FFCP PHASE1:Hg19::chr16:2867643..2867681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2867643..2867681,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr16:2867643..2867681,+ | |description=CAGE_peak_at_chr16:2867643..2867681,+ | ||
|id=chr16:2867643..2867681,+ | |id=chr16:2867643..2867681,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.86e-09!172;CL:0000566!3.86e-09!172;CL:0002032!1.76e-08!165;CL:0000837!1.76e-08!165;CL:0000988!7.61e-08!182;CL:0000791!1.78e-07!18;CL:0000789!1.78e-07!18;CL:0002420!1.78e-07!18;CL:0002419!1.78e-07!18;CL:0000790!1.78e-07!18;CL:0000084!8.96e-07!25;CL:0000827!8.96e-07!25 | |ontology_enrichment_celltype=CL:0000037!3.86e-09!172;CL:0000566!3.86e-09!172;CL:0002032!1.76e-08!165;CL:0000837!1.76e-08!165;CL:0000988!7.61e-08!182;CL:0000791!1.78e-07!18;CL:0000789!1.78e-07!18;CL:0002420!1.78e-07!18;CL:0002419!1.78e-07!18;CL:0000790!1.78e-07!18;CL:0000084!8.96e-07!25;CL:0000827!8.96e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.48e-07,108;CL:0000049,5.48e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.77e-11;29 | |||
|ontology_enrichment_disease=DOID:1240!7.60e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.69e-18;31!DOID:1240;2.80e-16;39!DOID:1036;4.40e-16;8!DOID:2531;6.99e-13;51!DOID:0060083;6.99e-13;51!DOID:3493;1.84e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.51e-22,39;DOID:8692,1.61e-19,31;DOID:2531,3.27e-18,51;DOID:0060083,3.27e-18,51;DOID:1036,4.71e-16,8;DOID:162,5.98e-13,235;DOID:14566,1.71e-12,239;DOID:305,9.01e-08,106;DOID:3493,1.22e-07,2;DOID:0050686,4.87e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.84e-14!9;UBERON:0001557!3.13e-10!19;UBERON:0000065!1.18e-09!53;UBERON:0008947!1.45e-09!38;UBERON:0003258!1.45e-09!38;UBERON:0000072!2.42e-09!46;UBERON:0001041!8.34e-08!98;UBERON:0001004!2.54e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.67e-34;9!UBERON:0001557;7.67e-34;9!UBERON:0000072;4.07e-11;37!UBERON:0000065;1.69e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.70e-34,9;UBERON:0001557,1.92e-18,19;UBERON:0008947,1.48e-11,38;UBERON:0003258,1.48e-11,38;UBERON:0000072,1.90e-10,47;UBERON:0000065,1.03e-08,54;UBERON:0001004,1.27e-07,74;UBERON:0001041,6.34e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,2.64240395401362,0,0,0.217010870715852,0,0,0,0.145398238779565,1.13362783106643,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,1.13477044938228,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,3.16060901730092,0.393419540227666,0,0,0,0.32592226663359,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0.493313713811028,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0.95569624297229,0.651083453856419,0.950452044448374,0,0.255973222308837,0,0.473554504088034,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,2.94702919869853,0,0,1.62273696827342,1.39303789839414,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,15.9714180053789,16.6898843177321,13.7376287033585,16.2132139916619,16.7767171951153,16.6089433377768,16.3145882873799,14.9128313495263,15.0051391209092,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81089489577993,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0,0,0.276242966807689,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,3.83010740264733,0,5.51857298466744,0,0,0,2.50634477090067,6.09450400085772,0,0,5.96184732766457,0,0,0,0,0,0,0,8.92503738970744,1.33228787199128,2.81974010175699,0,0,0,1.44876399560722,2.84136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.71507708151921,0,0,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0,0,5.63989151542952,5.48975096089671,6.37722030508202,3.03605972358696,8.10576552799931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,1.32930774541437,2.64793564700399,1.56966459203613,4.77889719091835,0,0,0,1.17590876897253,0,0,0,9.19185147246309,6.0664133181534,9.93597030343832,0.0969890164884194,0,0,0,0,0,0.782205530939212,0.0801588202515337,0,0,0,0,0.343189995723929,0,1.49103042678519,0.707082103850386,0,0,0,0,0,0.136905378891993,1.27746588066972,0,4.73197237702766,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,6.40321661844844,0,0,0,0,0,0,0,0.704815022316672,0.427149650270779,0,0,0.496166021811951,2.17372795087739,3.41019275466509,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0.245772908753719,0,0,3.73421053929493,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24142474360707,0,0,0,0,0,0.0752103283492573,0,0,0,0,2.21784129325568,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0.0852134047591577,0,0.22910686854405,0,0,0,1.57040373784389,1.70685094975177,0,0.102662806856247,0,0,0,0,0,0,0.659643100472575,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0,0.71421575442263,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,5.60762366814972,10.450601076091,0,0,0.426467963801962,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0.533636729388577,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,2.64240395401362,0,0,0.217010870715852,0,0,0,0.145398238779565,1.13362783106643,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,1.13477044938228,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,3.16060901730092,0.393419540227666,0,0,0,0.32592226663359,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0.493313713811028,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0.95569624297229,0.651083453856419,0.950452044448374,0,0.255973222308837,0,0.473554504088034,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,2.94702919869853,0,0,1.62273696827342,1.39303789839414,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,15.9714180053789,16.6898843177321,13.7376287033585,16.2132139916619,16.7767171951153,16.6089433377768,16.3145882873799,14.9128313495263,15.0051391209092,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81089489577993,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0,0,0.276242966807689,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,3.83010740264733,0,5.51857298466744,0,0,0,2.50634477090067,6.09450400085772,0,0,5.96184732766457,0,0,0,0,0,0,0,8.92503738970744,1.33228787199128,2.81974010175699,0,0,0,1.44876399560722,2.84136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.71507708151921,0,0,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0,0,5.63989151542952,5.48975096089671,6.37722030508202,3.03605972358696,8.10576552799931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,1.32930774541437,2.64793564700399,1.56966459203613,4.77889719091835,0,0,0,1.17590876897253,0,0,0,9.19185147246309,6.0664133181534,9.93597030343832,0.0969890164884194,0,0,0,0,0,0.782205530939212,0.0801588202515337,0,0,0,0,0.343189995723929,0,1.49103042678519,0.707082103850386,0,0,0,0,0,0.136905378891993,1.27746588066972,0,4.73197237702766,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,6.40321661844844,0,0,0,0,0,0,0,0.704815022316672,0.427149650270779,0,0,0.496166021811951,2.17372795087739,3.41019275466509,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0.245772908753719,0,0,3.73421053929493,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24142474360707,0,0,0,0,0,0.0752103283492573,0,0,0,0,2.21784129325568,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0.0852134047591577,0,0.22910686854405,0,0,0,1.57040373784389,1.70685094975177,0,0.102662806856247,0,0,0,0,0,0,0.659643100472575,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0,0.71421575442263,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,5.60762366814972,10.450601076091,0,0,0.426467963801962,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0.533636729388577,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr16:2867643..2867681,+ | |short_description=p@chr16:2867643..2867681,+ | ||
}} | }} |
Latest revision as of 07:42, 25 July 2015
Short description: | p@chr16:2867643..2867681, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2867643..2867681, + |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.48e-07 | 108 |
common myeloid progenitor | 5.48e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.70e-34 | 9 |
upper respiratory tract | 1.92e-18 | 19 |
respiratory primordium | 1.48e-11 | 38 |
endoderm of foregut | 1.48e-11 | 38 |
segment of respiratory tract | 1.90e-10 | 47 |
respiratory tract | 1.03e-08 | 54 |
respiratory system | 1.27e-07 | 74 |
foregut | 6.34e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.51e-22 | 39 |
myeloid leukemia | 1.61e-19 | 31 |
hematologic cancer | 3.27e-18 | 51 |
immune system cancer | 3.27e-18 | 51 |
chronic leukemia | 4.71e-16 | 8 |
cancer | 5.98e-13 | 235 |
disease of cellular proliferation | 1.71e-12 | 239 |
carcinoma | 9.01e-08 | 106 |
signet ring cell adenocarcinoma | 1.22e-07 | 2 |
organ system cancer | 4.87e-07 | 137 |