FFCP PHASE1:Hg19::chr13:38161054..38161069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38161054..38161069,- | |||
|coexpression_cluster_id=C349 | |coexpression_cluster_id=C349 | ||
|description=CAGE_peak_at_chr13:38161054..38161069,- | |description=CAGE_peak_at_chr13:38161054..38161069,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.27e-24!180;CL:0000057!2.20e-15!75;CL:0000680!1.85e-12!57;CL:0000056!1.85e-12!57;CL:0000355!1.85e-12!57;CL:0002334!6.15e-12!12;CL:0000187!6.58e-12!54;CL:0002494!3.14e-10!16;CL:0000183!4.81e-10!59;CL:0000393!1.03e-09!60;CL:0000211!1.03e-09!60;CL:0000048!5.01e-09!430;CL:0000723!1.87e-08!436;CL:0000034!5.15e-08!444;CL:0000222!8.61e-08!119;CL:0000192!6.37e-07!42;CL:0000514!6.37e-07!42;CL:0002548!8.57e-07!6 | |ontology_enrichment_celltype=CL:0000055!2.27e-24!180;CL:0000057!2.20e-15!75;CL:0000680!1.85e-12!57;CL:0000056!1.85e-12!57;CL:0000355!1.85e-12!57;CL:0002334!6.15e-12!12;CL:0000187!6.58e-12!54;CL:0002494!3.14e-10!16;CL:0000183!4.81e-10!59;CL:0000393!1.03e-09!60;CL:0000211!1.03e-09!60;CL:0000048!5.01e-09!430;CL:0000723!1.87e-08!436;CL:0000034!5.15e-08!444;CL:0000222!8.61e-08!119;CL:0000192!6.37e-07!42;CL:0000514!6.37e-07!42;CL:0002548!8.57e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.41e-11;12!CL:0002580;8.83e-08;3!CL:0002570;6.37e-07;8 | |ontology_enrichment_celltype_v019=CL:0002334;3.41e-11;12!CL:0002580;8.83e-08;3!CL:0002570;6.37e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.73e-11,12;CL:0000057,1.03e-10,76;CL:0002580,9.94e-08,3;CL:0002570,6.82e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!5.56e-08!14 | |ontology_enrichment_disease=DOID:2394!5.56e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.14e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;4.14e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.66e-13!61;UBERON:0002036!3.66e-13!61;UBERON:0003082!3.66e-13!61;UBERON:0002385!2.25e-12!63;UBERON:0001015!2.25e-12!63;UBERON:0000383!2.25e-12!63;UBERON:0004872!5.80e-11!84;UBERON:0000914!1.61e-10!83;UBERON:0002329!1.61e-10!83;UBERON:0003077!1.61e-10!83;UBERON:0003059!1.61e-10!83;UBERON:0007282!1.61e-10!83;UBERON:0009618!1.61e-10!83;UBERON:0007285!1.61e-10!83;UBERON:0004290!5.15e-10!70;UBERON:0000948!1.10e-09!24;UBERON:0005498!1.10e-09!24;UBERON:0004140!1.10e-09!24;UBERON:0009881!1.10e-09!24;UBERON:0004141!1.10e-09!24;UBERON:0003084!1.10e-09!24;UBERON:0007005!1.10e-09!24;UBERON:0004139!1.10e-09!24;UBERON:0004291!1.10e-09!24;UBERON:0001637!1.42e-09!42;UBERON:0003509!1.42e-09!42;UBERON:0004572!1.42e-09!42;UBERON:0007100!6.43e-09!27;UBERON:0000490!3.66e-08!138;UBERON:0000486!4.33e-08!82;UBERON:0004573!7.93e-08!33;UBERON:0004571!7.93e-08!33;UBERON:0005256!8.49e-08!143;UBERON:0003914!5.31e-07!118;UBERON:0004535!5.60e-07!110;UBERON:0001009!6.73e-07!113 | |ontology_enrichment_uberon=UBERON:0001134!3.66e-13!61;UBERON:0002036!3.66e-13!61;UBERON:0003082!3.66e-13!61;UBERON:0002385!2.25e-12!63;UBERON:0001015!2.25e-12!63;UBERON:0000383!2.25e-12!63;UBERON:0004872!5.80e-11!84;UBERON:0000914!1.61e-10!83;UBERON:0002329!1.61e-10!83;UBERON:0003077!1.61e-10!83;UBERON:0003059!1.61e-10!83;UBERON:0007282!1.61e-10!83;UBERON:0009618!1.61e-10!83;UBERON:0007285!1.61e-10!83;UBERON:0004290!5.15e-10!70;UBERON:0000948!1.10e-09!24;UBERON:0005498!1.10e-09!24;UBERON:0004140!1.10e-09!24;UBERON:0009881!1.10e-09!24;UBERON:0004141!1.10e-09!24;UBERON:0003084!1.10e-09!24;UBERON:0007005!1.10e-09!24;UBERON:0004139!1.10e-09!24;UBERON:0004291!1.10e-09!24;UBERON:0001637!1.42e-09!42;UBERON:0003509!1.42e-09!42;UBERON:0004572!1.42e-09!42;UBERON:0007100!6.43e-09!27;UBERON:0000490!3.66e-08!138;UBERON:0000486!4.33e-08!82;UBERON:0004573!7.93e-08!33;UBERON:0004571!7.93e-08!33;UBERON:0005256!8.49e-08!143;UBERON:0003914!5.31e-07!118;UBERON:0004535!5.60e-07!110;UBERON:0001009!6.73e-07!113 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.43e-08,62;UBERON:0002036,5.43e-08,62;UBERON:0003082,5.43e-08,62;UBERON:0002385,1.33e-07,64;UBERON:0001015,1.33e-07,64;UBERON:0000383,1.33e-07,64;UBERON:0007524,5.54e-07,73 | |||
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|short_description=p@chr13:38161054..38161069,- | |short_description=p@chr13:38161054..38161069,- | ||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38161054..38161069, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38161054..38161069, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.73e-11 | 12 |
fibroblast | 1.03e-10 | 76 |
preadipocyte of the breast | 9.94e-08 | 3 |
mesenchymal stem cell of adipose | 6.82e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.43e-08 | 62 |
striated muscle tissue | 5.43e-08 | 62 |
myotome | 5.43e-08 | 62 |
muscle tissue | 1.33e-07 | 64 |
musculature | 1.33e-07 | 64 |
musculature of body | 1.33e-07 | 64 |
dense mesenchyme tissue | 5.54e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.83e-07 | 14 |