FFCP PHASE1:Hg19::chr15:35085699..35085713,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:35085699..35085713,- to FFCP PHASE1:Hg19::chr15:35085699..35085713,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:35085699..35085713,- | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_at_chr15:35085699..35085713,- | |||
|id=chr15:35085699..35085713,- | |||
|ontology_enrichment_celltype=CL:0000188!2.38e-21!9;CL:0000515!3.45e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.44e-09;2!CL:0002615;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.57e-09,2;CL:0002615,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.44e-18;1!UBERON:0010227;8.72e-18;1!UBERON:0004140;8.72e-18;1!UBERON:0005062;1.51e-17;4!UBERON:0007284;1.51e-17;4 | |||
|ontology_enrichment_disease=DOID:114!7.37e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.07e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.12e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!9.96e-10!2;UBERON:0007100!2.39e-09!27;UBERON:0002385!2.93e-08!63;UBERON:0001015!2.93e-08!63;UBERON:0000383!2.93e-08!63;UBERON:0007023!1.27e-07!115;UBERON:0001134!2.91e-07!61;UBERON:0002036!2.91e-07!61;UBERON:0003082!2.91e-07!61;UBERON:0004151!5.44e-07!3;UBERON:0003978!5.94e-07!3;UBERON:0009751!5.94e-07!3;UBERON:0000946!5.94e-07!3;UBERON:0002523!5.94e-07!3;UBERON:0005983!5.94e-07!3;UBERON:0002165!5.94e-07!3;UBERON:0002062!5.94e-07!3;UBERON:0007280!5.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.27e-32;25!UBERON:0004151;3.89e-23;3!UBERON:0003978;4.87e-23;3!UBERON:0000946;4.87e-23;3!UBERON:0000948;6.98e-19;22!UBERON:0002084;3.44e-18;1!UBERON:0002082;3.44e-18;1!UBERON:0002146;4.83e-18;1!UBERON:0005623;4.83e-18;1!UBERON:0002079;8.72e-18;1!UBERON:0002135;8.72e-18;1!UBERON:0002081;1.44e-09;2!UBERON:0002133;1.44e-09;2!UBERON:0010313;1.40e-07;10!UBERON:0003103;5.79e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.25e-30,27;UBERON:0004151,3.29e-23,3;UBERON:0003978,4.61e-23,3;UBERON:0009751,4.61e-23,3;UBERON:0000946,4.61e-23,3;UBERON:0002523,4.61e-23,3;UBERON:0005983,4.61e-23,3;UBERON:0002165,4.61e-23,3;UBERON:0002062,4.61e-23,3;UBERON:0007280,4.61e-23,3;UBERON:0002084,3.16e-18,1;UBERON:0002082,3.16e-18,1;UBERON:0010226,3.16e-18,1;UBERON:0002146,4.44e-18,1;UBERON:0005623,4.44e-18,1;UBERON:0002079,7.37e-18,1;UBERON:0002135,8.72e-18,1;UBERON:0000948,2.22e-17,24;UBERON:0005498,2.22e-17,24;UBERON:0004140,2.22e-17,24;UBERON:0009881,2.22e-17,24;UBERON:0004141,2.22e-17,24;UBERON:0003084,2.22e-17,24;UBERON:0007005,2.22e-17,24;UBERON:0004139,2.22e-17,24;UBERON:0004291,2.22e-17,24;UBERON:0003103,1.26e-11,68;UBERON:0004797,1.85e-10,7;UBERON:0002081,1.33e-09,2;UBERON:0010227,1.33e-09,2;UBERON:0002133,1.44e-09,2;UBERON:0010313,1.37e-07,10;UBERON:0002342,1.37e-07,10;UBERON:0005062,1.37e-07,10;UBERON:0001009,7.04e-07,112 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0,0.145016693914229,0.93749290157711,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51354161145029,3.89572720819862,0,0.798716001995964,3.86303443322914,5.57928643604681,2.95607278941596,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,2.85878130549347,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80047199927361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0.952257725854961,0,0,0,0,0,0,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0,0.145016693914229,0.93749290157711,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51354161145029,3.89572720819862,0,0.798716001995964,3.86303443322914,5.57928643604681,2.95607278941596,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,2.85878130549347,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80047199927361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0.952257725854961,0,0,0,0,0,0,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:35085699..35085713,- | |||
}} | }} |
Latest revision as of 01:01, 25 July 2015
Short description: | p@chr15:35085699..35085713, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:35085699..35085713, - |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.57e-09 | 2 |
adipocyte of omentum tissue | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.25e-30 | 27 |
cardiac chamber | 3.29e-23 | 3 |
valve | 4.61e-23 | 3 |
cardiac mesenchyme | 4.61e-23 | 3 |
cardial valve | 4.61e-23 | 3 |
tunica intima | 4.61e-23 | 3 |
heart layer | 4.61e-23 | 3 |
endocardium | 4.61e-23 | 3 |
endocardial cushion | 4.61e-23 | 3 |
presumptive endocardium | 4.61e-23 | 3 |
heart left ventricle | 3.16e-18 | 1 |
cardiac ventricle | 3.16e-18 | 1 |
future cardiac ventricle | 3.16e-18 | 1 |
pulmonary valve | 4.44e-18 | 1 |
semi-lunar valve | 4.44e-18 | 1 |
left cardiac atrium | 7.37e-18 | 1 |
mitral valve | 8.72e-18 | 1 |
heart | 2.22e-17 | 24 |
primitive heart tube | 2.22e-17 | 24 |
primary heart field | 2.22e-17 | 24 |
anterior lateral plate mesoderm | 2.22e-17 | 24 |
heart tube | 2.22e-17 | 24 |
heart primordium | 2.22e-17 | 24 |
cardiac mesoderm | 2.22e-17 | 24 |
cardiogenic plate | 2.22e-17 | 24 |
heart rudiment | 2.22e-17 | 24 |
compound organ | 1.26e-11 | 68 |
blood vessel layer | 1.85e-10 | 7 |
cardiac atrium | 1.33e-09 | 2 |
future cardiac atrium | 1.33e-09 | 2 |
atrioventricular valve | 1.44e-09 | 2 |
neural crest-derived structure | 1.37e-07 | 10 |
neural crest | 1.37e-07 | 10 |
neural fold | 1.37e-07 | 10 |
circulatory system | 7.04e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.12e-09 | 2 |