FFCP PHASE1:Hg19::chr13:38143907..38143931,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:38143907..38143931,+ | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr13:38143907..38143931,+ | |||
|id=chr13:38143907..38143931,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.87e-22!75;CL:0000055!5.33e-21!180;CL:0002334!1.75e-17!12;CL:0000723!6.84e-10!436;CL:0000048!7.33e-10!430;CL:0000034!2.61e-09!444;CL:0002620!2.32e-08!23;CL:0000680!6.26e-08!57;CL:0000056!6.26e-08!57;CL:0000355!6.26e-08!57;CL:0002570!2.35e-07!8;CL:0002494!3.35e-07!16;CL:0000187!5.49e-07!54;CL:0002580!7.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.88e-28;12!CL:0002580;1.28e-17;3!CL:0002579;3.81e-17;3!CL:0000197;7.89e-09;6!CL:0000098;7.89e-09;6!CL:0002167;7.89e-09;6!CL:0000135;2.69e-08;3!CL:0000388;2.69e-08;3!CL:0002557;7.77e-07;1!CL:0002568;7.77e-07;1!CL:0002570;9.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.65e-29,12;CL:0002580,5.80e-18,3;CL:0002579,1.91e-17,3;CL:0000057,1.97e-11,76;CL:0000197,6.28e-09,6;CL:0000098,6.28e-09,6;CL:0002167,6.28e-09,6;CL:0000135,1.86e-08,3;CL:0000388,1.86e-08,3;CL:0002557,5.37e-07,1;CL:0002568,8.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.16e-07;1!UBERON:0003099;7.77e-07;1!UBERON:0003852;7.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;1.20e-08;3!DOID:3369;2.22e-07;1!DOID:4235;7.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.02e-08,3;DOID:3369,2.22e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.64e-07!61;UBERON:0002036!4.64e-07!61;UBERON:0003082!4.64e-07!61;UBERON:0000914!7.66e-07!83;UBERON:0002329!7.66e-07!83;UBERON:0003077!7.66e-07!83;UBERON:0003059!7.66e-07!83;UBERON:0007282!7.66e-07!83;UBERON:0009618!7.66e-07!83;UBERON:0007285!7.66e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.89e-09;6!UBERON:0002358;7.89e-09;6!UBERON:0003684;7.89e-09;6!UBERON:0001178;7.89e-09;6!UBERON:0007846;2.69e-08;3!UBERON:0000043;2.69e-08;3!UBERON:0007845;2.69e-08;3!UBERON:0003104;1.24e-07;7!UBERON:0009142;1.24e-07;7!UBERON:0005705;7.77e-07;1!UBERON:0008193;7.77e-07;1!UBERON:0010912;7.77e-07;1!UBERON:0002514;7.77e-07;1!UBERON:0003457;7.77e-07;1!UBERON:0008907;7.77e-07;1!UBERON:0008001;7.77e-07;1!UBERON:0007213;7.77e-07;1!UBERON:0009891;7.77e-07;1!UBERON:0007914;7.77e-07;1!UBERON:0007375;7.77e-07;1!UBERON:0003323;7.77e-07;1!UBERON:0010258;7.77e-07;1!UBERON:0005253;7.77e-07;1!UBERON:0007842;7.77e-07;1!UBERON:0002397;7.77e-07;1!UBERON:0003113;7.77e-07;1!UBERON:0003277;7.77e-07;1!UBERON:0001709;7.77e-07;1!UBERON:0002244;7.77e-07;1!UBERON:0005620;7.77e-07;1!UBERON:0010364;7.77e-07;1!UBERON:0004288;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.63e-09,6;UBERON:0002358,5.63e-09,6;UBERON:0003684,5.63e-09,6;UBERON:0001178,5.63e-09,6;UBERON:0007846,1.86e-08,3;UBERON:0000043,1.86e-08,3;UBERON:0007845,1.86e-08,3;UBERON:0005705,4.78e-07,1;UBERON:0008193,4.78e-07,1;UBERON:0010912,4.78e-07,1;UBERON:0002514,4.78e-07,1;UBERON:0003457,4.78e-07,1;UBERON:0008907,4.78e-07,1;UBERON:0008001,4.78e-07,1;UBERON:0007213,4.78e-07,1;UBERON:0009891,4.78e-07,1;UBERON:0007914,4.78e-07,1;UBERON:0009292,4.78e-07,1;UBERON:0003099,4.78e-07,1;UBERON:0007375,4.78e-07,1;UBERON:0003323,4.78e-07,1;UBERON:0010258,4.78e-07,1;UBERON:0007842,4.78e-07,1;UBERON:0009494,4.78e-07,1;UBERON:0010042,4.78e-07,1;UBERON:0010045,4.78e-07,1;UBERON:0010259,4.78e-07,1;UBERON:0010359,4.78e-07,1;UBERON:0009526,4.78e-07,1;UBERON:0002397,4.78e-07,1;UBERON:0003113,4.78e-07,1;UBERON:0003277,4.78e-07,1;UBERON:0001709,4.78e-07,1;UBERON:0004066,4.78e-07,1;UBERON:0002244,4.78e-07,1;UBERON:0005620,4.78e-07,1;UBERON:0004362,4.78e-07,1;UBERON:0010364,4.78e-07,1;UBERON:0010046,4.78e-07,1;UBERON:0005868,4.78e-07,1;UBERON:0007238,4.78e-07,1;UBERON:0004288,4.78e-07,1;UBERON:0004068,4.78e-07,1;UBERON:0010334,4.78e-07,1;UBERON:0003852,4.78e-07,1;UBERON:0010253,4.78e-07,1 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,2.89151321907653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,2.43042584364528,0,0,0,0,0,0.183201743930407,0,0,0,4.47274756525787,0.759783069987479,0.926864265692532,0.860509862246441,0,0,1.06748995729705,0.74000264525148,0,0.538842688278752,1.14423332179421,0.151357427644931,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,1.70148274740032,0.358779271377724,1.06778694409284,0.423863802319124,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.504867548488229,0.920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0.65147236858747,0.355391948742546,0,15.0719688529793,0,2.69927076191554,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,1.78428988797162,1.10391690523754,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,3.2254015016441,1.38115775959256,1.96462066103151,1.79394808957981,1.02341449813341,1.93024705372329,0,0.616838775210622,1.24293207719189,0.492762936082855,1.55776328755086,0.929683027679674,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,3.29418531892928,0.330569830721956,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0,0.731140468893853,0,0.818999468447914,2.12108147930569,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.10961172300523,0,0.251567901752575,0,0.457680136793847,0,0.310874401165561,0,0,0.449803112163605,0.310525913752519,0,0.797525143673985,0,0.901545653983311,3.04644169735036,0,0,0.429642228169954,0,0.398095888698616,0,1.37358282073117,1.01024846629776,0,0,0,0,1.13352962756136,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,1.73050624849516,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p@chr13:38143907..38143931,+ | |||
}} |
Latest revision as of 15:52, 24 July 2015
Short description: | p@chr13:38143907..38143931, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38143907..38143931, + |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.65e-29 | 12 |
preadipocyte of the breast | 5.80e-18 | 3 |
omentum preadipocyte | 1.91e-17 | 3 |
fibroblast | 1.97e-11 | 76 |
receptor cell | 6.28e-09 | 6 |
sensory epithelial cell | 6.28e-09 | 6 |
olfactory epithelial cell | 6.28e-09 | 6 |
fibrocyte | 1.86e-08 | 3 |
tendon cell | 1.86e-08 | 3 |
fibroblast of pulmonary artery | 5.37e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.02e-08 | 3 |
peripheral primitive neuroectodermal tumor | 2.22e-07 | 1 |