,7;CL:0000586,1.97e-11,7;CL:0002262,2.49e-10,2;CL:1000398,2.49e-10,2;CL:0002363,3.58e-10,2;CL:0000008,3.58e-10,2;CL:0000182,5.47e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.08e-19;1!CL:0000008;2.60e-10;2!UBERON:0009117;3.20e-08;10!UBERON:0005564;3.20e-08;10!UBERON:0003056;1.93e-07;3 | |ontology_enrichment_development_v019=UBERON:0005425;1.08e-19;1!CL:0000008;2.60e-10;2!UBERON:0009117;3.20e-08;10!UBERON:0005564;3.20e-08;10!UBERON:0003056;1.93e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;5.01e-08;22!DOID:2994;5.01e-08;22 | |ontology_enrichment_disease_v019=DOID:3095;5.01e-08;22!DOID:2994;5.01e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,4.89e-08,22;DOID:2994,4.89e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-08!115;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.56e-08!115;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.08e-19;1!UBERON:0001785;1.08e-19;1!UBERON:0002464;1.08e-19;1!UBERON:0004904;1.08e-19;1!UBERON:0001021;1.08e-19;1!UBERON:0002134;2.97e-19;1!UBERON:0005208;2.97e-19;1!UBERON:0004145;2.97e-19;1!UBERON:0005946;2.97e-19;1!UBERON:0005965;2.97e-19;1!UBERON:0002078;2.97e-19;1!UBERON:0003714;1.57e-10;2!UBERON:0005162;1.57e-10;2!UBERON:0000122;1.57e-10;2!UBERON:0001281;2.60e-10;2!UBERON:0003497;2.60e-10;2!UBERON:0003909;2.60e-10;2!UBERON:0003566;2.60e-10;2!UBERON:0002081;2.60e-10;2!UBERON:0002133;2.60e-10;2!UBERON:0003835;2.60e-10;2!UBERON:0001777;2.60e-10;2!UBERON:0000473;4.73e-10;8!UBERON:0010313;3.89e-08;10!UBERON:0003135;1.49e-07;11!UBERON:0003978;2.71e-07;3!UBERON:0004151;2.71e-07;3!UBERON:0000946;2.71e-07;3!UBERON:0001280;2.71e-07;3!UBERON:0004647;2.71e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000941;1.08e-19;1!UBERON:0001785;1.08e-19;1!UBERON:0002464;1.08e-19;1!UBERON:0004904;1.08e-19;1!UBERON:0001021;1.08e-19;1!UBERON:0002134;2.97e-19;1!UBERON:0005208;2.97e-19;1!UBERON:0004145;2.97e-19;1!UBERON:0005946;2.97e-19;1!UBERON:0005965;2.97e-19;1!UBERON:0002078;2.97e-19;1!UBERON:0003714;1.57e-10;2!UBERON:0005162;1.57e-10;2!UBERON:0000122;1.57e-10;2!UBERON:0001281;2.60e-10;2!UBERON:0003497;2.60e-10;2!UBERON:0003909;2.60e-10;2!UBERON:0003566;2.60e-10;2!UBERON:0002081;2.60e-10;2!UBERON:0002133;2.60e-10;2!UBERON:0003835;2.60e-10;2!UBERON:0001777;2.60e-10;2!UBERON:0000473;4.73e-10;8!UBERON:0010313;3.89e-08;10!UBERON:0003135;1.49e-07;11!UBERON:0003978;2.71e-07;3!UBERON:0004151;2.71e-07;3!UBERON:0000946;2.71e-07;3!UBERON:0001280;2.71e-07;3!UBERON:0004647;2.71e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.95e-20,1;UBERON:0001785,8.95e-20,1;UBERON:0002464,8.95e-20,1;UBERON:0004904,8.95e-20,1;UBERON:0001021,8.95e-20,1;UBERON:0003902,8.95e-20,1;UBERON:0005425,8.95e-20,1;UBERON:0002134,2.25e-19,1;UBERON:0005208,2.25e-19,1;UBERON:0005946,2.25e-19,1;UBERON:0005965,2.25e-19,1;UBERON:0002078,2.25e-19,1;UBERON:0003714,1.43e-10,2;UBERON:0005162,1.43e-10,2;UBERON:0000122,1.43e-10,2;UBERON:0002081,2.27e-10,2;UBERON:0002133,2.27e-10,2;UBERON:0010227,2.27e-10,2;UBERON:0001281,2.49e-10,2;UBERON:0003497,2.49e-10,2;UBERON:0003909,2.49e-10,2;UBERON:0003835,2.49e-10,2;UBERON:0003566,3.58e-10,2;UBERON:0001777,3.58e-10,2;UBERON:0000473,4.03e-10,8;UBERON:0010313,4.19e-08,10;UBERON:0002342,4.19e-08,10;UBERON:0005062,4.19e-08,10;UBERON:0003135,1.33e-07,11;UBERON:0003978,2.47e-07,3;UBERON:0009751,2.47e-07,3;UBERON:0004151,2.47e-07,3;UBERON:0000946,2.47e-07,3;UBERON:0002523,2.47e-07,3;UBERON:0005983,2.47e-07,3;UBERON:0004145,2.47e-07,3;UBERON:0002165,2.47e-07,3;UBERON:0002062,2.47e-07,3;UBERON:0007280,2.47e-07,3;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3 | |||
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|short_description=p@chr12:2906593..2906597,+ | |short_description=p@chr12:2906593..2906597,+ | ||
}} | }} |
Latest revision as of 07:58, 24 July 2015
Short description: | p@chr12:2906593..2906597, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2906593..2906597, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.97e-11 | 7 |
germ cell | 1.97e-11 | 7 |
endothelial cell of sinusoid | 2.49e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.49e-10 | 2 |
keratocyte | 3.58e-10 | 2 |
migratory cranial neural crest cell | 3.58e-10 | 2 |
hepatocyte | 5.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.89e-08 | 22 |
germ cell cancer | 4.89e-08 | 22 |