FFCP PHASE1:Hg19::chr12:56349615..56349624,-: Difference between revisions
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|id=chr12:56349615..56349624,-
|short_description=p@chr12:56349615..56349624,-
|description=CAGE_peak_at_chr12:56349615..56349624,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:56349615..56349624,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr12:56349615..56349624,- | |||
|id=chr12:56349615..56349624,- | |||
|ontology_enrichment_celltype=CL:0000147!1.08e-23!14;CL:0000148!1.50e-21!10;CL:0000541!1.50e-21!10;CL:0000039!4.42e-18!7;CL:0000586!4.42e-18!7;CL:0002566!1.41e-14!1;CL:0000149!2.26e-14!4;CL:0000710!6.24e-11!20;CL:0000325!1.68e-08!39;CL:0000075!3.72e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.30e-51;7!CL:0000586;2.30e-51;7!CL:0000083;3.42e-11;4!CL:0000149;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.73e-51,7;CL:0000586,2.73e-51,7;CL:0000083,3.10e-11,4;CL:0000149,3.42e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!6.97e-27!2;DOID:1799!6.22e-15!1;DOID:10165!6.22e-15!1;DOID:1798!6.22e-15!1;DOID:178!2.41e-14!1;DOID:326!2.41e-14!1;DOID:3978!2.41e-14!1;DOID:3394!2.41e-14!1;DOID:5844!2.41e-14!1;DOID:114!8.04e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.21e-40;1!DOID:10165;2.21e-40;1!DOID:1798;2.21e-40;1!DOID:3095;4.85e-17;22!DOID:2994;4.85e-17;22!DOID:1793;3.42e-11;4!DOID:170;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.48e-40,1;DOID:10165,1.48e-40,1;DOID:1798,1.48e-40,1;DOID:3095,5.13e-17,22;DOID:2994,5.13e-17,22;DOID:1793,3.10e-11,4;DOID:170,6.34e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0005418!9.36e-15!1;UBERON:0001389!9.36e-15!1;UBERON:0000026!9.36e-15!1;UBERON:0008784!9.36e-15!1;UBERON:0006058!9.36e-15!1;UBERON:0003663!9.36e-15!1;UBERON:0001383!9.36e-15!1;UBERON:0004256!9.36e-15!1;UBERON:0002529!9.36e-15!1;UBERON:0004708!9.36e-15!1;UBERON:0002101!9.36e-15!1;UBERON:0004709!9.36e-15!1;UBERON:0003661!9.36e-15!1;UBERON:0002471!9.36e-15!1;UBERON:0004357!9.36e-15!1;UBERON:0009872!9.36e-15!1;UBERON:0004347!9.36e-15!1;UBERON:0005420!9.36e-15!1;UBERON:0005732!9.36e-15!1;UBERON:0006057!9.36e-15!1;UBERON:0000978!9.36e-15!1;UBERON:0002103!9.36e-15!1;UBERON:0001665!9.36e-15!1;UBERON:0003823!9.36e-15!1;UBERON:0000154!9.36e-15!1;UBERON:0005733!9.36e-15!1;UBERON:0005730!9.36e-15!1;UBERON:0000966!1.95e-11!5;UBERON:0005388!1.95e-11!5;UBERON:0001802!1.95e-11!5;UBERON:0001630!5.02e-08!2;UBERON:0005090!5.02e-08!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:56349615..56349624,- | |||
}} | }} |
Latest revision as of 10:15, 24 July 2015
Short description: | p@chr12:56349615..56349624, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56349615..56349624, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.73e-51 | 7 |
germ cell | 2.73e-51 | 7 |
epithelial cell of pancreas | 3.10e-11 | 4 |
visual pigment cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.48e-40 | 1 |
endocrine pancreas cancer | 1.48e-40 | 1 |
pancreatic endocrine carcinoma | 1.48e-40 | 1 |
germ cell and embryonal cancer | 5.13e-17 | 22 |
germ cell cancer | 5.13e-17 | 22 |
pancreatic cancer | 3.10e-11 | 4 |
endocrine gland cancer | 6.34e-08 | 6 |