FFCP PHASE1:Hg19::chr15:63031476..63031492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:63031476..63031492,+ | |||
|description=CAGE_peak_at_chr15:63031476..63031492,+ | |description=CAGE_peak_at_chr15:63031476..63031492,+ | ||
|id=chr15:63031476..63031492,+ | |id=chr15:63031476..63031492,+ | ||
|ontology_enrichment_celltype=CL:0000192!2.12e-08!42;CL:0000514!2.12e-08!42;CL:0000359!1.43e-07!32;CL:0002539!5.82e-07!10 | |ontology_enrichment_celltype=CL:0000192!2.12e-08!42;CL:0000514!2.12e-08!42;CL:0000359!1.43e-07!32;CL:0002539!5.82e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.37e-17;19!CL:0002577;8.81e-09;3!CL:0000349;3.68e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.29e-17,19;CL:0002577,8.35e-09,3;CL:0000349,3.97e-07,19;CL:0000076,4.65e-07,63;CL:0000342,8.27e-07,1;CL:0002565,8.27e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.92e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.38e-08!312;UBERON:0000483!1.83e-08!309;UBERON:0003056!2.87e-07!61;UBERON:0004237!5.82e-07!10;UBERON:0004695!5.82e-07!10;UBERON:0002111!5.82e-07!10;UBERON:0004178!5.82e-07!10;UBERON:0003075!5.84e-07!86;UBERON:0007284!5.84e-07!86;UBERON:0004121!7.11e-07!169;UBERON:0000025!9.68e-07!194 | |ontology_enrichment_uberon=UBERON:0000119!1.38e-08!312;UBERON:0000483!1.83e-08!309;UBERON:0003056!2.87e-07!61;UBERON:0004237!5.82e-07!10;UBERON:0004695!5.82e-07!10;UBERON:0002111!5.82e-07!10;UBERON:0004178!5.82e-07!10;UBERON:0003075!5.84e-07!86;UBERON:0007284!5.84e-07!86;UBERON:0004121!7.11e-07!169;UBERON:0000025!9.68e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.57e-07;7!UBERON:0001987;8.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.98e-10,14;UBERON:0000158,8.98e-10,14;UBERON:0000305,1.84e-07,7;UBERON:0002506,8.27e-07,1;UBERON:0001769,8.27e-07,1;UBERON:0001987,8.52e-07,4;UBERON:0004340,8.52e-07,4;UBERON:0000941,9.25e-07,1;UBERON:0001785,9.25e-07,1;UBERON:0002464,9.25e-07,1;UBERON:0004904,9.25e-07,1;UBERON:0001021,9.25e-07,1;UBERON:0003902,9.25e-07,1;UBERON:0005425,9.25e-07,1 | |||
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| ||
|short_description=p@chr15:63031476..63031492,+ | |short_description=p@chr15:63031476..63031492,+ | ||
}} | }} |
Latest revision as of 03:09, 25 July 2015
Short description: | p@chr15:63031476..63031492, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:63031476..63031492, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.29e-17 | 19 |
placental epithelial cell | 8.35e-09 | 3 |
extraembryonic cell | 3.97e-07 | 19 |
squamous epithelial cell | 4.65e-07 | 63 |
pigment cell (sensu Vertebrata) | 8.27e-07 | 1 |
iris pigment epithelial cell | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.98e-10 | 14 |
membranous layer | 8.98e-10 | 14 |
amnion | 1.84e-07 | 7 |
iris epithelium | 8.27e-07 | 1 |
iris | 8.27e-07 | 1 |
placenta | 8.52e-07 | 4 |
allantois | 8.52e-07 | 4 |
cranial nerve II | 9.25e-07 | 1 |
cranial nerve | 9.25e-07 | 1 |
nerve trunk | 9.25e-07 | 1 |
nerve connecting eye with brain | 9.25e-07 | 1 |
nerve | 9.25e-07 | 1 |
retinal neural layer | 9.25e-07 | 1 |
presumptive neural retina | 9.25e-07 | 1 |