FFCP PHASE1:Hg19::chr12:46807404..46807413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:46807404..46807413,+ | |||
|coexpression_cluster_id=C557 | |coexpression_cluster_id=C557 | ||
|description=CAGE_peak_at_chr12:46807404..46807413,+ | |description=CAGE_peak_at_chr12:46807404..46807413,+ | ||
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|ontology_enrichment_celltype=CL:0005020!1.54e-30!6;CL:0002138!1.54e-30!6;CL:0005022!1.54e-30!6;CL:0002139!1.20e-16!24;CL:0002144!4.99e-16!3;CL:0000115!2.66e-11!35;CL:0002078!6.60e-09!44;CL:0000213!8.92e-07!57;CL:0000215!8.92e-07!57 | |ontology_enrichment_celltype=CL:0005020!1.54e-30!6;CL:0002138!1.54e-30!6;CL:0005022!1.54e-30!6;CL:0002139!1.20e-16!24;CL:0002144!4.99e-16!3;CL:0000115!2.66e-11!35;CL:0002078!6.60e-09!44;CL:0000213!8.92e-07!57;CL:0000215!8.92e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.92e-74;6!CL:0002139;1.33e-33;24!CL:0000115;2.82e-20;36!CL:0002144;1.03e-17;3!CL:0002078;2.00e-15;45!CL:0000213;5.92e-08;58!CL:0000215;5.92e-08;58 | |ontology_enrichment_celltype_v019=CL:0002138;2.92e-74;6!CL:0002139;1.33e-33;24!CL:0000115;2.82e-20;36!CL:0002144;1.03e-17;3!CL:0002078;2.00e-15;45!CL:0000213;5.92e-08;58!CL:0000215;5.92e-08;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.58e-74,6;CL:0002138,2.58e-74,6;CL:0005022,2.58e-74,6;CL:0002139,1.33e-33,24;CL:0000115,9.32e-23,36;CL:0002078,2.09e-18,45;CL:0002144,1.12e-17,3;CL:0000213,1.72e-14,58;CL:0000215,1.72e-14,58;CL:0000222,2.26e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.92e-74;6 | |ontology_enrichment_development_v019=CL:0005022;2.92e-74;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!5.36e-23!8;UBERON:0004536!5.36e-23!8;UBERON:0006558!5.36e-23!8;UBERON:0002465!1.84e-18!10;UBERON:0001915!4.99e-16!3;UBERON:0001982!4.99e-16!3;UBERON:0006331!1.22e-15!3;UBERON:0002298!7.31e-13!8;UBERON:0002038!2.20e-12!1;UBERON:0009661!2.20e-12!1;UBERON:0002363!4.31e-12!1;UBERON:0007647!4.31e-12!1;UBERON:0010115!4.31e-12!1;UBERON:0002950!8.06e-07!2;UBERON:0001891!8.06e-07!2;UBERON:0009616!8.06e-07!2;UBERON:0002148!8.52e-07!2;UBERON:0009662!8.52e-07!2 | |ontology_enrichment_uberon=UBERON:0001473!5.36e-23!8;UBERON:0004536!5.36e-23!8;UBERON:0006558!5.36e-23!8;UBERON:0002465!1.84e-18!10;UBERON:0001915!4.99e-16!3;UBERON:0001982!4.99e-16!3;UBERON:0006331!1.22e-15!3;UBERON:0002298!7.31e-13!8;UBERON:0002038!2.20e-12!1;UBERON:0009661!2.20e-12!1;UBERON:0002363!4.31e-12!1;UBERON:0007647!4.31e-12!1;UBERON:0010115!4.31e-12!1;UBERON:0002950!8.06e-07!2;UBERON:0001891!8.06e-07!2;UBERON:0009616!8.06e-07!2;UBERON:0002148!8.52e-07!2;UBERON:0009662!8.52e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.02e-56;8!UBERON:0004536;5.02e-56;8!UBERON:0006558;5.02e-56;8!UBERON:0002465;4.50e-45;10!UBERON:0010523;1.03e-17;3!UBERON:0001915;1.03e-17;3!UBERON:0001982;1.03e-17;3!UBERON:0002405;2.15e-17;27!UBERON:0002193;1.04e-11;42!UBERON:0000055;3.28e-11;65!UBERON:0002049;5.94e-08;75!UBERON:0007798;5.94e-08;75 | |ontology_enrichment_uberon_v019=UBERON:0001473;5.02e-56;8!UBERON:0004536;5.02e-56;8!UBERON:0006558;5.02e-56;8!UBERON:0002465;4.50e-45;10!UBERON:0010523;1.03e-17;3!UBERON:0001915;1.03e-17;3!UBERON:0001982;1.03e-17;3!UBERON:0002405;2.15e-17;27!UBERON:0002193;1.04e-11;42!UBERON:0000055;3.28e-11;65!UBERON:0002049;5.94e-08;75!UBERON:0007798;5.94e-08;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.57e-56,8;UBERON:0004536,4.57e-56,8;UBERON:0006558,4.57e-56,8;UBERON:0002465,4.18e-45,10;UBERON:0010523,1.12e-17,3;UBERON:0001915,1.12e-17,3;UBERON:0001982,1.12e-17,3;UBERON:0000055,1.71e-12,68;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0004535,4.22e-08,109;UBERON:0001009,6.64e-08,112 | |||
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|short_description=p@chr12:46807404..46807413,+ | |short_description=p@chr12:46807404..46807413,+ | ||
}} | }} |
Latest revision as of 08:41, 24 July 2015
Short description: | p@chr12:46807404..46807413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:46807404..46807413, + |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.58e-74 | 6 |
endothelial cell of lymphatic vessel | 2.58e-74 | 6 |
vascular lymphangioblast | 2.58e-74 | 6 |
endothelial cell of vascular tree | 1.33e-33 | 24 |
endothelial cell | 9.32e-23 | 36 |
meso-epithelial cell | 2.09e-18 | 45 |
capillary endothelial cell | 1.12e-17 | 3 |
lining cell | 1.72e-14 | 58 |
barrier cell | 1.72e-14 | 58 |
mesodermal cell | 2.26e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.57e-56 | 8 |
lymph vasculature | 4.57e-56 | 8 |
lymphatic part of lymphoid system | 4.57e-56 | 8 |
lymphoid system | 4.18e-45 | 10 |
microcirculatory vessel | 1.12e-17 | 3 |
endothelium of capillary | 1.12e-17 | 3 |
capillary | 1.12e-17 | 3 |
vessel | 1.71e-12 | 68 |
vasculature | 5.31e-11 | 78 |
vascular system | 5.31e-11 | 78 |
cardiovascular system | 4.22e-08 | 109 |
circulatory system | 6.64e-08 | 112 |