FFCP PHASE1:Hg19::chr12:8780181..8780185,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:8780181..8780185,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr12:8780181..8780185,+ | |||
|id=chr12:8780181..8780185,+ | |||
|ontology_enrichment_celltype=CL:0002274!4.78e-14!5;CL:0000457!4.78e-14!5;CL:0002191!4.78e-14!5;CL:0000097!4.78e-14!5;CL:0000831!4.78e-14!5;CL:0002028!4.78e-14!5;CL:0002591!3.87e-09!1;CL:0000163!5.02e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002591;1.81e-40;1!CL:0000039;1.21e-23;7!CL:0000586;1.21e-23;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.21e-40,1;CL:0000039,1.44e-23,7;CL:0000586,1.44e-23,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0009117;6.65e-17;10!UBERON:0005564;6.65e-17;10!UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease=DOID:178!1.05e-08!1;DOID:326!1.05e-08!1;DOID:3978!1.05e-08!1;DOID:3394!1.05e-08!1;DOID:5844!1.05e-08!1;DOID:8552!1.42e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.98e-08;22!DOID:2994;2.98e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0004145!2.67e-11!3;UBERON:0000941!3.31e-09!1;UBERON:0004904!3.31e-09!1;UBERON:0002464!3.31e-09!1;UBERON:0001021!3.31e-09!1;UBERON:0001785!3.31e-09!1;UBERON:0002134!4.52e-09!1;UBERON:0005208!4.52e-09!1;UBERON:0005946!4.52e-09!1;UBERON:0005965!4.52e-09!1;UBERON:0002078!4.52e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2!UBERON:0000078;5.15e-21;2!UBERON:0002012;5.15e-21;2!UBERON:0008886;5.15e-21;2!UBERON:0000473;7.72e-21;8!UBERON:0003135;1.81e-15;11!UBERON:0000991;1.34e-08;21!UBERON:0003101;2.98e-08;22!UBERON:0000079;2.98e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.91e-41,1;UBERON:0001785,9.91e-41,1;UBERON:0002464,9.91e-41,1;UBERON:0004904,9.91e-41,1;UBERON:0001021,9.91e-41,1;UBERON:0003902,9.91e-41,1;UBERON:0005425,9.91e-41,1;UBERON:0003714,3.81e-21,2;UBERON:0005162,3.81e-21,2;UBERON:0000122,3.81e-21,2;UBERON:0000078,5.70e-21,2;UBERON:0007497,5.70e-21,2;UBERON:0003643,5.70e-21,2;UBERON:0003504,5.70e-21,2;UBERON:0003469,5.70e-21,2;UBERON:0003496,5.70e-21,2;UBERON:0002012,5.70e-21,2;UBERON:0008886,5.70e-21,2;UBERON:0007303,5.70e-21,2;UBERON:0002061,5.70e-21,2;UBERON:0005432,5.70e-21,2;UBERON:0004363,5.70e-21,2;UBERON:0000473,8.98e-21,8;UBERON:0003135,2.02e-15,11;UBERON:0004145,1.83e-14,3;UBERON:0001781,2.80e-11,4;UBERON:0003498,3.22e-09,5;UBERON:0005985,3.22e-09,5;UBERON:0000991,1.42e-08,21;UBERON:0009196,1.42e-08,21;UBERON:0009117,1.42e-08,21;UBERON:0005564,1.42e-08,21;UBERON:0004176,3.15e-08,22;UBERON:0003101,3.15e-08,22;UBERON:0000079,3.15e-08,22;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0010188,6.78e-08,6;UBERON:0002539,6.78e-08,6;UBERON:0003351,6.78e-08,6;UBERON:0008816,6.78e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.621984346622316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1218771271618,0,3.21632148371957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:8780181..8780185,+ | |||
}} |
Latest revision as of 13:08, 24 July 2015
Short description: | p@chr12:8780181..8780185, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:8780181..8780185, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.21e-40 | 1 |
germ line cell | 1.44e-23 | 7 |
germ cell | 1.44e-23 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |