FFCP PHASE1:Hg19::chr15:41136499..41136552,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:41136499..41136552,- | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_at_chr15:41136499..41136552,- | |||
|id=chr15:41136499..41136552,- | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-29!254;CL:0002076!7.08e-17!43;CL:0000223!6.10e-11!59;CL:0002251!1.04e-08!21;CL:0002368!6.06e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.16e-19;42!CL:0002368;6.98e-12;13!CL:0002251;4.46e-11;20!CL:0002202;4.20e-08;9!CL:0002632;4.20e-08;9!CL:1000507;1.21e-07;10!CL:1000494;1.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.00e-29,253;CL:0002076,2.07e-25,42;CL:0000223,1.31e-16,58;CL:0002368,4.86e-12,13;CL:0002251,2.90e-11,20;CL:0002202,2.69e-08,9;CL:0002632,2.69e-08,9;CL:1000507,1.66e-07,10;CL:1000494,1.66e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;7.65e-09;58 | |||
|ontology_enrichment_disease=DOID:305!2.12e-15!106;DOID:0050687!7.02e-10!143;DOID:1749!1.15e-09!14;DOID:299!7.36e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.18e-14;14!DOID:299;1.13e-09;25!DOID:5093;3.47e-07;4!DOID:1612;3.47e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.07e-14,106;DOID:1749,2.23e-14,14;DOID:0050687,9.64e-10,143;DOID:299,1.05e-09,25;DOID:5093,3.83e-07,4;DOID:1612,3.83e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.02e-15!169;UBERON:0000925!1.02e-15!169;UBERON:0006595!1.02e-15!169;UBERON:0001007!1.94e-12!155;UBERON:0001555!1.94e-12!155;UBERON:0007026!1.94e-12!155;UBERON:0001004!2.33e-12!72;UBERON:0000464!1.80e-11!104;UBERON:0004921!6.95e-11!129;UBERON:0004185!6.95e-11!129;UBERON:0001008!1.72e-09!45;UBERON:0000077!2.47e-09!130;UBERON:0006554!3.32e-09!44;UBERON:0000062!5.81e-09!511;UBERON:0005153!1.14e-08!37;UBERON:0000466!1.46e-08!126;UBERON:0000065!2.00e-08!53;UBERON:0005181!7.06e-08!35;UBERON:0000064!8.28e-08!219;UBERON:0005178!1.41e-07!34;UBERON:0002224!1.41e-07!34;UBERON:0000161!1.68e-07!35;UBERON:0005177!1.92e-07!107;UBERON:0005911!2.68e-07!82;UBERON:0000058!4.31e-07!26;UBERON:0000063!4.64e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.48e-11;33!UBERON:0005178;5.54e-09;34!UBERON:0002224;5.54e-09;34!UBERON:0005911;1.04e-08;36!UBERON:0004807;1.57e-08;22!UBERON:0001555;1.82e-08;54!UBERON:0006554;2.28e-08;30!UBERON:0001008;2.28e-08;30!UBERON:0005181;2.95e-08;35!UBERON:0005409;6.92e-08;22!UBERON:0004211;1.21e-07;10!UBERON:0009773;1.21e-07;10!UBERON:0001231;1.21e-07;10!UBERON:0004810;1.21e-07;10!UBERON:0002294;1.22e-07;7!UBERON:0001173;1.22e-07;7!UBERON:0000344;1.79e-07;20!UBERON:0000161;1.92e-07;19!UBERON:0000166;1.92e-07;19!UBERON:0000974;3.94e-07;6!UBERON:0002048;7.20e-07;22!UBERON:0000117;7.20e-07;22!UBERON:0000171;7.20e-07;22!UBERON:0000170;7.20e-07;22!UBERON:0007196;8.34e-07;15!UBERON:0001558;8.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.44e-20,160;UBERON:0000925,2.44e-20,160;UBERON:0006595,2.44e-20,160;UBERON:0001007,1.78e-16,145;UBERON:0001555,1.78e-16,145;UBERON:0007026,1.78e-16,145;UBERON:0004921,7.12e-13,118;UBERON:0001004,6.52e-12,74;UBERON:0005153,8.03e-11,37;UBERON:0006554,1.76e-10,47;UBERON:0001008,4.12e-10,48;UBERON:0005178,4.20e-10,34;UBERON:0002224,4.20e-10,34;UBERON:0005911,4.47e-10,82;UBERON:0005181,1.19e-09,35;UBERON:0005177,1.50e-09,101;UBERON:0000915,3.79e-09,52;UBERON:0005157,4.20e-09,47;UBERON:0009569,4.52e-09,112;UBERON:0000161,8.31e-08,36;UBERON:0000065,9.48e-08,54;UBERON:0000153,9.63e-08,62;UBERON:0007811,9.63e-08,62;UBERON:0000344,1.18e-07,20;UBERON:0000033,1.34e-07,56;UBERON:0004810,1.66e-07,10;UBERON:0001041,4.17e-07,87;UBERON:0007196,6.15e-07,15;UBERON:0001558,6.15e-07,15;UBERON:0002113,6.36e-07,26;UBERON:0003918,6.36e-07,26;UBERON:0011143,6.36e-07,26;UBERON:0005095,6.36e-07,26;UBERON:0007687,6.36e-07,26;UBERON:0000166,8.05e-07,22;UBERON:0002048,8.10e-07,22;UBERON:0000117,8.10e-07,22;UBERON:0000171,8.10e-07,22;UBERON:0000170,8.10e-07,22;UBERON:0005597,8.10e-07,22;UBERON:0000118,8.10e-07,22;UBERON:0006555,8.30e-07,16;UBERON:0004819,8.30e-07,16 | |||
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| |||
|short_description=p@chr15:41136499..41136552,- | |||
}} |
Latest revision as of 01:32, 25 July 2015
Short description: | p@chr15:41136499..41136552, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:41136499..41136552, - |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.00e-29 | 253 |
endo-epithelial cell | 2.07e-25 | 42 |
endodermal cell | 1.31e-16 | 58 |
respiratory epithelial cell | 4.86e-12 | 13 |
epithelial cell of alimentary canal | 2.90e-11 | 20 |
epithelial cell of tracheobronchial tree | 2.69e-08 | 9 |
epithelial cell of lower respiratory tract | 2.69e-08 | 9 |
kidney tubule cell | 1.66e-07 | 10 |
nephron tubule epithelial cell | 1.66e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.07e-14 | 106 |
squamous cell carcinoma | 2.23e-14 | 14 |
cell type cancer | 9.64e-10 | 143 |
adenocarcinoma | 1.05e-09 | 25 |
thoracic cancer | 3.83e-07 | 4 |
breast cancer | 3.83e-07 | 4 |