FFCP PHASE1:Hg19::chr14:62204889..62204963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:62204889..62204963,+ | |||
|coexpression_cluster_id=C832 | |||
|description=CAGE_peak_at_chr14:62204889..62204963,+ | |description=CAGE_peak_at_chr14:62204889..62204963,+ | ||
|id=chr14:62204889..62204963,+ | |id=chr14:62204889..62204963,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.65e-13!42;CL:0000860!2.74e-13!45;CL:0002194!7.95e-12!63;CL:0000576!7.95e-12!63;CL:0000040!7.95e-12!63;CL:0000559!7.95e-12!63;CL:0000766!9.21e-11!76;CL:0002009!1.00e-10!65;CL:0000839!4.82e-10!70;CL:0000012!9.07e-10!682;CL:0000548!1.48e-09!679;CL:0000004!1.48e-09!679;CL:0000255!1.48e-09!679;CL:0000557!1.91e-09!71;CL:0000048!8.72e-09!430;CL:0000723!1.55e-08!436;CL:0000034!1.98e-08!444;CL:0000144!4.90e-08!625;CL:0000055!5.92e-07!180;CL:0002371!9.30e-07!591 | |ontology_enrichment_celltype=CL:0002057!1.65e-13!42;CL:0000860!2.74e-13!45;CL:0002194!7.95e-12!63;CL:0000576!7.95e-12!63;CL:0000040!7.95e-12!63;CL:0000559!7.95e-12!63;CL:0000766!9.21e-11!76;CL:0002009!1.00e-10!65;CL:0000839!4.82e-10!70;CL:0000012!9.07e-10!682;CL:0000548!1.48e-09!679;CL:0000004!1.48e-09!679;CL:0000255!1.48e-09!679;CL:0000557!1.91e-09!71;CL:0000048!8.72e-09!430;CL:0000723!1.55e-08!436;CL:0000034!1.98e-08!444;CL:0000144!4.90e-08!625;CL:0000055!5.92e-07!180;CL:0002371!9.30e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-16;33!CL:0002057;1.83e-16;33!CL:0000473;5.86e-13;39!CL:0000234;5.86e-13;39!CL:0000576;5.99e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.05e-15,42;CL:0002057,3.05e-15,42;CL:0000048,6.45e-15,427;CL:0000473,8.75e-15,48;CL:0000234,8.75e-15,48;CL:0000723,2.36e-14,433;CL:0000034,1.03e-13,441;CL:0002320,1.55e-10,361;CL:0002194,1.96e-10,59;CL:0000576,1.96e-10,59;CL:0000040,1.96e-10,59;CL:0000559,1.96e-10,59;CL:0000134,4.71e-10,354;CL:0002009,1.19e-09,61;CL:0000766,2.02e-09,72;CL:0000839,1.20e-08,66;CL:0000557,2.53e-08,67;CL:0000057,1.07e-07,76;CL:0000219,5.09e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.73e-11!167;UBERON:0002371!1.54e-08!80;UBERON:0004765!2.81e-08!101;UBERON:0001434!2.81e-08!101;UBERON:0001474!6.98e-08!86;UBERON:0000468!2.64e-07!659;UBERON:0000926!9.31e-07!448;UBERON:0004120!9.31e-07!448;UBERON:0006603!9.31e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.34e-12,167;UBERON:0002384,6.02e-11,371;UBERON:0000926,3.24e-10,315;UBERON:0004120,3.24e-10,315;UBERON:0006603,3.24e-10,315;UBERON:0001434,5.49e-08,100;UBERON:0002371,6.04e-08,76;UBERON:0004765,9.93e-08,90;UBERON:0001474,5.73e-07,82 | |||
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| ||
|short_description=p@chr14:62204889..62204963,+ | |short_description=p@chr14:62204889..62204963,+ | ||
}} | }} |
Latest revision as of 21:44, 24 July 2015
Short description: | p@chr14:62204889..62204963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:62204889..62204963, + |
Coexpression cluster: | C832_Neutrophils_CD14_Preadipocyte_Olfactory_tenocyte_mixed_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.05e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-15 | 42 |
multi fate stem cell | 6.45e-15 | 427 |
defensive cell | 8.75e-15 | 48 |
phagocyte | 8.75e-15 | 48 |
somatic stem cell | 2.36e-14 | 433 |
stem cell | 1.03e-13 | 441 |
connective tissue cell | 1.55e-10 | 361 |
monopoietic cell | 1.96e-10 | 59 |
monocyte | 1.96e-10 | 59 |
monoblast | 1.96e-10 | 59 |
promonocyte | 1.96e-10 | 59 |
mesenchymal cell | 4.71e-10 | 354 |
macrophage dendritic cell progenitor | 1.19e-09 | 61 |
myeloid leukocyte | 2.02e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.20e-08 | 66 |
granulocyte monocyte progenitor cell | 2.53e-08 | 67 |
fibroblast | 1.07e-07 | 76 |
motile cell | 5.09e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.34e-12 | 167 |
connective tissue | 6.02e-11 | 371 |
mesoderm | 3.24e-10 | 315 |
mesoderm-derived structure | 3.24e-10 | 315 |
presumptive mesoderm | 3.24e-10 | 315 |
skeletal system | 5.49e-08 | 100 |
bone marrow | 6.04e-08 | 76 |
skeletal element | 9.93e-08 | 90 |
bone element | 5.73e-07 | 82 |