FFCP PHASE1:Hg19::chr12:65996599..65996667,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:65996599..65996667,+ to FFCP PHASE1:Hg19::chr12:65996599..65996667,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539116,ENST00000541391_5end | |||
|cluster_id=chr12:65996599..65996667,+ | |||
|description=CAGE_peak_1_at_ENST00000539116_5end,CAGE_peak_1_at_ENST00000541391_5end | |||
|id=chr12:65996599..65996667,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.40e-31!180;CL:0002371!7.95e-22!591;CL:0000220!2.01e-21!246;CL:0002321!9.95e-21!248;CL:0000144!1.97e-19!625;CL:0000548!4.73e-18!679;CL:0000004!4.73e-18!679;CL:0000255!4.73e-18!679;CL:0000012!1.06e-17!682;CL:0000222!2.61e-17!119;CL:0000057!9.37e-17!75;CL:0000680!9.26e-16!57;CL:0000056!9.26e-16!57;CL:0000355!9.26e-16!57;CL:0000183!4.49e-14!59;CL:0000187!5.29e-14!54;CL:0000393!2.23e-11!60;CL:0000211!2.23e-11!60;CL:0000192!4.66e-11!42;CL:0000514!4.66e-11!42;CL:0000003!3.91e-10!722;CL:0000359!1.88e-09!32;CL:0002620!1.81e-07!23;CL:0002139!3.11e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.20e-10;32!CL:0000192;3.42e-09;43!CL:0000187;6.29e-09;55!CL:0002620;3.11e-08;23!CL:0002077;8.83e-08;34!CL:0000680;3.86e-07;7!CL:0000057;5.77e-07;73!CL:0002139;7.84e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.74e-19,250;CL:0000680,2.65e-17,58;CL:0000056,2.65e-17,58;CL:0000355,2.65e-17,58;CL:0000057,4.22e-17,76;CL:0000222,7.09e-16,121;CL:0000187,2.98e-15,55;CL:0000192,1.44e-12,43;CL:0000514,1.44e-12,43;CL:0000393,3.63e-12,61;CL:0000211,3.63e-12,61;CL:0000359,2.03e-11,32;CL:0000723,2.29e-09,433;CL:0000048,1.72e-08,427;CL:0000034,2.30e-08,441;CL:0002077,2.49e-08,34;CL:0002620,3.23e-08,23;CL:0002139,6.33e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000355;9.02e-10;58!CL:0000514;3.42e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.63e-23!83;UBERON:0002329!4.63e-23!83;UBERON:0003077!4.63e-23!83;UBERON:0003059!4.63e-23!83;UBERON:0007282!4.63e-23!83;UBERON:0009618!4.63e-23!83;UBERON:0007285!4.63e-23!83;UBERON:0000486!7.68e-21!82;UBERON:0004290!2.31e-17!70;UBERON:0002049!4.38e-17!79;UBERON:0007798!4.38e-17!79;UBERON:0003102!2.17e-15!95;UBERON:0005256!2.32e-15!143;UBERON:0001134!1.88e-14!61;UBERON:0002036!1.88e-14!61;UBERON:0003082!1.88e-14!61;UBERON:0000055!7.44e-14!69;UBERON:0002385!8.21e-14!63;UBERON:0001015!8.21e-14!63;UBERON:0000383!8.21e-14!63;UBERON:0001981!3.92e-12!60;UBERON:0007500!3.92e-12!60;UBERON:0004537!3.92e-12!60;UBERON:0006965!3.92e-12!60;UBERON:0004535!4.00e-12!110;UBERON:0004872!4.69e-12!84;UBERON:0001637!4.98e-12!42;UBERON:0003509!4.98e-12!42;UBERON:0004572!4.98e-12!42;UBERON:0000490!2.19e-11!138;UBERON:0000119!2.32e-11!312;UBERON:0001009!5.10e-11!113;UBERON:0000483!9.66e-11!309;UBERON:0002199!9.95e-10!45;UBERON:0002416!9.95e-10!45;UBERON:0003914!1.00e-09!118;UBERON:0002097!1.03e-09!40;UBERON:0000475!1.66e-09!365;UBERON:0004573!2.48e-09!33;UBERON:0004571!2.48e-09!33;UBERON:0002100!3.93e-09!216;UBERON:0000467!2.75e-08!625;UBERON:0000480!3.98e-08!626;UBERON:0001444!5.91e-08!48;UBERON:0000468!1.10e-07!659;UBERON:0000947!1.67e-07!21;UBERON:0010191!1.67e-07!21;UBERON:0000075!3.50e-07!13;UBERON:0005944!3.50e-07!13;UBERON:0004288!3.50e-07!13;UBERON:0003089!3.50e-07!13;UBERON:0000481!7.16e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.51e-10;42!UBERON:0003509;2.51e-10;42!UBERON:0004572;2.51e-10;42!UBERON:0004573;4.00e-10;33!UBERON:0004571;4.00e-10;33!UBERON:0002385;3.23e-09;31!UBERON:0001015;3.23e-09;31!UBERON:0000383;3.23e-09;31!UBERON:0002097;6.68e-09;41!UBERON:0000075;7.77e-09;16!UBERON:0002049;1.13e-08;75!UBERON:0007798;1.13e-08;75!UBERON:0000947;2.70e-08;21!UBERON:0010191;2.70e-08;21!UBERON:0000055;3.47e-08;65!UBERON:0002199;6.31e-08;46!UBERON:0002416;6.31e-08;46!UBERON:0010371;7.35e-08;31!UBERON:0007500;8.53e-08;56!UBERON:0001981;8.53e-08;56!UBERON:0004537;8.53e-08;56!UBERON:0003102;8.97e-08;50!UBERON:0002204;1.97e-07;70!UBERON:0001828;4.07e-07;8!UBERON:0003729;4.16e-07;13!UBERON:0001434;6.75e-07;36 | |||
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|phase1_expression=1.45342703416445,1.49870366723688,0.281908808191942,0,0,0.872338524100369,0,3.15859936713415,0,0.737201809504527,0.697801167972428,0.218441372130172,0.263766978228454,14.1093642374453,4.63956326019082,5.3786011716142,5.42425075221579,5.11217063271161,6.34312638427659,0.492484232307152,1.42800483870977,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,1.83884244895785,1.8072355126695,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37898272294647,1.29096936716765,0,0,0,0,1.53041946185451,0.320929027076094,0.639337125799041,0,0,0,2.90209238628584,3.40431134814684,0.622822248995575,0,0,0,0.605399502633369,4.41933163185078,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,1.0843174571537,0.50133791063589,0,7.15757352345989,3.40644409211845,6.14476311566441,7.9822583086523,3.68906099911129,0.0654895377488563,3.27865759463288,4.44941331341315,0,0,0,0,0,0,5.36658499890104,4.30117297553062,4.85996702250632,2.26123176769604,8.80948816040802,3.30141650328081,2.92592953151535,12.6624211992971,8.18262404179434,4.68608857870538,0.805658634218294,6.84244895146661,0.732186172644509,0.735326160691737,4.0507097394088,8.30487473041942,4.4905874525234,4.0540132973996,0,1.89853131913626,5.49605231791222,0,0,2.18047026071267,0.993943903390637,10.1304409331664,20.2586046644225,2.86836620748814,7.4480360261655,0.560677600142307,2.1349799145941,5.92002116201184,5.29058760179603,4.71487352243908,4.7403951902903,0.756787138224657,0,1.64025002283658,11.8620829195522,5.13424639390004,11.8064457635923,5.98915943083201,4.69431538667581,5.05622904128095,24.2943463793323,15.2314553466592,15.3955413951891,5.94001428641027,7.41800787835671,1.82032272387605,1.43723628363248,13.2985530023712,13.7630371859161,21.6110010077663,6.14568669233173,11.6465362403627,6.76071265079686,7.94025282120147,1.97328599257748,2.13557388818567,4.02670612203168,4.80145753735044,5.15262646192194,1.28820270022815,2.60563598864226,3.03797398034279,0.389748020644795,3.28163906517349,2.48534726334208,3.87950536365149,2.13005755509969,1.71278566986988,5.08681776931463,8.50347753918506,5.45492241181669,7.4569194801141,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,6.03678306441573,7.21879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,6.51957679134397,7.24351883696929,4.49607013030478,8.24337573775373,21.3879308316203,1.62904152655162,2.07986957055916,5.77325368101093,1.62302566965108,2.11335649624479,5.34155856715973,2.77791307545966,1.71228737011138,0,0,0,0.702012795417713,0.148631162288728,5.62403003920662,5.87937448696008,8.22295564005842,4.65704318054811,7.55648240136301,3.06706143332169,1.47798971368783,0,0,0,0,2.73040945456327,5.72982638337417,0,1.71072446022705,6.78661451841935,17.1195542971033,2.5724378936752,3.7003257833969,0.87192013766656,16.5011143097138,10.2124655448644,0,10.143633030672,4.78688609852767,4.16029747645464,9.25946547343712,1.41849132023278,6.39413229638638,0.857867961948885,0,0.823240336780769,7.49193223875591,0,2.37585561880029,4.82303003295338,9.58686804460323,2.69927076191554,0,0.502257091432126,0,2.15662369942424,0,9.98458335285029,10.1346914667305,17.670963739333,10.206474904674,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,2.82190430954022,7.00238729483548,3.25518028439683,1.24782516918484,4.63915370872621,1.10391690523754,5.50564650465752,7.52365249319297,2.27407504055985,3.10419213877515,7.97070718242524,6.82165923604302,11.9899387965954,0.587403472388222,0.343143423810856,0,0,0,0,0,0.30239029332968,1.48864684691266,0.61384789315225,0.561320188866147,1.66580894032411,0,0.482561763430822,0,6.63101683351419,11.0088269694139,11.169293217878,8.30807086693794,7.43746422143739,0,6.21570057940183,4.78821142466661,3.78887678943202,7.28364672026868,2.36023946926963,0.451199612907412,1.92538342761037,0.784349769176855,0,1.37217117560738,4.54933536283586,2.89159298970077,2.15915916102139,0,1.35473218771926,1.00337954770971,0.254876273045038,0.831076008928724,1.34324852833307,0,0,1.28225062558195,0.328014645699706,0.650756789328606,0,0.457847324091717,0.495056999523528,7.46545199395024,8.45078319847478,3.21367859688319,2.90012154876366,6.00789606747113,4.1445992176055,6.61615547925747,17.1872391789238,9.1360517165964,10.141968662516,0.712256285173899,4.62797763010739,4.80475168412765,40.198004435794,1.0115778085555,1.85938219718914,5.66662224295152,8.3644472419272,4.00443654228915,6.38767236380426,1.73986598415015,2.7798632865588,6.01124524316363,10.4204343420707,6.64396791909324,1.33441135746677,3.07077349573601,1.71175595213568,10.18250393363,1.56989728039846,4.67668389716618,5.21620356498504,3.29874726567922,4.65019707618627,0,1.26377536871694,0,9.26111260598881,0,0.409499734223957,0.989838023675989,4.52032466480971,3.85955740482287,6.6343897524122,5.26141062304515,4.6302042741335,4.59126326432643,5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| ||
|short_description=p1@ENST00000539116,p1@ENST00000541391 | |||
}} | }} |
Latest revision as of 11:25, 24 July 2015
Short description: | p1@ENST00000539116, p1@ENST00000541391 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000539116_5end, CAGE_peak_1_at_ENST00000541391_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539116, ENST00000541391_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.74e-19 | 250 |
muscle precursor cell | 2.65e-17 | 58 |
myoblast | 2.65e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-17 | 58 |
fibroblast | 4.22e-17 | 76 |
mesodermal cell | 7.09e-16 | 121 |
muscle cell | 2.98e-15 | 55 |
smooth muscle cell | 1.44e-12 | 43 |
smooth muscle myoblast | 1.44e-12 | 43 |
electrically responsive cell | 3.63e-12 | 61 |
electrically active cell | 3.63e-12 | 61 |
vascular associated smooth muscle cell | 2.03e-11 | 32 |
somatic stem cell | 2.29e-09 | 433 |
multi fate stem cell | 1.72e-08 | 427 |
stem cell | 2.30e-08 | 441 |
ecto-epithelial cell | 2.49e-08 | 34 |
skin fibroblast | 3.23e-08 | 23 |
endothelial cell of vascular tree | 6.33e-07 | 24 |