FFCP PHASE1:Hg19::chr14:57280023..57280057,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000554358_5end | |association_with_transcript=14bp_to_ENST00000554358_5end | ||
|cluster_id=chr14:57280023..57280057,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_ENST00000554358_5end | |description=CAGE_peak_1_at_ENST00000554358_5end | ||
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|ontology_enrichment_celltype=CL:0002322!2.62e-17!5;CL:0002586!3.29e-12!3;CL:0000149!2.96e-09!4;CL:0000147!6.02e-09!14;CL:0002549!3.48e-08!2;CL:0000128!4.01e-08!7;CL:0000126!4.01e-08!7;CL:0000127!4.01e-08!7;CL:0002453!4.01e-08!7;CL:0000333!5.97e-08!41;CL:0000243!4.15e-07!15;CL:0000125!4.15e-07!15;CL:0000030!4.15e-07!15;CL:0000339!4.15e-07!15 | |ontology_enrichment_celltype=CL:0002322!2.62e-17!5;CL:0002586!3.29e-12!3;CL:0000149!2.96e-09!4;CL:0000147!6.02e-09!14;CL:0002549!3.48e-08!2;CL:0000128!4.01e-08!7;CL:0000126!4.01e-08!7;CL:0000127!4.01e-08!7;CL:0002453!4.01e-08!7;CL:0000333!5.97e-08!41;CL:0000243!4.15e-07!15;CL:0000125!4.15e-07!15;CL:0000030!4.15e-07!15;CL:0000339!4.15e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002586;2.61e-22;3!CL:0000149;6.92e-17;4!CL:0000147;2.29e-08;14 | |ontology_enrichment_celltype_v019=CL:0002586;2.61e-22;3!CL:0000149;6.92e-17;4!CL:0000147;2.29e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.81e-22,3;CL:0000149,7.31e-17,4;CL:0000147,2.48e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.49e-11;3!UBERON:0006222;3.05e-08;1!UBERON:0006601;9.69e-08;82 | |ontology_enrichment_development_v019=UBERON:0003056;7.49e-11;3!UBERON:0006222;3.05e-08;1!UBERON:0006601;9.69e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;7.82e-12;10!DOID:3095;3.84e-08;22!DOID:2994;3.84e-08;22 | |ontology_enrichment_disease_v019=DOID:171;7.82e-12;10!DOID:3095;3.84e-08;22!DOID:2994;3.84e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,7.93e-12,10;DOID:3095,3.87e-08,22;DOID:2994,3.87e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.74e-42!94;UBERON:0001016!2.74e-42!94;UBERON:0005743!8.16e-42!86;UBERON:0002346!3.21e-35!90;UBERON:0000955!3.26e-35!69;UBERON:0006238!3.26e-35!69;UBERON:0002616!1.20e-33!59;UBERON:0001017!2.96e-33!82;UBERON:0003075!4.44e-32!86;UBERON:0007284!4.44e-32!86;UBERON:0001049!2.33e-29!57;UBERON:0005068!2.33e-29!57;UBERON:0006241!2.33e-29!57;UBERON:0007135!2.33e-29!57;UBERON:0000033!5.58e-25!123;UBERON:0003056!6.70e-25!61;UBERON:0000924!1.59e-23!173;UBERON:0006601!1.59e-23!173;UBERON:0000153!1.90e-23!129;UBERON:0007811!1.90e-23!129;UBERON:0004121!3.39e-21!169;UBERON:0002780!2.65e-20!41;UBERON:0001890!2.65e-20!41;UBERON:0006240!2.65e-20!41;UBERON:0003080!9.82e-20!42;UBERON:0000966!2.25e-19!5;UBERON:0005388!2.25e-19!5;UBERON:0001802!2.25e-19!5;UBERON:0001894!5.08e-19!7;UBERON:0006222!5.08e-19!7;UBERON:0004733!6.40e-14!12;UBERON:0002028!6.40e-14!12;UBERON:0007277!6.40e-14!12;UBERON:0004732!9.03e-13!13;UBERON:0001781!3.29e-12!3;UBERON:0001782!3.29e-12!3;UBERON:0005424!3.29e-12!3;UBERON:0001896!4.76e-12!3;UBERON:0005290!4.76e-12!3;UBERON:0010096!4.76e-12!3;UBERON:0002298!1.93e-11!8;UBERON:0003076!6.24e-11!15;UBERON:0003057!6.24e-11!15;UBERON:0001893!1.15e-09!34;UBERON:0007023!1.28e-09!115;UBERON:0003296!2.96e-09!4;UBERON:0010133!2.96e-09!4;UBERON:0001905!4.47e-09!2;UBERON:0002757!4.47e-09!2;UBERON:0010134!4.47e-09!2;UBERON:0002784!4.47e-09!2;UBERON:0005408!4.47e-09!2;UBERON:0001899!4.47e-09!2;UBERON:0001897!1.74e-08!2;UBERON:0000970!2.77e-08!20;UBERON:0002791!2.86e-08!33;UBERON:0003947!3.48e-08!2;UBERON:0005629!3.48e-08!2;UBERON:0005358!3.48e-08!2;UBERON:0001886!3.48e-08!2;UBERON:0004086!3.48e-08!2;UBERON:0005282!3.48e-08!2;UBERON:0005281!3.48e-08!2;UBERON:0001954!7.10e-08!2;UBERON:0003022!7.10e-08!2;UBERON:0002421!7.10e-08!2;UBERON:0002600!7.10e-08!2;UBERON:0002104!7.72e-08!21;UBERON:0000020!4.57e-07!23;UBERON:0001869!9.44e-07!32;UBERON:0001032!9.94e-07!24;UBERON:0004456!9.94e-07!24 | |ontology_enrichment_uberon=UBERON:0000073!2.74e-42!94;UBERON:0001016!2.74e-42!94;UBERON:0005743!8.16e-42!86;UBERON:0002346!3.21e-35!90;UBERON:0000955!3.26e-35!69;UBERON:0006238!3.26e-35!69;UBERON:0002616!1.20e-33!59;UBERON:0001017!2.96e-33!82;UBERON:0003075!4.44e-32!86;UBERON:0007284!4.44e-32!86;UBERON:0001049!2.33e-29!57;UBERON:0005068!2.33e-29!57;UBERON:0006241!2.33e-29!57;UBERON:0007135!2.33e-29!57;UBERON:0000033!5.58e-25!123;UBERON:0003056!6.70e-25!61;UBERON:0000924!1.59e-23!173;UBERON:0006601!1.59e-23!173;UBERON:0000153!1.90e-23!129;UBERON:0007811!1.90e-23!129;UBERON:0004121!3.39e-21!169;UBERON:0002780!2.65e-20!41;UBERON:0001890!2.65e-20!41;UBERON:0006240!2.65e-20!41;UBERON:0003080!9.82e-20!42;UBERON:0000966!2.25e-19!5;UBERON:0005388!2.25e-19!5;UBERON:0001802!2.25e-19!5;UBERON:0001894!5.08e-19!7;UBERON:0006222!5.08e-19!7;UBERON:0004733!6.40e-14!12;UBERON:0002028!6.40e-14!12;UBERON:0007277!6.40e-14!12;UBERON:0004732!9.03e-13!13;UBERON:0001781!3.29e-12!3;UBERON:0001782!3.29e-12!3;UBERON:0005424!3.29e-12!3;UBERON:0001896!4.76e-12!3;UBERON:0005290!4.76e-12!3;UBERON:0010096!4.76e-12!3;UBERON:0002298!1.93e-11!8;UBERON:0003076!6.24e-11!15;UBERON:0003057!6.24e-11!15;UBERON:0001893!1.15e-09!34;UBERON:0007023!1.28e-09!115;UBERON:0003296!2.96e-09!4;UBERON:0010133!2.96e-09!4;UBERON:0001905!4.47e-09!2;UBERON:0002757!4.47e-09!2;UBERON:0010134!4.47e-09!2;UBERON:0002784!4.47e-09!2;UBERON:0005408!4.47e-09!2;UBERON:0001899!4.47e-09!2;UBERON:0001897!1.74e-08!2;UBERON:0000970!2.77e-08!20;UBERON:0002791!2.86e-08!33;UBERON:0003947!3.48e-08!2;UBERON:0005629!3.48e-08!2;UBERON:0005358!3.48e-08!2;UBERON:0001886!3.48e-08!2;UBERON:0004086!3.48e-08!2;UBERON:0005282!3.48e-08!2;UBERON:0005281!3.48e-08!2;UBERON:0001954!7.10e-08!2;UBERON:0003022!7.10e-08!2;UBERON:0002421!7.10e-08!2;UBERON:0002600!7.10e-08!2;UBERON:0002104!7.72e-08!21;UBERON:0000020!4.57e-07!23;UBERON:0001869!9.44e-07!32;UBERON:0001032!9.94e-07!24;UBERON:0004456!9.94e-07!24 | ||
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|short_description=p1@ENST00000554358 | |short_description=p1@ENST00000554358 | ||
}} | }} |
Latest revision as of 21:23, 24 July 2015
Short description: | p1@ENST00000554358 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554358_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 14bp_to_ENST00000554358_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.81e-22 | 3 |
visual pigment cell | 7.31e-17 | 4 |
pigment cell | 2.48e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.93e-12 | 10 |
germ cell and embryonal cancer | 3.87e-08 | 22 |
germ cell cancer | 3.87e-08 | 22 |