FFCP PHASE1:Hg19::chr15:81212487..81212506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:81212487..81212506,+ | |||
|coexpression_cluster_id=C387 | |coexpression_cluster_id=C387 | ||
|description=CAGE_peak_at_chr15:81212487..81212506,+ | |description=CAGE_peak_at_chr15:81212487..81212506,+ | ||
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|ontology_enrichment_celltype=CL:0000057!7.73e-25!75;CL:0000055!9.98e-18!180;CL:0002620!7.04e-11!23;CL:0000048!4.13e-09!430;CL:0000499!7.42e-09!27;CL:0000723!1.03e-08!436;CL:0000034!3.30e-08!444;CL:0002334!9.19e-08!12;CL:0002579!1.44e-07!3;CL:0002580!2.71e-07!3;CL:0000135!3.44e-07!3;CL:0000386!3.44e-07!3;CL:0000388!3.44e-07!3;CL:0002615!5.33e-07!3;CL:0000134!9.60e-07!358 | |ontology_enrichment_celltype=CL:0000057!7.73e-25!75;CL:0000055!9.98e-18!180;CL:0002620!7.04e-11!23;CL:0000048!4.13e-09!430;CL:0000499!7.42e-09!27;CL:0000723!1.03e-08!436;CL:0000034!3.30e-08!444;CL:0002334!9.19e-08!12;CL:0002579!1.44e-07!3;CL:0002580!2.71e-07!3;CL:0000135!3.44e-07!3;CL:0000386!3.44e-07!3;CL:0000388!3.44e-07!3;CL:0002615!5.33e-07!3;CL:0000134!9.60e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.66e-20;13!CL:0002579;3.30e-18;3!CL:0002580;2.23e-17;3!CL:0000135;6.01e-17;3!CL:0000388;6.01e-17;3!CL:0002615;8.33e-17;3!CL:0002334;1.27e-16;12!CL:0002617;1.91e-12;2!CL:0000511;4.18e-07;1!CL:0002625;4.18e-07;1!CL:0000216;4.18e-07;1!CL:0002616;5.89e-07;1 | |ontology_enrichment_celltype_v019=CL:0000136;3.66e-20;13!CL:0002579;3.30e-18;3!CL:0002580;2.23e-17;3!CL:0000135;6.01e-17;3!CL:0000388;6.01e-17;3!CL:0002615;8.33e-17;3!CL:0002334;1.27e-16;12!CL:0002617;1.91e-12;2!CL:0000511;4.18e-07;1!CL:0002625;4.18e-07;1!CL:0000216;4.18e-07;1!CL:0002616;5.89e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.51e-18,3;CL:0002580,2.00e-17,3;CL:0000136,2.57e-17,15;CL:0000057,3.62e-17,76;CL:0000135,3.89e-17,3;CL:0000388,3.89e-17,3;CL:0002334,1.25e-16,12;CL:0002615,1.29e-16,3;CL:0002617,1.61e-12,2;CL:0000511,4.18e-07,1;CL:0002625,4.18e-07,1;CL:0000216,4.18e-07,1;CL:0002616,5.26e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2513,9.25e-07,1;DOID:3369,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!6.62e-13!6;UBERON:0002358!6.62e-13!6;UBERON:0003684!6.62e-13!6;UBERON:0001178!6.62e-13!6;UBERON:0002199!2.31e-10!45;UBERON:0002416!2.31e-10!45;UBERON:0004457!2.67e-10!12;UBERON:0000042!2.67e-10!12;UBERON:0002097!1.58e-09!40;UBERON:0003102!3.09e-09!95;UBERON:0000043!3.44e-07!3 | |ontology_enrichment_uberon=UBERON:0003688!6.62e-13!6;UBERON:0002358!6.62e-13!6;UBERON:0003684!6.62e-13!6;UBERON:0001178!6.62e-13!6;UBERON:0002199!2.31e-10!45;UBERON:0002416!2.31e-10!45;UBERON:0004457!2.67e-10!12;UBERON:0000042!2.67e-10!12;UBERON:0002097!1.58e-09!40;UBERON:0003102!3.09e-09!95;UBERON:0000043!3.44e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.32e-33;6!UBERON:0002358;3.32e-33;6!UBERON:0003684;3.32e-33;6!UBERON:0001178;3.32e-33;6!UBERON:0004457;1.01e-29;9!UBERON:0000042;1.01e-29;9!UBERON:0007846;6.01e-17;3!UBERON:0000043;6.01e-17;3!UBERON:0007845;6.01e-17;3!UBERON:0000310;6.34e-14;10!UBERON:0001443;1.23e-12;11!UBERON:0001136;4.18e-07;1!UBERON:0001343;4.18e-07;1!UBERON:0004910;4.18e-07;1!UBERON:0004813;4.18e-07;1!UBERON:0004923;4.36e-07;55 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.32e-33;6!UBERON:0002358;3.32e-33;6!UBERON:0003684;3.32e-33;6!UBERON:0001178;3.32e-33;6!UBERON:0004457;1.01e-29;9!UBERON:0000042;1.01e-29;9!UBERON:0007846;6.01e-17;3!UBERON:0000043;6.01e-17;3!UBERON:0007845;6.01e-17;3!UBERON:0000310;6.34e-14;10!UBERON:0001443;1.23e-12;11!UBERON:0001136;4.18e-07;1!UBERON:0001343;4.18e-07;1!UBERON:0004910;4.18e-07;1!UBERON:0004813;4.18e-07;1!UBERON:0004923;4.36e-07;55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.50e-33,6;UBERON:0002358,5.50e-33,6;UBERON:0003684,5.50e-33,6;UBERON:0001178,5.50e-33,6;UBERON:0004457,5.28e-22,12;UBERON:0000042,5.28e-22,12;UBERON:0007846,3.89e-17,3;UBERON:0000043,3.89e-17,3;UBERON:0007845,3.89e-17,3;UBERON:0000310,5.56e-14,10;UBERON:0001443,1.09e-12,11;UBERON:0004923,5.43e-08,66;UBERON:0001136,4.18e-07,1;UBERON:0001343,4.18e-07,1;UBERON:0004910,4.18e-07,1;UBERON:0005154,4.18e-07,1;UBERON:0005295,4.18e-07,1;UBERON:0004813,4.18e-07,1;UBERON:0005297,4.18e-07,1;UBERON:0005294,4.18e-07,1;UBERON:0010141,4.18e-07,1;UBERON:0005891,4.18e-07,1 | |||
|phase1_expression=2.72517568905835,4.71021152560163,2.53717927372748,1.0007329835313,1.34088328328186,2.61701557230111,5.06599756336621,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,1.32409180813219,1.72101972449288,0,2.24271040056923,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,1.7308685049499,0,0,0,0,0,0.438977620880838,0.919463387397059,0.751190294532984,0,1.25572744982203,0.213557388818567,1.27159140695737,0,0.206105058476878,0.772921620136887,0.558350568994769,0.337552664482532,0.389748020644795,2.27190396819703,0.460249493211497,0.969876340912871,1.42003837006646,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,2.48107807818777,1.38115775959256,5.3325417942284,6.15067916427365,3.07024349440022,7.23842645146234,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,1.116475108079,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0,0,0,0.196498082026242,0,0,0.633322905892992,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0.889811221596536,0,0.756154618816195,0,0.443565449968902,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,1.389134845943,0,0,0,1.31570429747224,0.176689145945881,0.578742114812744,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,3.71995018166751,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr15:81212487..81212506,+ | |short_description=p@chr15:81212487..81212506,+ | ||
}} | }} |
Latest revision as of 04:49, 25 July 2015
Short description: | p@chr15:81212487..81212506, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81212487..81212506, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.51e-18 | 3 |
preadipocyte of the breast | 2.00e-17 | 3 |
fat cell | 2.57e-17 | 15 |
fibroblast | 3.62e-17 | 76 |
fibrocyte | 3.89e-17 | 3 |
tendon cell | 3.89e-17 | 3 |
preadipocyte | 1.25e-16 | 12 |
adipocyte of omentum tissue | 1.29e-16 | 3 |
adipocyte of breast | 1.61e-12 | 2 |
androgen binding protein secreting cell | 4.18e-07 | 1 |
seminiferous tubule epithelial cell | 4.18e-07 | 1 |
Sertoli cell | 4.18e-07 | 1 |
perirenal adipocyte cell | 5.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.50e-33 | 6 |
peritoneum | 5.50e-33 | 6 |
abdominal cavity | 5.50e-33 | 6 |
visceral peritoneum | 5.50e-33 | 6 |
cavity lining | 5.28e-22 | 12 |
serous membrane | 5.28e-22 | 12 |
dense regular connective tissue | 3.89e-17 | 3 |
tendon | 3.89e-17 | 3 |
regular connective tissue | 3.89e-17 | 3 |
breast | 5.56e-14 | 10 |
chest | 1.09e-12 | 11 |
organ component layer | 5.43e-08 | 66 |
mesothelium | 4.18e-07 | 1 |
seminiferous tubule of testis | 4.18e-07 | 1 |
epithelium of male gonad | 4.18e-07 | 1 |
epithelial cord | 4.18e-07 | 1 |
sex cord | 4.18e-07 | 1 |
seminiferous tubule epithelium | 4.18e-07 | 1 |
testis sex cord | 4.18e-07 | 1 |
genital ridge | 4.18e-07 | 1 |
primitive sex cord of indifferent gonad | 4.18e-07 | 1 |
coelomic epithelium | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.25e-07 | 1 |
peripheral primitive neuroectodermal tumor | 9.79e-07 | 1 |