FFCP PHASE1:Hg19::chr12:6446029..6446033,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6446029..6446033,+
|short_description=p@chr12:6446029..6446033,+
|description=CAGE_peak_at_chr12:6446029..6446033,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:6446029..6446033,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr12:6446029..6446033,+ | |||
|id=chr12:6446029..6446033,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.06e-07!42;CL:0000860!2.67e-07!45;CL:0000003!4.82e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.33e-22;33!CL:0002057;3.33e-22;33!CL:0000473;7.28e-16;39!CL:0000234;7.28e-16;39!CL:0000576;6.83e-11;48!CL:0000775;3.34e-10;3!CL:0000346;5.42e-10;3!CL:1000428;5.42e-10;3!CL:0000094;2.72e-08;8!CL:0002591;4.10e-08;1!CL:0000766;4.12e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.49e-18,42;CL:0002057,1.49e-18,42;CL:0000766,2.83e-16,72;CL:0000473,5.50e-16,48;CL:0000234,5.50e-16,48;CL:0002194,2.16e-12,59;CL:0000576,2.16e-12,59;CL:0000040,2.16e-12,59;CL:0000559,2.16e-12,59;CL:0002009,6.28e-12,61;CL:0000763,1.17e-11,108;CL:0000049,1.17e-11,108;CL:0000839,6.85e-11,66;CL:0000557,1.06e-10,67;CL:0000775,2.36e-10,3;CL:0000346,3.93e-10,3;CL:1000428,3.93e-10,3;CL:0000738,1.24e-08,136;CL:0000094,2.37e-08,8;CL:0000988,4.64e-08,177;CL:0002032,5.48e-08,161;CL:0000837,5.48e-08,161;CL:0002591,7.16e-08,1;CL:0000037,1.58e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.42e-10;3!UBERON:0001992;5.42e-10;3!UBERON:0002067;2.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.93e-10,3;UBERON:0001992,3.93e-10,3;UBERON:0002371,3.20e-09,76;UBERON:0001474,2.06e-08,82;UBERON:0002390,4.21e-08,98;UBERON:0003061,4.21e-08,98;UBERON:0004765,1.67e-07,90;UBERON:0002067,2.56e-07,9;UBERON:0004016,2.56e-07,9;UBERON:0010083,2.56e-07,9;UBERON:0002405,3.34e-07,93;UBERON:0002193,3.69e-07,108 | |||
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| ||
|short_description=p@chr12:6446029..6446033,+ | |||
}} | }} |
Latest revision as of 11:14, 24 July 2015
Short description: | p@chr12:6446029..6446033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6446029..6446033, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.49e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-18 | 42 |
myeloid leukocyte | 2.83e-16 | 72 |
defensive cell | 5.50e-16 | 48 |
phagocyte | 5.50e-16 | 48 |
monopoietic cell | 2.16e-12 | 59 |
monocyte | 2.16e-12 | 59 |
monoblast | 2.16e-12 | 59 |
promonocyte | 2.16e-12 | 59 |
macrophage dendritic cell progenitor | 6.28e-12 | 61 |
myeloid cell | 1.17e-11 | 108 |
common myeloid progenitor | 1.17e-11 | 108 |
myeloid lineage restricted progenitor cell | 6.85e-11 | 66 |
granulocyte monocyte progenitor cell | 1.06e-10 | 67 |
neutrophil | 2.36e-10 | 3 |
hair follicle dermal papilla cell | 3.93e-10 | 3 |
stem cell of epidermis | 3.93e-10 | 3 |
leukocyte | 1.24e-08 | 136 |
granulocyte | 2.37e-08 | 8 |
hematopoietic cell | 4.64e-08 | 177 |
hematopoietic oligopotent progenitor cell | 5.48e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.48e-08 | 161 |
smooth muscle cell of the pulmonary artery | 7.16e-08 | 1 |
hematopoietic stem cell | 1.58e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.93e-10 | 3 |
papillary layer of dermis | 3.93e-10 | 3 |
bone marrow | 3.20e-09 | 76 |
bone element | 2.06e-08 | 82 |
hematopoietic system | 4.21e-08 | 98 |
blood island | 4.21e-08 | 98 |
skeletal element | 1.67e-07 | 90 |
dermis | 2.56e-07 | 9 |
dermatome | 2.56e-07 | 9 |
future dermis | 2.56e-07 | 9 |
immune system | 3.34e-07 | 93 |
hemolymphoid system | 3.69e-07 | 108 |