FFCP PHASE1:Hg19::chr15:35084289..35084305,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:35084289..35084305,+
|short_description=p@chr15:35084289..35084305,+
|description=CAGE_peak_at_chr15:35084289..35084305,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:35084289..35084305,+ | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_at_chr15:35084289..35084305,+ | |||
|id=chr15:35084289..35084305,+ | |||
|ontology_enrichment_celltype=CL:0000188!5.22e-15!9;CL:0000515!5.30e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000188;3.28e-12;9!CL:0002575;3.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.14e-12,9;CL:0002575,3.09e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.61e-13;1!UBERON:0004140;1.82e-13;1!UBERON:0000358;2.62e-13;1!UBERON:0010226;3.33e-13;1!UBERON:0005062;1.86e-12;4!UBERON:0007284;1.86e-12;4 | |||
|ontology_enrichment_disease=DOID:114!4.53e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.34e-24;2!DOID:178;4.49e-13;1!DOID:326;4.49e-13;1!DOID:3978;4.49e-13;1!DOID:3394;4.49e-13;1!DOID:5844;4.49e-13;1!DOID:1287;1.10e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.34e-24,2;DOID:178,4.23e-13,1;DOID:326,4.23e-13,1;DOID:3978,4.23e-13,1;DOID:3394,4.23e-13,1;DOID:5844,4.23e-13,1;DOID:1287,1.10e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.45e-08!27;UBERON:0003127!5.84e-08!2;UBERON:0003103!1.38e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.96e-22;25!UBERON:0004151;5.74e-17;3!UBERON:0003978;2.78e-16;3!UBERON:0000946;2.78e-16;3!UBERON:0002079;1.61e-13;1!UBERON:0000948;2.29e-13;22!UBERON:0002084;3.33e-13;1!UBERON:0002082;3.33e-13;1!UBERON:0002135;7.68e-13;1!UBERON:0002146;7.68e-13;1!UBERON:0005623;7.68e-13;1!UBERON:0001134;5.60e-12;16!UBERON:0002036;5.60e-12;16!UBERON:0002385;5.02e-09;31!UBERON:0001015;5.02e-09;31!UBERON:0000383;5.02e-09;31!UBERON:0002081;2.15e-07;2!UBERON:0000341;4.69e-07;2!UBERON:0002133;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.82e-21,27;UBERON:0004151,5.30e-17,3;UBERON:0003978,3.01e-16,3;UBERON:0009751,3.01e-16,3;UBERON:0000946,3.01e-16,3;UBERON:0002523,3.01e-16,3;UBERON:0005983,3.01e-16,3;UBERON:0002165,3.01e-16,3;UBERON:0002062,3.01e-16,3;UBERON:0007280,3.01e-16,3;UBERON:0002079,1.61e-13,1;UBERON:0002084,2.95e-13,1;UBERON:0002082,2.95e-13,1;UBERON:0010226,2.95e-13,1;UBERON:0002146,7.68e-13,1;UBERON:0005623,7.68e-13,1;UBERON:0002135,8.64e-13,1;UBERON:0000948,3.01e-12,24;UBERON:0005498,3.01e-12,24;UBERON:0004140,3.01e-12,24;UBERON:0009881,3.01e-12,24;UBERON:0004141,3.01e-12,24;UBERON:0003084,3.01e-12,24;UBERON:0007005,3.01e-12,24;UBERON:0004139,3.01e-12,24;UBERON:0004291,3.01e-12,24;UBERON:0003103,7.21e-08,68;UBERON:0004797,1.74e-07,7;UBERON:0002081,2.15e-07,2;UBERON:0010227,2.15e-07,2;UBERON:0000341,4.42e-07,2;UBERON:0002133,4.98e-07,2 | |||
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| ||
|short_description=p@chr15:35084289..35084305,+ | |||
}} | }} |
Latest revision as of 01:00, 25 July 2015
Short description: | p@chr15:35084289..35084305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:35084289..35084305, + |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.14e-12 | 9 |
central nervous system pericyte | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.82e-21 | 27 |
cardiac chamber | 5.30e-17 | 3 |
valve | 3.01e-16 | 3 |
cardiac mesenchyme | 3.01e-16 | 3 |
cardial valve | 3.01e-16 | 3 |
tunica intima | 3.01e-16 | 3 |
heart layer | 3.01e-16 | 3 |
endocardium | 3.01e-16 | 3 |
endocardial cushion | 3.01e-16 | 3 |
presumptive endocardium | 3.01e-16 | 3 |
left cardiac atrium | 1.61e-13 | 1 |
heart left ventricle | 2.95e-13 | 1 |
cardiac ventricle | 2.95e-13 | 1 |
future cardiac ventricle | 2.95e-13 | 1 |
pulmonary valve | 7.68e-13 | 1 |
semi-lunar valve | 7.68e-13 | 1 |
mitral valve | 8.64e-13 | 1 |
heart | 3.01e-12 | 24 |
primitive heart tube | 3.01e-12 | 24 |
primary heart field | 3.01e-12 | 24 |
anterior lateral plate mesoderm | 3.01e-12 | 24 |
heart tube | 3.01e-12 | 24 |
heart primordium | 3.01e-12 | 24 |
cardiac mesoderm | 3.01e-12 | 24 |
cardiogenic plate | 3.01e-12 | 24 |
heart rudiment | 3.01e-12 | 24 |
compound organ | 7.21e-08 | 68 |
blood vessel layer | 1.74e-07 | 7 |
cardiac atrium | 2.15e-07 | 2 |
future cardiac atrium | 2.15e-07 | 2 |
throat | 4.42e-07 | 2 |
atrioventricular valve | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.34e-24 | 2 |
vascular disease | 4.23e-13 | 1 |
ischemia | 4.23e-13 | 1 |
extrinsic cardiomyopathy | 4.23e-13 | 1 |
myocardial ischemia | 4.23e-13 | 1 |
myocardial infarction | 4.23e-13 | 1 |
cardiovascular system disease | 1.10e-12 | 4 |