FFCP PHASE1:Hg19::chr13:110845203..110845217,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:110845203..110845217,+ | |||
|coexpression_cluster_id=C823 | |||
|description=CAGE_peak_at_chr13:110845203..110845217,+ | |||
|id=chr13:110845203..110845217,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.86e-11!119;CL:0000055!8.32e-11!180;CL:1000449!3.40e-09!16;CL:1000497!1.42e-07!18;CL:0002518!1.42e-07!18;CL:0000057!1.97e-07!75;CL:0000115!2.73e-07!35;CL:0000213!2.74e-07!57;CL:0000215!2.74e-07!57;CL:0002681!5.63e-07!13;CL:0002584!5.63e-07!13;CL:1000612!5.90e-07!7;CL:1000746!5.90e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.24e-15;15!CL:1000746;1.95e-14;7!CL:1000612;1.95e-14;7!CL:1000497;8.40e-13;17!CL:0002518;8.40e-13;17!CL:0002188;5.50e-11;5!CL:0000115;9.87e-11;36!CL:0002681;4.35e-10;12!CL:0002584;4.35e-10;12!CL:0000669;5.10e-09;4!CL:0002548;2.22e-08;6!CL:0000136;2.14e-07;13!CL:0002615;3.28e-07;3!CL:1000507;7.28e-07;10!CL:1000494;7.28e-07;10!CL:0000632;8.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,6.89e-15,15;CL:1000746,3.31e-14,7;CL:1000612,3.31e-14,7;CL:1000497,8.04e-13,17;CL:0002518,8.04e-13,17;CL:0000115,8.66e-12,36;CL:0002188,1.09e-10,5;CL:0002681,5.16e-10,12;CL:0002584,5.16e-10,12;CL:0000669,3.68e-09,4;CL:0002078,1.37e-08,45;CL:0002548,2.75e-08,6;CL:0000213,1.13e-07,58;CL:0000215,1.13e-07,58;CL:0002615,4.71e-07,3;CL:1000507,4.81e-07,10;CL:1000494,4.81e-07,10;CL:0000632,7.89e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.68e-13!118;UBERON:0002049!4.50e-11!79;UBERON:0007798!4.50e-11!79;UBERON:0004872!1.38e-09!84;UBERON:0006555!1.45e-09!17;UBERON:0005103!1.45e-09!17;UBERON:0000083!1.45e-09!17;UBERON:0009201!1.45e-09!17;UBERON:0004819!1.45e-09!17;UBERON:0006553!1.45e-09!17;UBERON:0003074!1.45e-09!17;UBERON:0003060!1.45e-09!17;UBERON:0001009!1.80e-09!113;UBERON:0004535!3.30e-09!110;UBERON:0004211!3.40e-09!16;UBERON:0001285!3.40e-09!16;UBERON:0007684!3.40e-09!16;UBERON:0003220!3.40e-09!16;UBERON:0004208!3.40e-09!16;UBERON:0000080!1.05e-08!18;UBERON:0002120!1.05e-08!18;UBERON:0004875!1.05e-08!18;UBERON:0005721!1.05e-08!18;UBERON:0005754!1.05e-08!18;UBERON:0007297!1.05e-08!18;UBERON:0003887!1.11e-08!21;UBERON:0000353!1.82e-08!17;UBERON:0000055!2.98e-08!69;UBERON:0000477!7.15e-08!286;UBERON:0004876!2.83e-07!20;UBERON:0001981!3.94e-07!60;UBERON:0007500!3.94e-07!60;UBERON:0004537!3.94e-07!60;UBERON:0006965!3.94e-07!60;UBERON:0001225!5.63e-07!13;UBERON:0008987!5.63e-07!13;UBERON:0000074!5.90e-07!7;UBERON:0001229!5.90e-07!7;UBERON:0001230!5.90e-07!7;UBERON:0005749!5.90e-07!7;UBERON:0004199!5.90e-07!7;UBERON:0004209!5.90e-07!7;UBERON:0004198!5.90e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.24e-15;15!UBERON:0004819;7.24e-15;15!UBERON:0001285;7.24e-15;15!UBERON:0007684;7.24e-15;15!UBERON:0000074;1.95e-14;7!UBERON:0001229;1.95e-14;7!UBERON:0000353;2.19e-12;15!UBERON:0001225;4.35e-10;12!UBERON:0008987;4.35e-10;12!UBERON:0002417;5.31e-09;58!UBERON:0000916;5.31e-09;58!UBERON:0002113;2.55e-08;24!UBERON:0011143;2.55e-08;24!UBERON:0001851;9.20e-08;15!UBERON:0005172;1.88e-07;52!UBERON:0005173;1.88e-07;52!UBERON:0005284;4.59e-07;5!UBERON:0004211;7.28e-07;10!UBERON:0009773;7.28e-07;10!UBERON:0001231;7.28e-07;10!UBERON:0004810;7.28e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,6.89e-15,15;UBERON:0009773,6.89e-15,15;UBERON:0001231,6.89e-15,15;UBERON:0001285,6.89e-15,15;UBERON:0007684,6.89e-15,15;UBERON:0004208,6.89e-15,15;UBERON:0010532,3.31e-14,7;UBERON:0000074,3.31e-14,7;UBERON:0001229,3.31e-14,7;UBERON:0001230,3.31e-14,7;UBERON:0003220,3.31e-14,7;UBERON:0005749,3.31e-14,7;UBERON:0004199,3.31e-14,7;UBERON:0004209,3.31e-14,7;UBERON:0004198,3.31e-14,7;UBERON:0003914,3.75e-14,117;UBERON:0006555,8.65e-14,16;UBERON:0004819,8.65e-14,16;UBERON:0002417,1.54e-13,60;UBERON:0000916,1.54e-13,60;UBERON:0005103,2.82e-12,8;UBERON:0000083,2.82e-12,8;UBERON:0009201,2.82e-12,8;UBERON:0006553,2.82e-12,8;UBERON:0003074,2.82e-12,8;UBERON:0003060,2.82e-12,8;UBERON:0000353,2.84e-12,15;UBERON:0000080,8.94e-11,9;UBERON:0002120,8.94e-11,9;UBERON:0004875,8.94e-11,9;UBERON:0005721,8.94e-11,9;UBERON:0005754,8.94e-11,9;UBERON:0007297,8.94e-11,9;UBERON:0005172,3.40e-10,54;UBERON:0005173,3.40e-10,54;UBERON:0001225,5.16e-10,12;UBERON:0008987,5.16e-10,12;UBERON:0003887,6.84e-10,12;UBERON:0003103,9.27e-09,68;UBERON:0004876,1.35e-08,11;UBERON:0004535,2.39e-08,109;UBERON:0001009,6.18e-08,112;UBERON:0001851,1.05e-07,15;UBERON:0002113,1.67e-07,26;UBERON:0003918,1.67e-07,26;UBERON:0011143,1.67e-07,26;UBERON:0005095,1.67e-07,26;UBERON:0007687,1.67e-07,26;UBERON:0000058,1.71e-07,19;UBERON:0002049,1.82e-07,78;UBERON:0007798,1.82e-07,78;UBERON:0005284,4.40e-07,5;UBERON:0009569,4.75e-07,112;UBERON:0004810,4.81e-07,10 | |||
|phase1_expression=0,1.49870366723688,1.12763523276777,3.00219895059391,5.81049422755474,6.10636966870258,10.1319951267324,0.631719873426831,2.87304191019822,0.737201809504527,2.09340350391728,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.408001382488506,0.626909442956176,0.85870796139317,0.410623275218653,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.30152611318355,0.722878304769133,0,0.434539556882471,0,0,0,1.10864698731282,0.87834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,1.67799774483962,2.20094433552054,0.208994966536811,1.8089173141853,0,0.66944122552934,5.23678112241891,0,10.2506064170231,0.735326160691737,8.91156142669936,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0,3.47880366186723,1.64619665163954,0.132409180813219,2.29469296599051,0.354668382198357,1.12135520028461,1.06748995729705,9.62003438826924,0,2.42479209725439,1.79808093424805,2.4217188423189,5.76175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0.919463387397059,1.50238058906597,3.40296549480063,0.717558542755448,0.640672166455702,0.211931901159562,0.300091096084402,0,1.28820270022815,0,0.168776332241266,0.974370051611986,1.00973509697646,0.184099797284599,0,0.710019185033229,0,0.339121184620975,0.57978255948989,0,0,0.365921118388786,0,0.464775771478074,0.310983165046111,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,2.21446636387394,4.20725321410337,1.2347220339942,1.47008711385542,0,0,0,0,0,0.514703430895577,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0.463721619900307,1.17408694235822,4.90845922387651,5.55582615091933,10.6542325251375,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.411309970813294,0.901029173531752,0,0.336393253036082,0.43596006883328,0.51336800074665,0.387815147273333,0,3.381211010224,3.19125739901845,1.04007436911366,0,0,0,3.14551586047925,0.542621605391443,0,2.28015329005615,3.19852753868291,3.16780749173372,0,0,0.399891964728228,0,0,0,3.35474797688216,3.44585807502342,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,3.32753378449291,1.07057393278297,2.68094105557689,0.35142424497814,0,0,0,0.664225598535437,0.184369168541703,0,2.74121620447837,5.83343820478455,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,0,2.41280881715411,2.96836132889982,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,1.20303882181971,0,0.34444334449382,0.910455840033585,0.655622074797121,0.902399225814824,1.61732207919271,1.56869953835371,4.38417673959782,2.95544560900052,5.68666920354483,2.2112181685947,1.0795795805107,6.16909010761157,1.62567862526312,3.01013864312912,0.509752546090077,0,0.895499018888713,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.308097234229289,0.614014698904518,0.413509717453592,0,0,0.340906509664404,0.445160178233687,0.165284915360978,0.384380134730212,0.255225424989168,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0.744316738719335,1.58189712359363,2.09693213316207,0,0,0,0,0.719489830333259,0.274537029736055,0.824686816419805,0,0,0.421258456238981,0,1.94970791705028,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0.6196469961995,1.69017361519345,0.286822704408103,0.785992328104969,0,0,0.211107635297664,0,0,0,0,0,0,0.847294206991012,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,0,0.0897576444097721,0,1.5950057986596,0.549585560411174,3.73124343213044,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,4.83962864194656,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.58186518546373,0.548167698587004,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,1.3749625440701,0,0.199679000498991,0.858452096273142,0,0.671834724867263,7.56629755439048,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.891727998294968,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0.979762080328227,0,0,0.170388021785422,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.235265819698172,0,0,0,0,0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| |||
|short_description=p@chr13:110845203..110845217,+ | |||
}} |
Latest revision as of 14:30, 24 July 2015
Short description: | p@chr13:110845203..110845217, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110845203..110845217, + |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 6.89e-15 | 15 |
glomerular cell | 3.31e-14 | 7 |
kidney corpuscule cell | 3.31e-14 | 7 |
kidney cell | 8.04e-13 | 17 |
kidney epithelial cell | 8.04e-13 | 17 |
endothelial cell | 8.66e-12 | 36 |
glomerular endothelial cell | 1.09e-10 | 5 |
kidney cortical cell | 5.16e-10 | 12 |
renal cortical epithelial cell | 5.16e-10 | 12 |
pericyte cell | 3.68e-09 | 4 |
meso-epithelial cell | 1.37e-08 | 45 |
cardiac fibroblast | 2.75e-08 | 6 |
lining cell | 1.13e-07 | 58 |
barrier cell | 1.13e-07 | 58 |
adipocyte of omentum tissue | 4.71e-07 | 3 |
kidney tubule cell | 4.81e-07 | 10 |
nephron tubule epithelial cell | 4.81e-07 | 10 |
hepatic stellate cell | 7.89e-07 | 3 |