FFCP PHASE1:Hg19::chr12:76334597..76334607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:76334597..76334607,+ | |||
|description=CAGE_peak_at_chr12:76334597..76334607,+ | |||
|id=chr12:76334597..76334607,+ | |||
|ontology_enrichment_celltype=CL:0000223!4.43e-16!59;CL:0002076!1.08e-15!43;CL:0000066!2.95e-10!254;CL:0002368!2.17e-09!13;CL:0000083!1.48e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.22e-12;9!CL:0002632;5.22e-12;9!CL:0000322;1.14e-09;3!CL:0000307;1.60e-09;3!CL:0002368;1.31e-08;13!CL:0002076;5.77e-08;42!CL:0000083;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,5.83e-12,9;CL:0002632,5.83e-12,9;CL:0000223,6.25e-11,58;CL:0002076,7.57e-10,42;CL:0000322,1.19e-09,3;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0002368,1.42e-08,13;CL:0000083,1.31e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.60e-09;3 | |||
|ontology_enrichment_disease=DOID:4074!3.18e-16!2;DOID:4905!3.18e-16!2;DOID:3498!3.18e-16!2;DOID:1749!1.18e-13!14;DOID:1793!1.48e-08!4;DOID:305!4.76e-08!106;DOID:0050687!1.15e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.34e-28;14!DOID:4074;6.43e-14;2!DOID:4905;6.43e-14;2!DOID:3498;6.43e-14;2!DOID:3910;7.77e-14;2!DOID:1909;1.29e-13;2!DOID:1793;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.20e-28,14;DOID:4074,6.43e-14,2;DOID:4905,6.43e-14,2;DOID:3498,6.43e-14,2;DOID:3910,8.28e-14,2;DOID:1909,1.21e-13,2;DOID:305,1.53e-08,106;DOID:0050687,1.64e-08,143;DOID:1793,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000997!4.19e-09!1;UBERON:0005056!4.19e-09!1;UBERON:0003343!1.14e-08!4;UBERON:0004785!1.14e-08!4;UBERON:0003729!4.25e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0003343;1.34e-25;4!UBERON:0004785;1.34e-25;4!UBERON:0000974;1.93e-17;6!UBERON:0004903;7.77e-14;2!UBERON:0002173;7.77e-14;2!UBERON:0002186;7.77e-14;2!UBERON:0004821;1.14e-09;3!UBERON:0007499;1.14e-09;3!UBERON:0003215;1.14e-09;3!UBERON:0010368;1.14e-09;3!UBERON:0009911;1.14e-09;3!UBERON:0002299;1.14e-09;3!UBERON:0006524;1.14e-09;3!UBERON:0008874;1.14e-09;3!UBERON:0002169;1.14e-09;3!UBERON:0004894;1.14e-09;3!UBERON:0003729;1.39e-08;13!UBERON:0007196;1.40e-07;15!UBERON:0001558;1.40e-07;15!UBERON:0009856;1.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.93e-26,1;UBERON:0005056,5.93e-26,1;UBERON:0003343,1.43e-25,4;UBERON:0004785,1.43e-25,4;UBERON:0004903,8.28e-14,2;UBERON:0002173,8.28e-14,2;UBERON:0002186,8.28e-14,2;UBERON:0000974,7.30e-11,10;UBERON:0004821,1.19e-09,3;UBERON:0003215,1.19e-09,3;UBERON:0010368,1.19e-09,3;UBERON:0009911,1.19e-09,3;UBERON:0002299,1.19e-09,3;UBERON:0006524,1.19e-09,3;UBERON:0008874,1.19e-09,3;UBERON:0002169,1.19e-09,3;UBERON:0004894,1.19e-09,3;UBERON:0003729,1.42e-08,13;UBERON:0007196,1.49e-07,15;UBERON:0001558,1.49e-07,15 | |||
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|short_description=p@chr12:76334597..76334607,+ | |||
}} | }} |
Latest revision as of 12:25, 24 July 2015
Short description: | p@chr12:76334597..76334607, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76334597..76334607, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 5.83e-12 | 9 |
epithelial cell of lower respiratory tract | 5.83e-12 | 9 |
endodermal cell | 6.25e-11 | 58 |
endo-epithelial cell | 7.57e-10 | 42 |
pneumocyte | 1.19e-09 | 3 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
respiratory epithelial cell | 1.42e-08 | 13 |
epithelial cell of pancreas | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.93e-26 | 1 |
external female genitalia | 5.93e-26 | 1 |
mucosa of oral region | 1.43e-25 | 4 |
respiratory system mucosa | 1.43e-25 | 4 |
bronchoalveolar duct junction | 8.28e-14 | 2 |
alveolar duct | 8.28e-14 | 2 |
bronchiole | 8.28e-14 | 2 |
neck | 7.30e-11 | 10 |
pulmonary alveolus epithelium | 1.19e-09 | 3 |
alveolus | 1.19e-09 | 3 |
pulmonary lobule | 1.19e-09 | 3 |
lobule | 1.19e-09 | 3 |
alveolus of lung | 1.19e-09 | 3 |
alveolar system | 1.19e-09 | 3 |
pulmonary acinus | 1.19e-09 | 3 |
alveolar sac | 1.19e-09 | 3 |
alveolar wall | 1.19e-09 | 3 |
mouth mucosa | 1.42e-08 | 13 |
tracheobronchial tree | 1.49e-07 | 15 |
lower respiratory tract | 1.49e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.20e-28 | 14 |
pancreas adenocarcinoma | 6.43e-14 | 2 |
pancreatic carcinoma | 6.43e-14 | 2 |
pancreatic ductal adenocarcinoma | 6.43e-14 | 2 |
lung adenocarcinoma | 8.28e-14 | 2 |
melanoma | 1.21e-13 | 2 |
carcinoma | 1.53e-08 | 106 |
cell type cancer | 1.64e-08 | 143 |
pancreatic cancer | 1.31e-07 | 4 |